FFCP PHASE1:Hg19::chr12:63025600..63025629,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:63025600..63025629,+ | |||
|coexpression_cluster_id=C88 | |coexpression_cluster_id=C88 | ||
|description=CAGE_peak_at_chr12:63025600..63025629,+ | |description=CAGE_peak_at_chr12:63025600..63025629,+ | ||
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|ontology_enrichment_celltype=CL:0000055!5.79e-23!180;CL:0000710!3.86e-14!20;CL:0000148!5.80e-13!10;CL:0000541!5.80e-13!10;CL:0000075!4.10e-11!27;CL:0000680!3.53e-10!57;CL:0000056!3.53e-10!57;CL:0000355!3.53e-10!57;CL:0000359!5.55e-10!32;CL:0000192!5.66e-09!42;CL:0000514!5.66e-09!42;CL:0000187!7.26e-09!54;CL:0000147!9.36e-09!14;CL:0002567!6.85e-08!3;CL:0000183!1.06e-07!59;CL:0002595!1.52e-07!5;CL:0000393!1.71e-07!60;CL:0000211!1.71e-07!60;CL:0002077!2.74e-07!33;CL:0000057!6.61e-07!75;CL:0000133!8.19e-07!59;CL:0002620!9.98e-07!23 | |ontology_enrichment_celltype=CL:0000055!5.79e-23!180;CL:0000710!3.86e-14!20;CL:0000148!5.80e-13!10;CL:0000541!5.80e-13!10;CL:0000075!4.10e-11!27;CL:0000680!3.53e-10!57;CL:0000056!3.53e-10!57;CL:0000355!3.53e-10!57;CL:0000359!5.55e-10!32;CL:0000192!5.66e-09!42;CL:0000514!5.66e-09!42;CL:0000187!7.26e-09!54;CL:0000147!9.36e-09!14;CL:0002567!6.85e-08!3;CL:0000183!1.06e-07!59;CL:0002595!1.52e-07!5;CL:0000393!1.71e-07!60;CL:0000211!1.71e-07!60;CL:0002077!2.74e-07!33;CL:0000057!6.61e-07!75;CL:0000133!8.19e-07!59;CL:0002620!9.98e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002567;6.28e-51;3!CL:0000148;1.62e-41;10!CL:0002593;1.38e-33;2!CL:0002595;5.20e-30;5!CL:0000147;9.87e-30;14!CL:0000710;7.15e-21;20!CL:0000075;1.70e-15;27!CL:0000359;8.78e-13;32!CL:0002077;9.51e-11;34!CL:0000192;5.85e-08;43!CL:0002539;1.67e-07;10 | |ontology_enrichment_celltype_v019=CL:0002567;6.28e-51;3!CL:0000148;1.62e-41;10!CL:0002593;1.38e-33;2!CL:0002595;5.20e-30;5!CL:0000147;9.87e-30;14!CL:0000710;7.15e-21;20!CL:0000075;1.70e-15;27!CL:0000359;8.78e-13;32!CL:0002077;9.51e-11;34!CL:0000192;5.85e-08;43!CL:0002539;1.67e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002567,6.85e-51,3;CL:0000148,1.56e-41,10;CL:0000541,1.56e-41,10;CL:0002593,1.64e-33,2;CL:0002595,6.35e-30,5;CL:0000147,9.58e-30,14;CL:0000710,7.01e-21,20;CL:0000075,1.68e-15,27;CL:0000359,7.53e-13,32;CL:0002077,2.51e-12,34;CL:0000333,9.39e-10,41;CL:0000192,1.42e-09,43;CL:0000514,1.42e-09,43;CL:0002539,1.62e-07,10;CL:0000187,1.74e-07,55;CL:0000680,4.26e-07,58;CL:0000056,4.26e-07,58;CL:0000355,4.26e-07,58;CL:0002321,4.93e-07,250;CL:0000133,7.19e-07,59;CL:0000393,9.55e-07,61;CL:0000211,9.55e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;5.85e-08;43 | |ontology_enrichment_development_v019=CL:0000514;5.85e-08;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!2.05e-10!82;UBERON:0004290!3.41e-10!70;UBERON:0000914!2.12e-09!83;UBERON:0002329!2.12e-09!83;UBERON:0003077!2.12e-09!83;UBERON:0003059!2.12e-09!83;UBERON:0007282!2.12e-09!83;UBERON:0009618!2.12e-09!83;UBERON:0007285!2.12e-09!83;UBERON:0001134!3.80e-09!61;UBERON:0002036!3.80e-09!61;UBERON:0003082!3.80e-09!61;UBERON:0001637!4.55e-09!42;UBERON:0003509!4.55e-09!42;UBERON:0004572!4.55e-09!42;UBERON:0002385!1.11e-08!63;UBERON:0001015!1.11e-08!63;UBERON:0000383!1.11e-08!63;UBERON:0004573!3.53e-08!33;UBERON:0004571!3.53e-08!33;UBERON:0003834!1.52e-07!5;UBERON:0001533!1.52e-07!5 | |ontology_enrichment_uberon=UBERON:0000486!2.05e-10!82;UBERON:0004290!3.41e-10!70;UBERON:0000914!2.12e-09!83;UBERON:0002329!2.12e-09!83;UBERON:0003077!2.12e-09!83;UBERON:0003059!2.12e-09!83;UBERON:0007282!2.12e-09!83;UBERON:0009618!2.12e-09!83;UBERON:0007285!2.12e-09!83;UBERON:0001134!3.80e-09!61;UBERON:0002036!3.80e-09!61;UBERON:0003082!3.80e-09!61;UBERON:0001637!4.55e-09!42;UBERON:0003509!4.55e-09!42;UBERON:0004572!4.55e-09!42;UBERON:0002385!1.11e-08!63;UBERON:0001015!1.11e-08!63;UBERON:0000383!1.11e-08!63;UBERON:0004573!3.53e-08!33;UBERON:0004571!3.53e-08!33;UBERON:0003834!1.52e-07!5;UBERON:0001533!1.52e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002456;1.38e-33;2!UBERON:0003834;5.20e-30;5!UBERON:0001533;5.20e-30;5!UBERON:0003513;1.16e-21;7!UBERON:0004573;1.58e-09;33!UBERON:0004571;1.58e-09;33!UBERON:0001637;4.58e-08;42!UBERON:0003509;4.58e-08;42!UBERON:0004572;4.58e-08;42!UBERON:0004237;1.67e-07;10!UBERON:0004695;1.67e-07;10!UBERON:0002111;1.67e-07;10!UBERON:0004178;1.67e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0002456;1.38e-33;2!UBERON:0003834;5.20e-30;5!UBERON:0001533;5.20e-30;5!UBERON:0003513;1.16e-21;7!UBERON:0004573;1.58e-09;33!UBERON:0004571;1.58e-09;33!UBERON:0001637;4.58e-08;42!UBERON:0003509;4.58e-08;42!UBERON:0004572;4.58e-08;42!UBERON:0004237;1.67e-07;10!UBERON:0004695;1.67e-07;10!UBERON:0002111;1.67e-07;10!UBERON:0004178;1.67e-07;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,1.64e-33,2;UBERON:0003834,6.35e-30,5;UBERON:0001533,6.35e-30,5;UBERON:0003513,1.34e-21,7;UBERON:0004573,1.84e-12,33;UBERON:0004571,1.84e-12,33;UBERON:0001637,8.39e-10,42;UBERON:0003509,8.39e-10,42;UBERON:0004572,8.39e-10,42;UBERON:0004237,1.62e-07,10;UBERON:0004695,1.62e-07,10;UBERON:0002111,1.62e-07,10;UBERON:0004178,1.62e-07,10;UBERON:0007500,5.62e-07,59;UBERON:0001981,5.62e-07,59;UBERON:0004537,5.62e-07,59;UBERON:0006965,5.62e-07,59 | |||
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|short_description=p@chr12:63025600..63025629,+ | |short_description=p@chr12:63025600..63025629,+ | ||
}} | }} |
Latest revision as of 11:09, 24 July 2015
Short description: | p@chr12:63025600..63025629, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:63025600..63025629, + |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 6.85e-51 | 3 |
melanocyte | 1.56e-41 | 10 |
melanoblast | 1.56e-41 | 10 |
smooth muscle cell of the internal thoracic artery | 1.64e-33 | 2 |
smooth muscle cell of the subclavian artery | 6.35e-30 | 5 |
pigment cell | 9.58e-30 | 14 |
neurecto-epithelial cell | 7.01e-21 | 20 |
columnar/cuboidal epithelial cell | 1.68e-15 | 27 |
vascular associated smooth muscle cell | 7.53e-13 | 32 |
ecto-epithelial cell | 2.51e-12 | 34 |
migratory neural crest cell | 9.39e-10 | 41 |
smooth muscle cell | 1.42e-09 | 43 |
smooth muscle myoblast | 1.42e-09 | 43 |
aortic smooth muscle cell | 1.62e-07 | 10 |
muscle cell | 1.74e-07 | 55 |
muscle precursor cell | 4.26e-07 | 58 |
myoblast | 4.26e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.26e-07 | 58 |
embryonic cell | 4.93e-07 | 250 |
neurectodermal cell | 7.19e-07 | 59 |
electrically responsive cell | 9.55e-07 | 61 |
electrically active cell | 9.55e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 1.64e-33 | 2 |
thoracic segment blood vessel | 6.35e-30 | 5 |
subclavian artery | 6.35e-30 | 5 |
trunk blood vessel | 1.34e-21 | 7 |
systemic artery | 1.84e-12 | 33 |
systemic arterial system | 1.84e-12 | 33 |
artery | 8.39e-10 | 42 |
arterial blood vessel | 8.39e-10 | 42 |
arterial system | 8.39e-10 | 42 |
blood vessel smooth muscle | 1.62e-07 | 10 |
arterial system smooth muscle | 1.62e-07 | 10 |
artery smooth muscle tissue | 1.62e-07 | 10 |
aorta smooth muscle tissue | 1.62e-07 | 10 |
epithelial tube open at both ends | 5.62e-07 | 59 |
blood vessel | 5.62e-07 | 59 |
blood vasculature | 5.62e-07 | 59 |
vascular cord | 5.62e-07 | 59 |