FFCP PHASE1:Hg19::chr13:66878571..66878580,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:66878571..66878580,- | |||
|coexpression_cluster_id=C1027 | |||
|description=CAGE_peak_at_chr13:66878571..66878580,- | |||
|id=chr13:66878571..66878580,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.34e-66;1!UBERON:0003056;3.66e-23;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.49e-66!57;UBERON:0005068!9.49e-66!57;UBERON:0006241!9.49e-66!57;UBERON:0007135!9.49e-66!57;UBERON:0002616!1.08e-58!59;UBERON:0002020!1.35e-56!34;UBERON:0003528!1.35e-56!34;UBERON:0001017!9.74e-55!82;UBERON:0000955!7.75e-53!69;UBERON:0006238!7.75e-53!69;UBERON:0005743!5.73e-52!86;UBERON:0002780!9.17e-51!41;UBERON:0001890!9.17e-51!41;UBERON:0006240!9.17e-51!41;UBERON:0001893!2.58e-50!34;UBERON:0000073!4.44e-50!94;UBERON:0001016!4.44e-50!94;UBERON:0003080!1.78e-49!42;UBERON:0001869!7.65e-48!32;UBERON:0002791!1.39e-46!33;UBERON:0003075!2.27e-45!86;UBERON:0007284!2.27e-45!86;UBERON:0002346!4.11e-43!90;UBERON:0002619!4.42e-42!22;UBERON:0000956!6.96e-37!25;UBERON:0000203!6.96e-37!25;UBERON:0000033!1.31e-34!123;UBERON:0001950!1.70e-33!20;UBERON:0007023!4.49e-33!115;UBERON:0003056!6.87e-33!61;UBERON:0000153!9.74e-33!129;UBERON:0007811!9.74e-33!129;UBERON:0004121!2.24e-27!169;UBERON:0000924!1.32e-26!173;UBERON:0006601!1.32e-26!173;UBERON:0002298!7.75e-24!8;UBERON:0001871!3.35e-23!7;UBERON:0002308!1.75e-21!9;UBERON:0000125!1.75e-21!9;UBERON:0000200!2.92e-21!6;UBERON:0006331!1.85e-17!3;UBERON:0003076!1.15e-16!15;UBERON:0003057!1.15e-16!15;UBERON:0002771!2.10e-16!3;UBERON:0001896!2.74e-16!3;UBERON:0005290!2.74e-16!3;UBERON:0010096!2.74e-16!3;UBERON:0000025!2.05e-15!194;UBERON:0002420!6.20e-15!9;UBERON:0007245!6.20e-15!9;UBERON:0010009!6.20e-15!9;UBERON:0010011!6.20e-15!9;UBERON:0000454!6.20e-15!9;UBERON:0004732!1.39e-14!13;UBERON:0009663!1.38e-12!7;UBERON:0002148!2.29e-12!2;UBERON:0009662!2.29e-12!2;UBERON:0004111!2.29e-12!241;UBERON:0001954!2.70e-12!2;UBERON:0003022!2.70e-12!2;UBERON:0002421!2.70e-12!2;UBERON:0002600!2.70e-12!2;UBERON:0001875!3.56e-12!2;UBERON:0006514!3.56e-12!2;UBERON:0000477!1.80e-11!286;UBERON:0004733!4.48e-11!12;UBERON:0002028!4.48e-11!12;UBERON:0007277!4.48e-11!12;UBERON:0000064!9.27e-11!219;UBERON:0000349!1.18e-10!5;UBERON:0000475!4.16e-10!365;UBERON:0000483!2.97e-09!309;UBERON:0000119!4.17e-09!312;UBERON:0000988!1.60e-08!3;UBERON:0002240!5.25e-08!3;UBERON:0000941!4.33e-07!1;UBERON:0004904!4.33e-07!1;UBERON:0002464!4.33e-07!1;UBERON:0001021!4.33e-07!1;UBERON:0001785!4.33e-07!1;UBERON:0003112!8.03e-07!1;UBERON:0000032!8.03e-07!1;UBERON:0005253!8.03e-07!1;UBERON:0003128!8.03e-07!1;UBERON:0002241!8.03e-07!1;UBERON:0001703!8.03e-07!1;UBERON:0004761!8.03e-07!1;UBERON:0009617!8.03e-07!1;UBERON:0002038!8.49e-07!1;UBERON:0009661!8.49e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.34e-66;1!UBERON:0001785;3.34e-66;1!UBERON:0002464;3.34e-66;1!UBERON:0004904;3.34e-66;1!UBERON:0001021;3.34e-66;1!UBERON:0002148;3.61e-34;2!UBERON:0006331;3.61e-34;2!UBERON:0009662;3.61e-34;2!UBERON:0002360;5.96e-34;2!UBERON:0003714;5.96e-34;2!UBERON:0005162;5.96e-34;2!UBERON:0000122;5.96e-34;2!UBERON:0000094;5.96e-34;