FFCP PHASE1:Hg19::chr15:39881997..39882024,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:39881997..39882024,+
|short_description=p@chr15:39881997..39882024,+
|description=CAGE_peak_at_chr15:39881997..39882024,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:39881997..39882024,+ | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_at_chr15:39881997..39882024,+ | |||
|id=chr15:39881997..39882024,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.02e-19!180;CL:0002371!7.31e-18!591;CL:0000057!2.20e-16!75;CL:0000144!2.25e-14!625;CL:0000548!6.54e-12!679;CL:0000004!6.54e-12!679;CL:0000255!6.54e-12!679;CL:0000222!7.40e-12!119;CL:0000012!2.30e-11!682;CL:0000115!3.70e-10!35;CL:0002139!1.65e-09!24;CL:0000220!2.11e-09!246;CL:0002321!5.19e-09!248;CL:0002078!1.40e-08!44;CL:0002334!5.74e-08!12;CL:0000723!5.85e-08!436;CL:0002620!1.58e-07!23;CL:0000048!2.02e-07!430;CL:0000034!2.50e-07!444;CL:0000063!4.53e-07!578;CL:0000680!5.05e-07!57;CL:0000056!5.05e-07!57;CL:0000355!5.05e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.11e-13;24!CL:0000115;4.41e-12;36!CL:0002334;6.45e-12;12!CL:0002620;8.80e-10;23!CL:0000071;2.02e-09;18!CL:0000349;2.82e-09;19!CL:0002078;4.50e-07;45!CL:0000057;8.27e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.28e-19,76;CL:0000115,3.19e-14,36;CL:0002139,9.82e-14,24;CL:0002334,1.12e-11,12;CL:0002078,1.25e-10,45;CL:0002620,9.06e-10,23;CL:0000071,2.33e-09,18;CL:0002546,2.33e-09,18;CL:0000349,2.40e-09,19;CL:0000723,5.99e-09,433;CL:0000048,7.79e-09,427;CL:0000034,3.20e-08,441;CL:0000213,4.17e-08,58;CL:0000215,4.17e-08,58;CL:0000222,1.48e-07,121;CL:0000136,2.62e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002546;2.02e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;7.84e-07;5!DOID:450;7.84e-07;5!DOID:66;7.84e-07;5!DOID:423;7.84e-07;5!DOID:0080000;7.84e-07;5!DOID:11722;7.84e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.05e-07,5;DOID:450,8.05e-07,5;DOID:66,8.05e-07,5;DOID:423,8.05e-07,5;DOID:0080000,8.05e-07,5;DOID:11722,8.05e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0004872!2.24e-18!84;UBERON:0002049!1.07e-16!79;UBERON:0007798!1.07e-16!79;UBERON:0000055!4.02e-16!69;UBERON:0001009!8.08e-15!113;UBERON:0004535!1.43e-14!110;UBERON:0001981!1.90e-14!60;UBERON:0007500!1.90e-14!60;UBERON:0004537!1.90e-14!60;UBERON:0006965!1.90e-14!60;UBERON:0000468!1.01e-11!659;UBERON:0003102!5.98e-11!95;UBERON:0003914!7.70e-11!118;UBERON:0000467!1.07e-10!625;UBERON:0001637!1.26e-10!42;UBERON:0003509!1.26e-10!42;UBERON:0004572!1.26e-10!42;UBERON:0002199!1.49e-10!45;UBERON:0002416!1.49e-10!45;UBERON:0000480!1.58e-10!626;UBERON:0000490!2.35e-10!138;UBERON:0002097!1.06e-09!40;UBERON:0003081!1.08e-08!216;UBERON:0004573!2.58e-08!33;UBERON:0004571!2.58e-08!33;UBERON:0004923!1.42e-07!57;UBERON:0000926!1.86e-07!448;UBERON:0004120!1.86e-07!448;UBERON:0006603!1.86e-07!448;UBERON:0000914!2.41e-07!83;UBERON:0002329!2.41e-07!83;UBERON:0003077!2.41e-07!83;UBERON:0003059!2.41e-07!83;UBERON:0007282!2.41e-07!83;UBERON:0009618!2.41e-07!83;UBERON:0007285!2.41e-07!83;UBERON:0005631!3.61e-07!14;UBERON:0000158!3.61e-07!14;UBERON:0005256!7.04e-07!143;UBERON:0000486!7.87e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.67e-10;42!UBERON:0003509;4.67e-10;42!UBERON:0004572;4.67e-10;42!