FFCP PHASE1:Hg19::chr13:61626552..61626556,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:61626552..61626556,- | |||
|description=CAGE_peak_at_chr13:61626552..61626556,- | |description=CAGE_peak_at_chr13:61626552..61626556,- | ||
|id=chr13:61626552..61626556,- | |id=chr13:61626552..61626556,- | ||
|ontology_enrichment_celltype=CL:0000946!5.43e-08!1;CL:0000786!5.43e-08!1;CL:0000980!5.43e-08!1 | |ontology_enrichment_celltype=CL:0000946!5.43e-08!1;CL:0000786!5.43e-08!1;CL:0000980!5.43e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0002593;7.05e-34;2!CL:0002595;1.83e-14;5!CL:0000540;2.19e-12;6!CL:0000404;2.19e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,7.05e-34,2;CL:0002595,1.83e-14,5;CL:0000540,2.19e-12,6;CL:0000031,2.19e-12,6;CL:0000404,2.19e-12,6;CL:0000047,1.24e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.39e-66;1!CL:0000031;2.19e-12;6 | |||
|ontology_enrichment_disease=DOID:6193!3.57e-08!1 | |ontology_enrichment_disease=DOID:6193!3.57e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002771!6.22e-10!3;UBERON:0005418!1.31e-08!1;UBERON:0001389!1.31e-08!1;UBERON:0000026!1.31e-08!1;UBERON:0008784!1.31e-08!1;UBERON:0006058!1.31e-08!1;UBERON:0003663!1.31e-08!1;UBERON:0001383!1.31e-08!1;UBERON:0004256!1.31e-08!1;UBERON:0002529!1.31e-08!1;UBERON:0004708!1.31e-08!1;UBERON:0002101!1.31e-08!1;UBERON:0004709!1.31e-08!1;UBERON:0003661!1.31e-08!1;UBERON:0002471!1.31e-08!1;UBERON:0004357!1.31e-08!1;UBERON:0009872!1.31e-08!1;UBERON:0004347!1.31e-08!1;UBERON:0005420!1.31e-08!1;UBERON:0005732!1.31e-08!1;UBERON:0006057!1.31e-08!1;UBERON:0000978!1.31e-08!1;UBERON:0002103!1.31e-08!1;UBERON:0001665!1.31e-08!1;UBERON:0003823!1.31e-08!1;UBERON:0000154!1.31e-08!1;UBERON:0005733!1.31e-08!1;UBERON:0005730!1.31e-08!1;UBERON:0002146!3.10e-08!1;UBERON:0005623!3.10e-08!1 | |ontology_enrichment_uberon=UBERON:0002771!6.22e-10!3;UBERON:0005418!1.31e-08!1;UBERON:0001389!1.31e-08!1;UBERON:0000026!1.31e-08!1;UBERON:0008784!1.31e-08!1;UBERON:0006058!1.31e-08!1;UBERON:0003663!1.31e-08!1;UBERON:0001383!1.31e-08!1;UBERON:0004256!1.31e-08!1;UBERON:0002529!1.31e-08!1;UBERON:0004708!1.31e-08!1;UBERON:0002101!1.31e-08!1;UBERON:0004709!1.31e-08!1;UBERON:0003661!1.31e-08!1;UBERON:0002471!1.31e-08!1;UBERON:0004357!1.31e-08!1;UBERON:0009872!1.31e-08!1;UBERON:0004347!1.31e-08!1;UBERON:0005420!1.31e-08!1;UBERON:0005732!1.31e-08!1;UBERON:0006057!1.31e-08!1;UBERON:0000978!1.31e-08!1;UBERON:0002103!1.31e-08!1;UBERON:0001665!1.31e-08!1;UBERON:0003823!1.31e-08!1;UBERON:0000154!1.31e-08!1;UBERON:0005733!1.31e-08!1;UBERON:0005730!1.31e-08!1;UBERON:0002146!3.10e-08!1;UBERON:0005623!3.10e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002456;7.05e-34;2!UBERON:0003834;1.83e-14;5!UBERON:0001533;1.83e-14;5!UBERON:0003513;9.89e-11;7!UBERON:0002331;6.13e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,7.05e-34,2;UBERON:0003834,1.83e-14,5;UBERON:0001533,1.83e-14,5;UBERON:0003513,9.89e-11,7;UBERON:0002331,6.13e-08,10;UBERON:0000358,6.13e-08,10;UBERON:0000307,6.13e-08,10;UBERON:0000091,6.13e-08,10;UBERON:0000087,6.13e-08,10;UBERON:0007010,6.13e-08,10;UBERON:0007806,6.13e-08,10;UBERON:0008780,6.13e-08,10;UBERON:0005728,6.13e-08,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05430982083536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348724276104376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05430982083536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348724276104376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p@chr13:61626552..61626556,- | |short_description=p@chr13:61626552..61626556,- | ||
}} | }} |
Latest revision as of 16:54, 24 July 2015
Short description: | p@chr13:61626552..61626556, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:61626552..61626556, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 7.05e-34 | 2 |
smooth muscle cell of the subclavian artery | 1.83e-14 | 5 |
neuron | 2.19e-12 | 6 |
neuroblast | 2.19e-12 | 6 |
electrically signaling cell | 2.19e-12 | 6 |
neuronal stem cell | 1.24e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 7.05e-34 | 2 |
thoracic segment blood vessel | 1.83e-14 | 5 |
subclavian artery | 1.83e-14 | 5 |
trunk blood vessel | 9.89e-11 | 7 |
umbilical cord | 6.13e-08 | 10 |
blastocyst | 6.13e-08 | 10 |
blastula | 6.13e-08 | 10 |
bilaminar disc | 6.13e-08 | 10 |
inner cell mass | 6.13e-08 | 10 |
cleaving embryo | 6.13e-08 | 10 |
connecting stalk | 6.13e-08 | 10 |
inner cell mass derived epiblast | 6.13e-08 | 10 |
extraembryonic mesoderm | 6.13e-08 | 10 |