FFCP PHASE1:Hg19::chr12:65902388..65902392,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:65902388..65902392,- | |||
|description=CAGE_peak_at_chr12:65902388..65902392,- | |description=CAGE_peak_at_chr12:65902388..65902392,- | ||
|id=chr12:65902388..65902392,- | |id=chr12:65902388..65902392,- | ||
|ontology_enrichment_celltype=CL:0000047!8.95e-08!8 | |ontology_enrichment_celltype=CL:0000047!8.95e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.57e-17;6!CL:0000404;1.57e-17;6!CL:0002319;4.27e-15;25!CL:0000047;1.21e-13;2 | |ontology_enrichment_celltype_v019=CL:0000540;1.57e-17;6!CL:0000404;1.57e-17;6!CL:0002319;4.27e-15;25!CL:0000047;1.21e-13;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.97e-28,8;CL:0000540,1.57e-17,6;CL:0000031,1.57e-17,6;CL:0000404,1.57e-17,6;CL:0002319,3.96e-15,25;CL:0000133,6.36e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.27e-33;3!UBERON:0005425;7.62e-26;1!CL:0000031;1.57e-17;6 | |ontology_enrichment_development_v019=UBERON:0003056;1.27e-33;3!UBERON:0005425;7.62e-26;1!CL:0000031;1.57e-17;6 | ||
|ontology_enrichment_disease_v019=DOID:4556;1.10e-09;3 | |ontology_enrichment_disease_v019=DOID:4556;1.10e-09;3 | ||
|ontology_enrichment_disease_v019_2=DOID:4556,1.10e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0003978!1.91e-11!3;UBERON:0009751!1.91e-11!3;UBERON:0000946!1.91e-11!3;UBERON:0002523!1.91e-11!3;UBERON:0005983!1.91e-11!3;UBERON:0002165!1.91e-11!3;UBERON:0002062!1.91e-11!3;UBERON:0007280!1.91e-11!3;UBERON:0002133!2.40e-08!2 | |ontology_enrichment_uberon=UBERON:0003978!1.91e-11!3;UBERON:0009751!1.91e-11!3;UBERON:0000946!1.91e-11!3;UBERON:0002523!1.91e-11!3;UBERON:0005983!1.91e-11!3;UBERON:0002165!1.91e-11!3;UBERON:0002062!1.91e-11!3;UBERON:0007280!1.91e-11!3;UBERON:0002133!2.40e-08!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;7.62e-26;1!UBERON:0001785;7.62e-26;1!UBERON:0002464;7.62e-26;1!UBERON:0004904;7.62e-26;1!UBERON:0001021;7.62e-26;1!UBERON:0003714;1.21e-13;2!UBERON:0005162;1.21e-13;2!UBERON:0000122;1.21e-13;2 | |ontology_enrichment_uberon_v019=UBERON:0000941;7.62e-26;1!UBERON:0001785;7.62e-26;1!UBERON:0002464;7.62e-26;1!UBERON:0004904;7.62e-26;1!UBERON:0001021;7.62e-26;1!UBERON:0003714;1.21e-13;2!UBERON:0005162;1.21e-13;2!UBERON:0000122;1.21e-13;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,5.93e-26,1;UBERON:0001785,5.93e-26,1;UBERON:0002464,5.93e-26,1;UBERON:0004904,5.93e-26,1;UBERON:0001021,5.93e-26,1;UBERON:0003902,5.93e-26,1;UBERON:0005425,5.93e-26,1;UBERON:0000966,1.71e-17,6;UBERON:0005388,1.71e-17,6;UBERON:0001802,1.71e-17,6;UBERON:0003714,1.07e-13,2;UBERON:0005162,1.07e-13,2;UBERON:0000122,1.07e-13,2;UBERON:0001781,1.69e-07,4;UBERON:0001016,5.89e-07,89 | |||
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| ||
|short_description=p@chr12:65902388..65902392,- | |short_description=p@chr12:65902388..65902392,- | ||
}} | }} |
Latest revision as of 11:25, 24 July 2015
Short description: | p@chr12:65902388..65902392, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:65902388..65902392, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.97e-28 | 8 |
neuron | 1.57e-17 | 6 |
neuroblast | 1.57e-17 | 6 |
electrically signaling cell | 1.57e-17 | 6 |
neural cell | 3.96e-15 | 25 |
neurectodermal cell | 6.36e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 5.93e-26 | 1 |
cranial nerve | 5.93e-26 | 1 |
nerve trunk | 5.93e-26 | 1 |
nerve connecting eye with brain | 5.93e-26 | 1 |
nerve | 5.93e-26 | 1 |
retinal neural layer | 5.93e-26 | 1 |
presumptive neural retina | 5.93e-26 | 1 |
retina | 1.71e-17 | 6 |
photoreceptor array | 1.71e-17 | 6 |
posterior segment of eyeball | 1.71e-17 | 6 |
neural tissue | 1.07e-13 | 2 |
multi cell component structure | 1.07e-13 | 2 |
neuron projection bundle | 1.07e-13 | 2 |
layer of retina | 1.69e-07 | 4 |
nervous system | 5.89e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 1.10e-09 | 3 |