UBERON:0002097;1.13e-09;41!UBERON:0007500;1.44e-09;56!UBERON:0001981;1.44e-09;56!UBERON:0004537;1.44e-09;56!UBERON:0004638;2.02e-09;18!UBERON:0001986;2.02e-09;18!UBERON:0004852;2.02e-09;18!UBERON:0002199;4.85e-09;46!UBERON:0002416;4.85e-09;46!UBERON:0000055;5.50e-09;65!UBERON:0003688;1.77e-08;6!UBERON:0002358;1.77e-08;6!UBERON:0003684;1.77e-08;6!UBERON:0001178;1.77e-08;6!UBERON:0004573;2.05e-08;33!UBERON:0004571;2.05e-08;33!UBERON:0000487;2.10e-08;22!UBERON:0005631;9.95e-08;10!UBERON:0000158;9.95e-08;10!UBERON:0000305;2.16e-07;7!UBERON:0006914;7.14e-07;25!UBERON:0003102;9.25e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.14e-16,68;UBERON:0004872,1.98e-14,83;UBERON:0007500,2.94e-14,59;UBERON:0001981,2.94e-14,59;UBERON:0004537,2.94e-14,59;UBERON:0006965,2.94e-14,59;UBERON:0002199,1.15e-13,46;UBERON:0002416,1.15e-13,46;UBERON:0002049,1.64e-13,78;UBERON:0007798,1.64e-13,78;UBERON:0002097,5.11e-12,41;UBERON:0001637,5.87e-12,42;UBERON:0003509,5.87e-12,42;UBERON:0004572,5.87e-12,42;UBERON:0003102,4.73e-10,99;UBERON:0004535,5.00e-10,109;UBERON:0001009,2.12e-09,112;UBERON:0004638,2.33e-09,18;UBERON:0001986,2.33e-09,18;UBERON:0004852,2.33e-09,18;UBERON:0003081,2.96e-09,203;UBERON:0004573,5.42e-09,33;UBERON:0004571,5.42e-09,33;UBERON:0005631,7.25e-09,14;UBERON:0000158,7.25e-09,14;UBERON:0003914,8.01e-09,117;UBERON:0004871,1.19e-08,8;UBERON:0003688,1.86e-08,6;UBERON:0002358,1.86e-08,6;UBERON:0003684,1.86e-08,6;UBERON:0001178,1.86e-08,6;UBERON:0000487,2.37e-08,22;UBERON:0004923,1.45e-07,66;UBERON:0000305,1.84e-07,7;UBERON:0006914,7.88e-07,25 | |||
|phase1_expression=22.3464406502785,22.9087560563352,9.16203626623813,26.0190575718139,12.5149106439641,32.2765253917136,5.06599756336621,1.26343974685366,0,0.491467873003018,2.09340350391728,2.40285509343189,3.9565046734268,0.123766352960047,0,10.7572023432284,0.602694528023977,4.38186054232424,3.90346239032406,0.246242116153576,0.204000691244253,0.313454721478088,0,0.136874425072884,0.627713197974014,0,0,0,0,0.767658796194425,0.619264493264304,0,0.30120591877825,0.369754010166788,0,0,0,0.553995408531877,2.00544447470142,0.217010870715852,0.223915474239924,0.32389366601898,0,0.726991193897824,0,0,4.88100977501938,0,0,4.89077066947656,0.512321413058201,0.47296445977717,6.89491361473237,0,0,4.51781614902251,0.818718450173537,0,8.87643287875617,1.92557416245656,0.639337125799041,1.31940520074686,0.598390972864896,0.426224750532694,9.28669563611469,1.13477044938228,0,3.26623264833766,1.0429658368404,0.434377689410233,7.26479403160043,0.736555271975129,1.58231193720442,0,0,0,0.336985893439485,0.600707571366025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,1.15076305659177,1.80719576192283,3.50936537445123,1.88300474649071,2.3858578411533,3.40644409211845,0.378139268656271,0.443458794925128,0.175669571386252,0.130979075497713,0.728590576585084,0.370784442784429,0,0,0,0,0,0,1.59009925893364,0,3.12426451446835,3.39184765154406,2.51699661725944,3.02629846134074,4.38889429727302,2.84258435086262,1.77883131343355,4.01664735317604,6.0424397566372,1.52054421143703,3.66093086322254,5.51494620518803,6.48113558305408,3.21479021822687,2.02076435363553,1.23872628531654,0,0.949265659568129,3.84723662253855,0,0,0.872188104285069,18.3879622127268,16.8418580513891,8.07696