FFCP PHASE1:Hg19::chr12:89554794..89554813,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:89554794..89554813,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr12:89554794..89554813,+ | |description=CAGE_peak_at_chr12:89554794..89554813,+ | ||
|id=chr12:89554794..89554813,+ | |id=chr12:89554794..89554813,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.46e-55!42;CL:0000860!1.63e-53!45;CL:0000766!7.33e-45!76;CL:0000557!3.10e-42!71;CL:0000839!6.09e-41!70;CL:0002009!3.01e-38!65;CL:0002194!9.19e-38!63;CL:0000576!9.19e-38!63;CL:0000040!9.19e-38!63;CL:0000559!9.19e-38!63;CL:0000738!1.58e-27!140;CL:0000763!6.63e-27!112;CL:0000049!6.63e-27!112;CL:0002031!1.39e-22!124;CL:0002087!1.39e-21!119;CL:0000037!2.89e-19!172;CL:0000566!2.89e-19!172;CL:0000034!2.37e-17!444;CL:0000988!2.62e-17!182;CL:0002032!5.85e-17!165;CL:0000837!5.85e-17!165;CL:0000723!1.11e-16!436;CL:0000048!1.17e-16!430;CL:0000134!1.66e-15!358;CL:0002320!8.96e-15!365;CL:0000219!3.18e-12!390;CL:0000144!1.79e-10!625;CL:0002371!1.05e-09!591;CL:0000012!1.06e-07!682;CL:0000569!2.18e-07!4;CL:0000011!2.18e-07!4;CL:0000063!7.48e-07!578;CL:0000548!8.46e-07!679;CL:0000004!8.46e-07!679;CL:0000255!8.46e-07!679 | |ontology_enrichment_celltype=CL:0002057!1.46e-55!42;CL:0000860!1.63e-53!45;CL:0000766!7.33e-45!76;CL:0000557!3.10e-42!71;CL:0000839!6.09e-41!70;CL:0002009!3.01e-38!65;CL:0002194!9.19e-38!63;CL:0000576!9.19e-38!63;CL:0000040!9.19e-38!63;CL:0000559!9.19e-38!63;CL:0000738!1.58e-27!140;CL:0000763!6.63e-27!112;CL:0000049!6.63e-27!112;CL:0002031!1.39e-22!124;CL:0002087!1.39e-21!119;CL:0000037!2.89e-19!172;CL:0000566!2.89e-19!172;CL:0000034!2.37e-17!444;CL:0000988!2.62e-17!182;CL:0002032!5.85e-17!165;CL:0000837!5.85e-17!165;CL:0000723!1.11e-16!436;CL:0000048!1.17e-16!430;CL:0000134!1.66e-15!358;CL:0002320!8.96e-15!365;CL:0000219!3.18e-12!390;CL:0000144!1.79e-10!625;CL:0002371!1.05e-09!591;CL:0000012!1.06e-07!682;CL:0000569!2.18e-07!4;CL:0000011!2.18e-07!4;CL:0000063!7.48e-07!578;CL:0000548!8.46e-07!679;CL:0000004!8.46e-07!679;CL:0000255!8.46e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.48e-86;33!CL:0002057;7.48e-86;33!CL:0000473;5.43e-59;39!CL:0000234;5.43e-59;39!CL:0000576;2.06e-47;48!CL:0000766;4.54e-35;69!CL:0000763;6.04e-16;100!CL:0002087;8.87e-13;104!CL:0000097;5.71e-11;5!CL:0000767;9.03e-11;3!CL:0000738;1.04e-09;136!CL:0000569;4.98e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.87e-88,42;CL:0002057,1.87e-88,42;CL:0000473,2.60e-76,48;CL:0000234,2.60e-76,48;CL:0000766,1.54e-74,72;CL:0000839,4.69e-70,66;CL:0000557,6.95e-69,67;CL:0002194,4.60e-63,59;CL:0000576,4.60e-63,59;CL:0000040,4.60e-63,59;CL:0000559,4.60e-63,59;CL:0002009,9.63e-61,61;CL:0000763,1.33e-46,108;CL:0000049,1.33e-46,108;CL:0000738,3.75e-39,136;CL:0002031,1.60e-34,120;CL:0002087,2.43e-32,115;CL:0000037,8.75e-30,168;CL:0002032,4.45e-28,161;CL:0000837,4.45e-28,161;CL:0000988,9.31e-28,177;CL:0000134,3.59e-16,354;CL:0002320,1.23e-15,361;CL:0000034,7.23e-14,441;CL:0000219,9.34e-14,386;CL:0000048,5.08e-13,427;CL:0000723,1.12e-12,433;CL:0000097,5.20e-11,5;CL:0002028,5.20e-11,5;CL:0000767,8.57e-11,3;CL:0000569,5.79e-08,4;CL:0000011,5.79e-08,4 | |||
|ontology_enrichment_development_v019=CL:0002057;3.23e-65;42!CL:0000049;2.81e-12;108!CL:0000011;4.98e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.68e-41!80;UBERON:0001474!1.54e-37!86;UBERON:0002390!1.50e-35!102;UBERON:0003061!1.50e-35!102;UBERON:0004765!6.16e-34!101;UBERON:0001434!6.16e-34!101;UBERON:0002193!2.55e-32!112;UBERON:0002405!5.53e-28!115;UBERON:0002204!1.55e-25!167;UBERON:0003081!2.64e-21!216;UBERON:0002384!8.80e-14!375;UBERON:0000926!1.79e-07!448;UBERON:0004120!1.79e-07!448;UBERON:0006603!1.79e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.03e-59,76;UBERON:0001474,1.05e-54,82;UBERON:0002390,1.14e-49,98;UBERON:0003061,1.14e-49,98;UBERON:0004765,4.72e-49,90;UBERON:0002405,3.51e-47,93;UBERON:0002193,3.32e-44,108;UBERON:0001434,3.00e-43,100;UBERON:0003081,5.36e-27,203;UBERON:0002204,4.47e-25,167;UBERON:0002384,6.57e-15,371;UBERON:0000926,1.19e-13,315;UBERON:0004120,1.19e-13,315;UBERON:0006603,1.19e-13,315 | |||
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| ||
|short_description=p@chr12:89554794..89554813,+ | |short_description=p@chr12:89554794..89554813,+ | ||
}} | }} |
Latest revision as of 13:14, 24 July 2015
Short description: | p@chr12:89554794..89554813, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:89554794..89554813, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.03e-59 | 76 |
bone element | 1.05e-54 | 82 |
hematopoietic system | 1.14e-49 | 98 |
blood island | 1.14e-49 | 98 |
skeletal element | 4.72e-49 | 90 |
immune system | 3.51e-47 | 93 |
hemolymphoid system | 3.32e-44 | 108 |
skeletal system | 3.00e-43 | 100 |
lateral plate mesoderm | 5.36e-27 | 203 |
musculoskeletal system | 4.47e-25 | 167 |
connective tissue | 6.57e-15 | 371 |
mesoderm | 1.19e-13 | 315 |
mesoderm-derived structure | 1.19e-13 | 315 |
presumptive mesoderm | 1.19e-13 | 315 |