FFCP PHASE1:Hg19::chr14:88200641..88200643,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000556168_5end | |||
|cluster_id=chr14:88200641..88200643,- | |||
|coexpression_cluster_id=C330 | |||
|description=CAGE_peak_1_at_ENST00000556168_5end | |||
|id=chr14:88200641..88200643,- | |||
|ontology_enrichment_celltype=CL:0002573!1.07e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000322;6.76e-18;3!CL:0002202;7.48e-07;9!CL:0002632;7.48e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,6.76e-18,3;CL:0002202,7.48e-07,9;CL:0002632,7.48e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.04e-20;10!UBERON:0007687;1.04e-20;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;4.32e-26;2!DOID:3908;2.66e-11;5!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,4.32e-26,2;DOID:3908,2.66e-11,5;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:3905,7.48e-07,9 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;4.32e-26;2!UBERON:0002173;4.32e-26;2!UBERON:0002186;4.32e-26;2!UBERON:0004821;6.76e-18;3!UBERON:0007499;6.76e-18;3!UBERON:0003215;6.76e-18;3!UBERON:0010368;6.76e-18;3!UBERON:0009911;6.76e-18;3!UBERON:0002299;6.76e-18;3!UBERON:0006524;6.76e-18;3!UBERON:0008874;6.76e-18;3!UBERON:0002169;6.76e-18;3!UBERON:0004894;6.76e-18;3!UBERON:0009856;8.82e-14;4!UBERON:0002113;2.78e-09;24!UBERON:0011143;2.78e-09;24!UBERON:0000489;7.40e-08;29!UBERON:0006554;1.25e-07;30!UBERON:0001008;1.25e-07;30!UBERON:0000473;1.59e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,4.32e-26,2;UBERON:0002173,4.32e-26,2;UBERON:0002186,4.32e-26,2;UBERON:0004821,6.76e-18,3;UBERON:0003215,6.76e-18,3;UBERON:0010368,6.76e-18,3;UBERON:0009911,6.76e-18,3;UBERON:0002299,6.76e-18,3;UBERON:0006524,6.76e-18,3;UBERON:0008874,6.76e-18,3;UBERON:0002169,6.76e-18,3;UBERON:0004894,6.76e-18,3;UBERON:0002113,1.20e-08,26;UBERON:0003918,1.20e-08,26;UBERON:0011143,1.20e-08,26;UBERON:0005095,1.20e-08,26;UBERON:0007687,1.20e-08,26;UBERON:0000473,1.59e-07,8;UBERON:0000489,2.05e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0.66866030566487,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.123084805461069,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,4.57656570526979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,1.65355761355942,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0,0.264768380074501,0,0,0,0,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5256112259285,0,0,0,0,0.903017728242729,0,0,0,0,0,0,0,0,0.427149650270779,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354996002191696,0.426067023795788,0,0,0.93061915699296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.530450887527676,2.94760543171796,0,0,0,0,0,0,0.448527450322454,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p1@ENST00000556168 | |||
}} |
Latest revision as of 23:20, 24 July 2015
Short description: | p1@ENST00000556168 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000556168_5end |
Coexpression cluster: | C330_bronchioalveolar_oral_signet_embryonic_lymphangiectasia_testis_adult |
Association with transcript: | 0bp_to_ENST00000556168_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 6.76e-18 | 3 |
epithelial cell of tracheobronchial tree | 7.48e-07 | 9 |
epithelial cell of lower respiratory tract | 7.48e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 4.32e-26 | 2 |
alveolar duct | 4.32e-26 | 2 |
bronchiole | 4.32e-26 | 2 |
pulmonary alveolus epithelium | 6.76e-18 | 3 |
alveolus | 6.76e-18 | 3 |
pulmonary lobule | 6.76e-18 | 3 |
lobule | 6.76e-18 | 3 |
alveolus of lung | 6.76e-18 | 3 |
alveolar system | 6.76e-18 | 3 |
pulmonary acinus | 6.76e-18 | 3 |
alveolar sac | 6.76e-18 | 3 |
alveolar wall | 6.76e-18 | 3 |
kidney | 1.20e-08 | 26 |
kidney mesenchyme | 1.20e-08 | 26 |
upper urinary tract | 1.20e-08 | 26 |
kidney rudiment | 1.20e-08 | 26 |
kidney field | 1.20e-08 | 26 |
testis | 1.59e-07 | 8 |
cavitated compound organ | 2.05e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 4.32e-26 | 2 |
non-small cell lung carcinoma | 2.66e-11 | 5 |
bronchus cancer | 1.89e-08 | 7 |
bronchogenic carcinoma | 1.89e-08 | 7 |
lung carcinoma | 7.48e-07 | 9 |