FFCP PHASE1:Hg19::chr12:88813089..88813098,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:88813089..88813098,- | |||
|coexpression_cluster_id=C2247 | |||
|description=CAGE_peak_at_chr12:88813089..88813098,- | |description=CAGE_peak_at_chr12:88813089..88813098,- | ||
|id=chr12:88813089..88813098,- | |id=chr12:88813089..88813098,- | ||
|ontology_enrichment_celltype=CL:0000055!1.56e-31!180;CL:0000057!6.31e-31!75;CL:0002620!9.80e-26!23;CL:0000048!1.46e-12!430;CL:0000723!5.92e-12!436;CL:0000034!3.57e-11!444;CL:0000187!8.57e-10!54;CL:0000680!1.12e-09!57;CL:0000056!1.12e-09!57;CL:0000355!1.12e-09!57;CL:0000188!3.62e-09!9;CL:0000393!9.30e-09!60;CL:0000211!9.30e-09!60;CL:0000183!2.54e-08!59;CL:0002551!4.78e-08!6 | |ontology_enrichment_celltype=CL:0000055!1.56e-31!180;CL:0000057!6.31e-31!75;CL:0002620!9.80e-26!23;CL:0000048!1.46e-12!430;CL:0000723!5.92e-12!436;CL:0000034!3.57e-11!444;CL:0000187!8.57e-10!54;CL:0000680!1.12e-09!57;CL:0000056!1.12e-09!57;CL:0000355!1.12e-09!57;CL:0000188!3.62e-09!9;CL:0000393!9.30e-09!60;CL:0000211!9.30e-09!60;CL:0000183!2.54e-08!59;CL:0002551!4.78e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.33e-35;23!CL:0000188;1.19e-13;9!CL:0000594;5.14e-12;3!CL:0002551;3.00e-09;6!CL:0000057;4.31e-09;73!CL:0002561;6.29e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.40e-35,23;CL:0000057,1.69e-18,76;CL:0000188,9.18e-14,9;CL:0000594,4.40e-12,3;CL:0002551,2.86e-09,6;CL:0002561,6.21e-08,2;CL:0002559,8.66e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!8.51e-08!5;DOID:450!8.51e-08!5;DOID:66!8.51e-08!5;DOID:423!8.51e-08!5;DOID:0080000!8.51e-08!5;DOID:11722!8.51e-08!5 | |ontology_enrichment_disease=DOID:17!8.51e-08!5;DOID:450!8.51e-08!5;DOID:66!8.51e-08!5;DOID:423!8.51e-08!5;DOID:0080000!8.51e-08!5;DOID:11722!8.51e-08!5 | ||
|ontology_enrichment_disease_v019=DOID:17;1.16e-11;5!DOID:450;1.16e-11;5!DOID:66;1.16e-11;5!DOID:423;1.16e-11;5!DOID:0080000;1.16e-11;5!DOID:11722;1.16e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.72e-12,5;DOID:450,7.72e-12,5;DOID:66,7.72e-12,5;DOID:423,7.72e-12,5;DOID:0080000,7.72e-12,5;DOID:11722,7.72e-12,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.37e-18!45;UBERON:0002416!1.37e-18!45;UBERON:0002097!2.53e-17!40;UBERON:0000914!1.15e-14!83;UBERON:0002329!1.15e-14!83;UBERON:0003077!1.15e-14!83;UBERON:0003059!1.15e-14!83;UBERON:0007282!1.15e-14!83;UBERON:0009618!1.15e-14!83;UBERON:0007285!1.15e-14!83;UBERON:0003102!5.04e-14!95;UBERON:0004290!1.45e-12!70;UBERON:0000486!4.25e-10!82;UBERON:0002385!1.01e-08!63;UBERON:0001015!1.01e-08!63;UBERON:0000383!1.01e-08!63;UBERON:0001134!1.57e-08!61;UBERON:0002036!1.57e-08!61;UBERON:0003082!1.57e-08!61;UBERON:0002067!7.53e-07!9;UBERON:0004016!7.53e-07!9;UBERON:0010083!7.53e-07!9 | |ontology_enrichment_uberon=UBERON:0002199!1.37e-18!45;UBERON:0002416!1.37e-18!45;UBERON:0002097!2.53e-17!40;UBERON:0000914!1.15e-14!83;UBERON:0002329!1.15e-14!83;UBERON:0003077!1.15e-14!83;UBERON:0003059!1.15e-14!83;UBERON:0007282!1.15e-14!83;UBERON:0009618!1.15e-14!83;UBERON:0007285!1.15e-14!83;UBERON:0003102!5.04e-14!95;UBERON:0004290!1.45e-12!70;UBERON:0000486!4.25e-10!82;UBERON:0002385!1.01e-08!63;UBERON:0001015!1.01e-08!63;UBERON:0000383!1.01e-08!63;UBERON:0001134!1.57e-08!61;UBERON:0002036!1.57e-08!61;UBERON:0003082!1.57e-08!61;UBERON:0002067!7.53e-07!9;UBERON:0004016!7.53e-07!9;UBERON:0010083!7.53e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;4.22e-23;41!UBERON:0002199;1.98e-18;46!UBERON:0002416;1.98e-18;46!UBERON:0003102;9.11e-14;50!UBERON:0002067;3.39e-09;9!UBERON:0005933;6.29e-08;2!UBERON:0005942;6.29e-08;2!UBERON:0005932;6.29e-08;2!UBERON:0001134;2.26e-07;16!UBERON:0002036;2.26e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.22e-29,41;UBERON:0002199,2.30e-28,46;UBERON:0002416,2.30e-28,46;UBERON:0003102,1.17e-15,99;UBERON:0002067,2.70e-09,9;UBERON:0004016,2.70e-09,9;UBERON:0010083,2.70e-09,9;UBERON:0002329,8.65e-09,71;UBERON:0003059,8.65e-09,71;UBERON:0007282,8.65e-09,71;UBERON:0004290,8.65e-09,71;UBERON:0009618,8.65e-09,71;UBERON:0003077,1.29e-08,72;UBERON:0007285,1.29e-08,72;UBERON:0007524,1.89e-08,73;UBERON:0000486,4.81e-08,83;UBERON:0005933,6.21e-08,2;UBERON:0005942,6.21e-08,2;UBERON:0005932,6.21e-08,2;UBERON:0007503,1.11e-07,78;UBERON:0002073,8.66e-07,5;UBERON:0005086,8.66e-07,5 | |||
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|short_description=p@chr12:88813089..88813098,- | |short_description=p@chr12:88813089..88813098,- | ||
}} | }} |
Latest revision as of 13:12, 24 July 2015
Short description: | p@chr12:88813089..88813098, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:88813089..88813098, - |
Coexpression cluster: | C2247_liposarcoma_Fibroblast_Smooth_Skeletal_Mesenchymal_Pancreatic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.40e-35 | 23 |
fibroblast | 1.69e-18 | 76 |
cell of skeletal muscle | 9.18e-14 | 9 |
skeletal muscle satellite cell | 4.40e-12 | 3 |
fibroblast of dermis | 2.86e-09 | 6 |
outer root sheath cell | 6.21e-08 | 2 |
hair follicle cell | 8.66e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.22e-29 | 41 |
integument | 2.30e-28 | 46 |
integumental system | 2.30e-28 | 46 |
surface structure | 1.17e-15 | 99 |
dermis | 2.70e-09 | 9 |
dermatome | 2.70e-09 | 9 |
future dermis | 2.70e-09 | 9 |
somite | 8.65e-09 | 71 |
presomitic mesoderm | 8.65e-09 | 71 |
presumptive segmental plate | 8.65e-09 | 71 |
dermomyotome | 8.65e-09 | 71 |
trunk paraxial mesoderm | 8.65e-09 | 71 |
paraxial mesoderm | 1.29e-08 | 72 |
presumptive paraxial mesoderm | 1.29e-08 | 72 |
dense mesenchyme tissue | 1.89e-08 | 73 |
multilaminar epithelium | 4.81e-08 | 83 |
hair root sheath | 6.21e-08 | 2 |
hair outer root sheath | 6.21e-08 | 2 |
bulb of hair follicle | 6.21e-08 | 2 |
epithelial vesicle | 1.11e-07 | 78 |
hair follicle | 8.66e-07 | 5 |
hair follicle placode | 8.66e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.72e-12 | 5 |
myotonic disease | 7.72e-12 | 5 |
muscle tissue disease | 7.72e-12 | 5 |
myopathy | 7.72e-12 | 5 |
muscular disease | 7.72e-12 | 5 |
myotonic dystrophy | 7.72e-12 | 5 |