FFCP PHASE1:Hg19::chr12:52913641..52913652,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:52913641..52913652,+ | |||
|coexpression_cluster_id=C207 | |coexpression_cluster_id=C207 | ||
|description=CAGE_peak_at_chr12:52913641..52913652,+ | |description=CAGE_peak_at_chr12:52913641..52913652,+ | ||
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|ontology_enrichment_celltype=CL:0002076!5.62e-38!43;CL:0002368!2.27e-26!13;CL:0000223!4.87e-26!59;CL:0000066!1.46e-20!254;CL:0002251!6.25e-18!21;CL:0002159!4.17e-17!13;CL:0002202!8.56e-15!9;CL:0002632!8.56e-15!9;CL:0002328!2.79e-12!3;CL:0000068!5.02e-12!3;CL:0000069!5.02e-12!3;CL:0000307!5.02e-12!3;CL:0000377!5.02e-12!3;CL:0002621!1.33e-11!3;CL:0002166!4.93e-11!3;CL:0000240!1.84e-10!6;CL:0000311!1.84e-10!6;CL:0000079!1.84e-10!6;CL:0000237!1.84e-10!6;CL:0000036!1.84e-10!6;CL:0000357!1.84e-10!6;CL:0000114!1.84e-10!6;CL:0002327!3.97e-09!4;CL:0000575!7.66e-09!2;CL:0000244!1.25e-08!4;CL:0000731!1.25e-08!4;CL:0000220!2.39e-08!246;CL:0002321!3.21e-08!248;CL:0000076!4.29e-08!62;CL:0000312!1.57e-07!5;CL:0002077!2.18e-07!33 | |ontology_enrichment_celltype=CL:0002076!5.62e-38!43;CL:0002368!2.27e-26!13;CL:0000223!4.87e-26!59;CL:0000066!1.46e-20!254;CL:0002251!6.25e-18!21;CL:0002159!4.17e-17!13;CL:0002202!8.56e-15!9;CL:0002632!8.56e-15!9;CL:0002328!2.79e-12!3;CL:0000068!5.02e-12!3;CL:0000069!5.02e-12!3;CL:0000307!5.02e-12!3;CL:0000377!5.02e-12!3;CL:0002621!1.33e-11!3;CL:0002166!4.93e-11!3;CL:0000240!1.84e-10!6;CL:0000311!1.84e-10!6;CL:0000079!1.84e-10!6;CL:0000237!1.84e-10!6;CL:0000036!1.84e-10!6;CL:0000357!1.84e-10!6;CL:0000114!1.84e-10!6;CL:0002327!3.97e-09!4;CL:0000575!7.66e-09!2;CL:0000244!1.25e-08!4;CL:0000731!1.25e-08!4;CL:0000220!2.39e-08!246;CL:0002321!3.21e-08!248;CL:0000076!4.29e-08!62;CL:0000312!1.57e-07!5;CL:0002077!2.18e-07!33 | ||
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|ontology_enrichment_disease=DOID:1749!6.08e-11!14 | |ontology_enrichment_disease=DOID:1749!6.08e-11!14 | ||
|ontology_enrichment_disease_v019=DOID:3151;1.99e-09;1!DOID:3149;1.99e-09;1 | |ontology_enrichment_disease_v019=DOID:3151;1.99e-09;1!DOID:3149;1.99e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,2.46e-09,1;DOID:3149,2.46e-09,1 | |||
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| ||
|short_description=p@chr12:52913641..52913652,+ | |short_description=p@chr12:52913641..52913652,+ | ||
}} | }} |
Latest revision as of 09:38, 24 July 2015
Short description: | p@chr12:52913641..52913652, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52913641..52913652, + |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 4.10e-26 | 3 |
epithelium of bronchus | 4.10e-26 | 3 |
mammary gland | 2.44e-19 | 4 |
mammary bud | 2.44e-19 | 4 |
mammary ridge | 2.44e-19 | 4 |
mammary placode | 2.44e-19 | 4 |
bronchus | 6.37e-16 | 5 |
tracheobronchial tree | 3.85e-14 | 15 |
lower respiratory tract | 3.85e-14 | 15 |
gingival epithelium | 6.59e-12 | 3 |
epithelial fold | 1.81e-10 | 47 |
mouth mucosa | 2.51e-10 | 13 |
external ectoderm | 5.94e-10 | 8 |
cornea | 1.43e-09 | 4 |
eye surface | 1.43e-09 | 4 |
optic eminence | 1.43e-09 | 4 |
corneal primordium | 1.43e-09 | 4 |
simple columnar epithelium | 4.43e-09 | 9 |
thoracic cavity element | 1.61e-08 | 34 |
thoracic cavity | 1.61e-08 | 34 |
thoracic segment organ | 2.91e-08 | 35 |
respiratory system | 7.73e-08 | 74 |
epithelial bud | 9.94e-08 | 37 |
endoderm-derived structure | 1.16e-07 | 160 |
endoderm | 1.16e-07 | 160 |
presumptive endoderm | 1.16e-07 | 160 |
urothelium | 1.77e-07 | 5 |
respiratory system epithelium | 2.41e-07 | 28 |
surface structure | 7.27e-07 | 99 |
mucosa | 9.21e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.46e-09 | 1 |
keratoacanthoma | 2.46e-09 | 1 |