2!UBERON:0010743;5.96e-34;2!UBERON:0000988;2.62e-23;3!UBERON:0004732;2.28e-21;13!UBERON:0002298;2.19e-12;6!UBERON:0002680;1.04e-08;9!UBERON:0000125;1.04e-08;9!UBERON:0002308;1.04e-08;9!UBERON:0001895;1.04e-08;9!UBERON:0000010;1.16e-08;8!UBERON:0004733;7.48e-07;12!UBERON:0002028;7.48e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.39e-66,1;UBERON:0001785,2.39e-66,1;UBERON:0002464,2.39e-66,1;UBERON:0004904,2.39e-66,1;UBERON:0001021,2.39e-66,1;UBERON:0003902,2.39e-66,1;UBERON:0005425,2.39e-66,1;UBERON:0002148,3.61e-34,2;UBERON:0006331,3.61e-34,2;UBERON:0009662,3.61e-34,2;UBERON:0003714,5.04e-34,2;UBERON:0005162,5.04e-34,2;UBERON:0000122,5.04e-34,2;UBERON:0002360,7.05e-34,2;UBERON:0000094,7.05e-34,2;UBERON:0010743,7.05e-34,2;UBERON:0000988,2.62e-23,3;UBERON:0004732,2.16e-21,13;UBERON:0001781,8.69e-18,4;UBERON:0002298,2.19e-12,6;UBERON:0000966,2.45e-12,6;UBERON:0005388,2.45e-12,6;UBERON:0001802,2.45e-12,6;UBERON:0002680,1.04e-08,9;UBERON:0000125,1.04e-08,9;UBERON:0002308,1.04e-08,9;UBERON:0001895,1.04e-08,9;UBERON:0010092,1.04e-08,9;UBERON:0000010,1.12e-08,8;UBERON:0001016,1.68e-07,89;UBERON:0004733,7.48e-07,12;UBERON:0002028,7.48e-07,12;UBERON:0007277,7.48e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.684526894459965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.817220436669454,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19781025814636,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.3755727921195,0.573409195690071,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957803154342908,0,0.252071696221718,0,0.484426936895553,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:66878571..66878580,- | |||
}} |
Latest revision as of 16:55, 24 July 2015
Short description: | p@chr13:66878571..66878580, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:66878571..66878580, - |
Coexpression cluster: | C1027_hippocampus_occipital_optic_globus_thalamus_cerebral_locus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.39e-66 | 1 |
cranial nerve | 2.39e-66 | 1 |
nerve trunk | 2.39e-66 | 1 |
nerve connecting eye with brain | 2.39e-66 | 1 |
nerve | 2.39e-66 | 1 |
retinal neural layer | 2.39e-66 | 1 |
presumptive neural retina | 2.39e-66 | 1 |
locus ceruleus | 3.61e-34 | 2 |
brainstem nucleus | 3.61e-34 | 2 |
hindbrain nucleus | 3.61e-34 | 2 |
neural tissue | 5.04e-34 | 2 |
multi cell component structure | 5.04e-34 | 2 |
neuron projection bundle | 5.04e-34 | 2 |
meninx | 7.05e-34 | 2 |
membrane organ | 7.05e-34 | 2 |
meningeal cluster | 7.05e-34 | 2 |
pons | 2.62e-23 | 3 |
segmental subdivision of nervous system | 2.16e-21 | 13 |
layer of retina | 8.69e-18 | 4 |
brainstem | 2.19e-12 | 6 |
retina | 2.45e-12 | 6 |
photoreceptor array | 2.45e-12 | 6 |
posterior segment of eyeball | 2.45e-12 | 6 |
regional part of metencephalon | 1.04e-08 | 9 |
neural nucleus | 1.04e-08 | 9 |
nucleus of brain | 1.04e-08 | 9 |
metencephalon | 1.04e-08 | 9 |
future metencephalon | 1.04e-08 | 9 |
peripheral nervous system | 1.12e-08 | 8 |
nervous system | 1.68e-07 | 89 |
segmental subdivision of hindbrain | 7.48e-07 | 12 |
hindbrain | 7.48e-07 | 12 |
presumptive hindbrain | 7.48e-07 | 12 |