002960635,18.9312169694217,1.77334191099179,1.68203280042692,6.4049397437823,7.4000264525148,0.622422070799533,0.538842688278752,0.980771418680752,0.605429710579726,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0,0.408308342509787,0.122834317311768,0.723280468230358,15.4440371446667,15.083282685992,0,0.718618141816238,0,0.250237039743928,0.831192346452549,4.38977620880838,8.58165828237255,7.21142682751665,1.13432183160021,15.606898304931,11.1049842185655,8.68920794754204,7.50227740211006,6.08009922506789,8.75977836155139,9.1197259602479,4.72573730275545,8.18470843354068,6.56327813034698,6.99579229681475,4.36444353410792,11.3603069605317,3.32481924151213,3.89989362314122,0.773043412653187,3.00020732649918,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,4.69348596989448,12.8648187638577,8.28809528114883,3.25057549622385,1.44375896333917,0.118306800039844,0,0.241011029883482,0.661763836394364,0.435758888184812,0,0,0,0.38474715694639,2.21446636387394,2.80483547606892,0.8231480226628,0,0,0,0,0,0,0.171567810298526,1.97550513735526,1.1240175325762,0.603173834469785,0.648119116109707,0,0,0,0,0.234817388471643,2.88732895522148,6.01881166349594,7.41991193714933,0,0,0,0,0,0,8.06314215354526,2.41017665312057,2.05984602216551,2.03443756959773,0.766765358330422,0.492663237895943,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0.411309970813294,0,0,0,0.43596006883328,0,0.646358578788889,0,1.690605505112,7.97814349754611,6.24044621468197,0,0,0.266422179016099,0.142977993658148,0.542621605391443,3.29296134712308,0,0.710783897485092,0,0,0,0,0,0,0,3.83399768786532,2.29723871668228,0,1.15825045334063,0.61642896765115,0.537182889719687,0.112085143993527,0,0,0,0,0,0,0.335032530668698,0,0,0,0.828831026872071,0.24538298343828,0,0,8.94274704582471,12.6684582045985,7.88512075169673,7.37990914454093,1.20378439891088,15.9185252839189,0,2.65690239414175,0.921845842708516,6.51627108510621,0.195801157462741,0.343143423810856,0.620304078368662,0,0.106727557803444,2.72814814301633,3.32870879020994,2.11673205330776,17.6156543551332,19.0292846877197,23.2947878379451,8.45718385087626,17.9097537173346,17.5330774046532,10.3892646511494,1.07946785661859,3.19611105563629,1.23190734020714,1.03850885836724,1.74315567689939,0.241718899183244,9.82481704486096,0.920809889358963,1.83703117063371,0.182091168006717,2.22911505431021,0,0,0,0,0,0,1.87103075804167,1.0795795805107,10.7959076883203,0,0,0,0.831076008928724,0,0,0,0,0,0,0.309123034943167,0,0.082509499920588,4.59412430396938,4.55042172225565,22.4957501781823,0.096670718292122,0.154048617114644,0.460511024178389,0.689182862422653,0.537101224341368,0.290033387828457,0.170453254832202,0.445160178233687,2.97512847649761,4.03599141466723,3.31793052485919,0.50578890427775,0.464845549297286,17.9443037693465,0,0,0.532306030317022,0.869932992075073,1.8532421910392,1.71749864090389,0.372158369359667,0,0.38126038784765,0,0,0.318203247925937,1.56989728039846,0.539617372749944,0.823611089208164,0.235624804691373,0.606547444719948,3.17020642346017,0.421258456238981,0,1.21856744815642,2.11300293513511,1.63799893689583,2.40389234321312,0,0,3.98063385144732,8.76901770507525,0,0.655894752046633,2.02910376962704,2.478587984798,0.845086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