FFCP PHASE1:Hg19::chr12:63025600..63025629,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:63025600..63025629,+
|short_description=p@chr12:63025600..63025629,+
|description=CAGE_peak_at_chr12:63025600..63025629,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:63025600..63025629,+ | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_at_chr12:63025600..63025629,+ | |||
|id=chr12:63025600..63025629,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.79e-23!180;CL:0000710!3.86e-14!20;CL:0000148!5.80e-13!10;CL:0000541!5.80e-13!10;CL:0000075!4.10e-11!27;CL:0000680!3.53e-10!57;CL:0000056!3.53e-10!57;CL:0000355!3.53e-10!57;CL:0000359!5.55e-10!32;CL:0000192!5.66e-09!42;CL:0000514!5.66e-09!42;CL:0000187!7.26e-09!54;CL:0000147!9.36e-09!14;CL:0002567!6.85e-08!3;CL:0000183!1.06e-07!59;CL:0002595!1.52e-07!5;CL:0000393!1.71e-07!60;CL:0000211!1.71e-07!60;CL:0002077!2.74e-07!33;CL:0000057!6.61e-07!75;CL:0000133!8.19e-07!59;CL:0002620!9.98e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002567;6.28e-51;3!CL:0000148;1.62e-41;10!CL:0002593;1.38e-33;2!CL:0002595;5.20e-30;5!CL:0000147;9.87e-30;14!CL:0000710;7.15e-21;20!CL:0000075;1.70e-15;27!CL:0000359;8.78e-13;32!CL:0002077;9.51e-11;34!CL:0000192;5.85e-08;43!CL:0002539;1.67e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,6.85e-51,3;CL:0000148,1.56e-41,10;CL:0000541,1.56e-41,10;CL:0002593,1.64e-33,2;CL:0002595,6.35e-30,5;CL:0000147,9.58e-30,14;CL:0000710,7.01e-21,20;CL:0000075,1.68e-15,27;CL:0000359,7.53e-13,32;CL:0002077,2.51e-12,34;CL:0000333,9.39e-10,41;CL:0000192,1.42e-09,43;CL:0000514,1.42e-09,43;CL:0002539,1.62e-07,10;CL:0000187,1.74e-07,55;CL:0000680,4.26e-07,58;CL:0000056,4.26e-07,58;CL:0000355,4.26e-07,58;CL:0002321,4.93e-07,250;CL:0000133,7.19e-07,59;CL:0000393,9.55e-07,61;CL:0000211,9.55e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;5.85e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!2.05e-10!82;UBERON:0004290!3.41e-10!70;UBERON:0000914!2.12e-09!83;UBERON:0002329!2.12e-09!83;UBERON:0003077!2.12e-09!83;UBERON:0003059!2.12e-09!83;UBERON:0007282!2.12e-09!83;UBERON:0009618!2.12e-09!83;UBERON:0007285!2.12e-09!83;UBERON:0001134!3.80e-09!61;UBERON:0002036!3.80e-09!61;UBERON:0003082!3.80e-09!61;UBERON:0001637!4.55e-09!42;UBERON:0003509!4.55e-09!42;UBERON:0004572!4.55e-09!42;UBERON:0002385!1.11e-08!63;UBERON:0001015!1.11e-08!63;UBERON:0000383!1.11e-08!63;UBERON:0004573!3.53e-08!33;UBERON:0004571!3.53e-08!33;UBERON:0003834!1.52e-07!5;UBERON:0001533!1.52e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;1.38e-33;2!UBERON:0003834;5.20e-30;5!UBERON:0001533;5.20e-30;5!UBERON:0003513;1.16e-21;7!UBERON:0004573;1.58e-09;33!UBERON:0004571;1.58e-09;33!UBERON:0001637;4.58e-08;42!UBERON:0003509;4.58e-08;42!UBERON:0004572;4.58e-08;42!UBERON:0004237;1.67e-07;10!UBERON:0004695;1.67e-07;10!UBERON:0002111;1.67e-07;10!UBERON:0004178;1.67e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,1.64e-33,2;UBERON:0003834,6.35e-30,5;UBERON:0001533,6.35e-30,5;UBERON:0003513,1.34e-21,7;UBERON:0004573,1.84e-12,33;UBERON:0004571,1.84e-12,33;UBERON:0001637,8.39e-10,42;UBERON:0003509,8.39e-10,42;UBERON:0004572,8.39e-10,42;UBERON:0004237,1.62e-07,10;UBERON:0004695,1.62e-07,10;UBERON:0002111,1.62e-07,10;UBERON:0004178,1.62e-07,10;UBERON:0007500,5.62e-07,59;UBERON:0001981,5.62e-07,59;UBERON:0004537,5.62e-07,59;UBERON:0006965,5.62e-07,59 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0.795285947051099,0.973269740605272,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0.280901613404497,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0,0,0,0.635795703478686,0.900273288253207,0.309157587715317,0.772921620136887,0,0,0,0,0.460249493211497,0,0,0.201504196455281,0.169560592310488,0,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698476837213859,4.58386110669933,12.8939191931052,8.55362230113526,1.13110241973656,1.20137223137567,0.285826432630578,0,0,0,0,3.57656445851882,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0.256278298511402,0,0,0,0.308419387605311,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