FFCP PHASE1:Hg19::chr12:58142093..58142107,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:58142093..58142107,- | |||
|coexpression_cluster_id=C181 | |coexpression_cluster_id=C181 | ||
|description=CAGE_peak_at_chr12:58142093..58142107,- | |description=CAGE_peak_at_chr12:58142093..58142107,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.07e-13;2!CL:0000242;1.07e-13;2!CL:0002577;1.41e-09;3!CL:0000306;1.69e-07;4!CL:0002222;1.69e-07;4!CL:0002224;1.69e-07;4 | |ontology_enrichment_celltype_v019=CL:0000123;1.07e-13;2!CL:0000242;1.07e-13;2!CL:0002577;1.41e-09;3!CL:0000306;1.69e-07;4!CL:0002222;1.69e-07;4!CL:0002224;1.69e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.21e-13,2;CL:0002577,1.19e-09,3;CL:0000306,1.69e-07,4;CL:0002222,1.69e-07,4;CL:0002224,1.69e-07,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!9.08e-09!235;DOID:14566!1.37e-08!239;DOID:0050687!1.11e-07!143 | |ontology_enrichment_disease=DOID:162!9.08e-09!235;DOID:14566!1.37e-08!239;DOID:0050687!1.11e-07!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;1.69e-07;4!UBERON:0010077;1.69e-07;4!UBERON:0005389;1.69e-07;4!UBERON:0000484;1.69e-07;4!UBERON:0000965;1.69e-07;4!UBERON:0001803;1.69e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001987;1.69e-07;4!UBERON:0010077;1.69e-07;4!UBERON:0005389;1.69e-07;4!UBERON:0000484;1.69e-07;4!UBERON:0000965;1.69e-07;4!UBERON:0001803;1.69e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,1.49e-07,4;UBERON:0004340,1.49e-07,4;UBERON:0010077,1.69e-07,4;UBERON:0005389,1.69e-07,4;UBERON:0000484,1.69e-07,4;UBERON:0002546,1.69e-07,4;UBERON:0000965,1.69e-07,4;UBERON:0001803,1.69e-07,4;UBERON:0003073,1.69e-07,4;UBERON:0005426,1.69e-07,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0.286235987131057,0.273748850145768,0,0,0.164201178899891,0,0,0,0,0,0,0,0.0774672005803016,0.284338464974843,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.25618263945135,0.130059347559878,0.493313713811028,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0.728590576585084,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0.570471821544449,0,0.352303495931295,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,1.09493207722749,0,0,0,0,0.721879481669586,0.236613600079688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.219500570817251,0,0.100528972411631,0.0925884451585296,0,0,1.44331342025273,0,0,0.433099343283221,0,0.380508304469197,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0,0.258543431515556,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0.434343920002738,0,0,0.336255431980582,0,0,0,0,0,1.54657762555539,0.167516265334349,0,0,0,0,0,0,0.542530047399471,0,0.535286966391485,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0.303127571446259,1.66435439510497,0,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0,0,0.164254312027618,0.519254429183621,0.116210378459959,0.241718899183244,0,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0.290012154876366,0.154048617114644,0,0.137836572484531,0,0,0.0852266274161009,0.178064071293475,0,0,0.255225424989168,0.10115778085555,0.464845549297286,0,0.6970372701606,0,0.532306030317022,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0,0.404364963146632,0,0,0,0,0,0,0.282810863907425,0,0,0.66343897524122,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0,0.35667105148125,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0.929015875628594,0,0.0711418433484141,0.318852545457645,0,0,0.423347165447766,0.324621940274555,0,0.684704037099577,0.313359791546046,0,0,0,0.201799707191048,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0.334330152832435,0.568272293612826,0,0.296964680832639,0,0,0,0,0.16480387422676,0,0,0,0,0.102268682502155,0,0.311039587661807,0.179736702294654,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0.227586896570999,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0,0,0.113942055847001,0,0,0.108647371922008,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0.104421949505455,0,0,0,0.547364367646998,0,0.485560759068186,0,0,0.30607276163049,0,0,0.311064574191741,0,0.330991955875499,0,0,0,0.277349346026277,0,0.0979923974143777,0.174118413160805,0,0,0.0967563312890851,0.0730893170861856,0.246346371159628,0,0,0,0.274083849293502,0,0,0,0,0,0.19980960958213,0,0.114536596165916,0.171594997861965,0.14405479798815,0,0.235694034616795,0,0,0.101998217636322,0.288950589901519,0,0.136905378891993,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0.202210631562555,0.393709926058995,0,0,0,0.160753148465019,0.412618309791701,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.20095317641277,0,0,0,0.129282956361551,0.13223260174269,0.171086837884329,0,0.106787412567695,0.157204305099666,0,0,0.197611631897944,0.487170393523584,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0.249960815924213,0.151649117541648,0.570930667089935,0.235265819698172,1.40500471742064,0.144921028610825,0.149254802886874,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0.310525913752519,0,0,0,0,0,1.22061219961398,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0.226705925512272,0,0.244736704506468,0,0,0,0.353378291891762,0,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0.655219697692825,0.491545817507439,0,0,0.426766918776564,0.172214979660816,0,0,0,0,0,0,0.471797825567689,0.109209638192014,0.33946505990805,0,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0.163771917510097,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0.455324382702595,0,0,0.171488009437418,0,0.0657727735628491,0.118193840883968,0.333694205676207,0,0,0,0.913158720509496,0,1.9110067515482,0.0714765441766563,0.158013611732727,0.116241425368125,0.173858272302579,0.801711364730253,0,0,0,0,0.354996002191696,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0.118920090777569,0,0,0.603851374266694,0,0,0,0,0.235676547101626,0,0,0,0,0.0939839179798536,0,0,0,0,0.160482733378337,0,0,0,0.473314686579554,0,0.436350690340377,0.5290268405154,0,0,0.432626562123789,0.126166424835079,0,0.253397002022874,0.203977659483963,0,0.0918948995348449,0,0,0,0.829169439458779,0.103432995861895,0,0,0.0645889098360061,0.0620747142958579,0.224263725161227,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0.320182037633146,0,0.0898252021065869,0,0.244482888365733,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0.286235987131057,0.273748850145768,0,0,0.164201178899891,0,0,0,0,0,0,0,0.0774672005803016,0.284338464974843,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.25618263945135,0.130059347559878,0.493313713811028,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0.221729397462564,0,0,0.728590576585084,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0.570471821544449,0,0.352303495931295,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,1.09493207722749,0,0,0,0,0.721879481669586,0.236613600079688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.219500570817251,0,0.100528972411631,0.0925884451585296,0,0,1.44331342025273,0,0,0.433099343283221,0,0.380508304469197,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0,0.258543431515556,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0.434343920002738,0,0,0.336255431980582,0,0,0,0,0,1.54657762555539,0.167516265334349,0,0,0,0,0,0,0.542530047399471,0,0.535286966391485,0.157702415033935,0.234282829985426,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0.303127571446259,1.66435439510497,0,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0,0,0.164254312027618,0.519254429183621,0.116210378459959,0.241718899183244,0,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0.290012154876366,0.154048617114644,0,0.137836572484531,0,0,0.0852266274161009,0.178064071293475,0,0,0.255225424989168,0.10115778085555,0.464845549297286,0,0.6970372701606,0,0.532306030317022,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0,0.404364963146632,0,0,0,0,0,0,0.282810863907425,0,0,0.66343897524122,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0,0.35