0,0.15350367472613,0,0,0,0,0.0890320356467374,0,0.192190067365106,0,0,0,0,1.3940745403212,0,1.06461206063404,0.869932992075073,0.74129687641568,0,0,0,0,0,0,0.95460974377781,0.78494864019923,0,0,0,0.202182481573316,0,0.421258456238981,0,1.21856744815642,1.05650146756755,0,0.141405431953713,0,1.10273068709225,0,0.438450885253763,0,0,0.405820753925408,0.30982349809975,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442317039724898,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0.147855149989634,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0,4.65630986811867,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.244482888365733,0,0,0,0 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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0.795285947051099,0.973269740605272,0.0945348171640679,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0.280901613404497,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0,0,0,0.635795703478686,0.900273288253207,0.309157587715317,0.772921620136887,0,0,0,0,0.460249493211497,0,0,0.201504196455281,0.169560592310488,0,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698476837213859,4.58386110669933,12.8939191931052,8.55362230113526,1.13110241973656,1.20137223137567,0.285826432630578,0,0,0,0,3.57656445851882,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0,0.256278298511402,0,0,0,0.308419387605311,0,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0,0.15350367472613,0,0,0,0,0.0890320356467374,0,0.192190067365106,0,0,0,0,1.3940745403212,0,1.06461206063404,0.869932992075073,0.74129687641568,0,0,0,0,0,0,0.95460974377781,0.78494864019923,0,0,0,0.202182481573316,0,0.421258456238981,0,1.21856744815642,1.05650146756755,0,0.141405431953713,0,1.10273068709225,0,0.438450885253763,0,0,0.405820753925408,0.30982349809975,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442317039724898,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0.149254802886874,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0.147855149989634,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0,4.65630986811867,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p@chr12:63025600..63025629,+ | |||
}} | }} |
Latest revision as of 11:09, 24 July 2015
Short description: | p@chr12:63025600..63025629, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:63025600..63025629, + |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 6.85e-51 | 3 |
melanocyte | 1.56e-41 | 10 |
melanoblast | 1.56e-41 | 10 |
smooth muscle cell of the internal thoracic artery | 1.64e-33 | 2 |
smooth muscle cell of the subclavian artery | 6.35e-30 | 5 |
pigment cell | 9.58e-30 | 14 |
neurecto-epithelial cell | 7.01e-21 | 20 |
columnar/cuboidal epithelial cell | 1.68e-15 | 27 |
vascular associated smooth muscle cell | 7.53e-13 | 32 |
ecto-epithelial cell | 2.51e-12 | 34 |
migratory neural crest cell | 9.39e-10 | 41 |
smooth muscle cell | 1.42e-09 | 43 |
smooth muscle myoblast | 1.42e-09 | 43 |
aortic smooth muscle cell | 1.62e-07 | 10 |
muscle cell | 1.74e-07 | 55 |
muscle precursor cell | 4.26e-07 | 58 |
myoblast | 4.26e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.26e-07 | 58 |
embryonic cell | 4.93e-07 | 250 |
neurectodermal cell | 7.19e-07 | 59 |
electrically responsive cell | 9.55e-07 | 61 |
electrically active cell | 9.55e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 1.64e-33 | 2 |
thoracic segment blood vessel | 6.35e-30 | 5 |
subclavian artery | 6.35e-30 | 5 |
trunk blood vessel | 1.34e-21 | 7 |
systemic artery | 1.84e-12 | 33 |
systemic arterial system | 1.84e-12 | 33 |
artery | 8.39e-10 | 42 |
arterial blood vessel | 8.39e-10 | 42 |
arterial system | 8.39e-10 | 42 |
blood vessel smooth muscle | 1.62e-07 | 10 |
arterial system smooth muscle | 1.62e-07 | 10 |
artery smooth muscle tissue | 1.62e-07 | 10 |
aorta smooth muscle tissue | 1.62e-07 | 10 |
epithelial tube open at both ends | 5.62e-07 | 59 |
blood vessel | 5.62e-07 | 59 |
blood vasculature | 5.62e-07 | 59 |
vascular cord | 5.62e-07 | 59 |