667105148125,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0.929015875628594,0,0.0711418433484141,0.318852545457645,0,0,0.423347165447766,0.324621940274555,0,0.684704037099577,0.313359791546046,0,0,0,0.201799707191048,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0.121360521749513,0.334330152832435,0.568272293612826,0,0.296964680832639,0,0,0,0,0.16480387422676,0,0,0,0,0.102268682502155,0,0.311039587661807,0.179736702294654,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0.227586896570999,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0,0,0.113942055847001,0,0,0.108647371922008,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0.104421949505455,0,0,0,0.547364367646998,0,0.485560759068186,0,0,0.30607276163049,0,0,0.311064574191741,0,0.330991955875499,0,0,0,0.277349346026277,0,0.0979923974143777,0.174118413160805,0,0,0.0967563312890851,0.0730893170861856,0.246346371159628,0,0,0,0.274083849293502,0,0,0,0,0,0.19980960958213,0,0.114536596165916,0.171594997861965,0.14405479798815,0,0.235694034616795,0,0,0.101998217636322,0.288950589901519,0,0.136905378891993,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0.202210631562555,0.393709926058995,0,0,0,0.160753148465019,0.412618309791701,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.20095317641277,0,0,0,0.129282956361551,0.13223260174269,0.171086837884329,0,0.106787412567695,0.157204305099666,0,0,0.197611631897944,0.487170393523584,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0.249960815924213,0.151649117541648,0.570930667089935,0.235265819698172,1.40500471742064,0.144921028610825,0.149254802886874,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0.310525913752519,0,0,0,0,0,1.22061219961398,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0.226705925512272,0,0.244736704506468,0,0,0,0.353378291891762,0,0.168942440653073,0,0,0,0.138258436151731,0,0,0,0.655219697692825,0.491545817507439,0,0,0.426766918776564,0.172214979660816,0,0,0,0,0,0,0.471797825567689,0.109209638192014,0.33946505990805,0,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0.163771917510097,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0.455324382702595,0,0,0.171488009437418,0,0.0657727735628491,0.118193840883968,0.333694205676207,0,0,0,0.913158720509496,0,1.9110067515482,0.0714765441766563,0.158013611732727,0.116241425368125,0.173858272302579,0.801711364730253,0,0,0,0,0.354996002191696,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0.118920090777569,0,0,0.603851374266694,0,0,0,0,0.235676547101626,0,0,0,0,0.0939839179798536,0,0,0,0,0.160482733378337,0,0,0,0.473314686579554,0,0.436350690340377,0.5290268405154,0,0,0.432626562123789,0.126166424835079,0,0.253397002022874,0.203977659483963,0,0.0918948995348449,0,0,0,0.829169439458779,0.103432995861895,0,0,0.0645889098360061,0.0620747142958579,0.224263725161227,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0.320182037633146,0,0.0898252021065869,0,0.244482888365733,0,0,0,0 | ||
|short_description=p@chr12:58142093..58142107,- | |short_description=p@chr12:58142093..58142107,- | ||
}} | }} |
Latest revision as of 10:57, 24 July 2015
Short description: | p@chr12:58142093..58142107, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:58142093..58142107, - |
Coexpression cluster: | C181_liposarcoma_somatostatinoma_neuroblastoma_mesothelioma_nonsmall_small_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.21e-13 | 2 |
placental epithelial cell | 1.19e-09 | 3 |
crystallin accumulating cell | 1.69e-07 | 4 |
vertebrate lens cell | 1.69e-07 | 4 |
lens epithelial cell | 1.69e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
placenta | 1.49e-07 | 4 |
allantois | 1.49e-07 | 4 |
cuboidal epithelium | 1.69e-07 | 4 |
transparent eye structure | 1.69e-07 | 4 |
simple cuboidal epithelium | 1.69e-07 | 4 |
cranial placode | 1.69e-07 | 4 |
lens of camera-type eye | 1.69e-07 | 4 |
epithelium of lens | 1.69e-07 | 4 |
lens placode | 1.69e-07 | 4 |
lens vesicle | 1.69e-07 | 4 |