|phase1_expression=22.3464406502785,22.9087560563352,9.16203626623813,26.0190575718139,12.5149106439641,32.2765253917136,5.06599756336621,1.26343974685366,0,0.491467873003018,2.09340350391728,2.40285509343189,3.9565046734268,0.123766352960047,0,10.7572023432284,0.602694528023977,4.38186054232424,3.90346239032406,0.246242116153576,0.204000691244253,0.313454721478088,0,0.136874425072884,0.627713197974014,0,0,0,0,0.767658796194425,0.619264493264304,0,0.30120591877825,0.369754010166788,0,0,0,0.553995408531877,2.00544447470142,0.217010870715852,0.223915474239924,0.32389366601898,0,0.726991193897824,0,0,4.88100977501938,0,0,4.89077066947656,0.512321413058201,0.47296445977717,6.89491361473237,0,0,4.51781614902251,0.818718450173537,0,8.87643287875617,1.92557416245656,0.639337125799041,1.31940520074686,0.598390972864896,0.426224750532694,9.28669563611469,1.13477044938228,0,3.26623264833766,1.0429658368404,0.434377689410233,7.26479403160043,0.736555271975129,1.58231193720442,0,0,0,0.336985893439485,0.600707571366025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,1.15076305659177,1.80719576192283,3.50936537445123,1.88300474649071,2.3858578411533,3.40644409211845,0.378139268656271,0.443458794925128,0.175669571386252,0.130979075497713,0.728590576585084,0.370784442784429,0,0,0,0,0,0,1.59009925893364,0,3.12426451446835,3.39184765154406,2.51699661725944,3.02629846134074,4.38889429727302,2.84258435086262,1.77883131343355,4.01664735317604,6.0424397566372,1.52054421143703,3.66093086322254,5.51494620518803,6.48113558305408,3.21479021822687,2.02076435363553,1.23872628531654,0,0.949265659568129,3.84723662253855,0,0,0.872188104285069,18.3879622127268,16.8418580513891,8.07696002960635,18.9312169694217,1.77334191099179,1.68203280042692,6.4049397437823,7.4000264525148,0.622422070799533,0.538842688278752,0.980771418680752,0.605429710579726,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0,0.408308342509787,0.122834317311768,0.723280468230358,15.4440371446667,15.083282685992,0,0.718618141816238,0,0.250237039743928,0.831192346452549,4.38977620880838,8.58165828237255,7.21142682751665,1.13432183160021,15.606898304931,11.1049842185655,8.68920794754204,7.50227740211006,6.08009922506789,8.75977836155139,9.1197259602479,4.72573730275545,8.18470843354068,6.56327813034698,6.99579229681475,4.36444353410792,11.3603069605317,3.32481924151213,3.89989362314122,0.773043412653187,3.00020732649918,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,4.69348596989448,12.8648187638577,8.28809528114883,3.25057549622385,1.44375896333917,0.118306800039844,0,0.241011029883482,0.661763836394364,0.435758888184812,0,0,0,0.38474715694639,2.21446636387394,2.80483547606892,0.8231480226628,0,0,0,0,0,0,0.171567810298526,1.97550513735526,1.1240175325762,0.603173834469785,0.648119116109707,0,0,0,0,0.234817388471643,2.88732895522148,6.01881166349594,7.41991193714933,0,0,0,0,0,0,8.06314215354526,2.41017665312057,2.05984602216551,2.03443756959773,0.766765358330422,0.492663237895943,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0.411309970813294,0,0,0,0.43596006883328,0,0.646358578788889,0,1.690605505112,7.97814349754611,6.24044621468197,0,0,0.266422179016099,0.142977993658148,0.542621605391443,3.29296134712308,0,0.710783897485092,0,0,0,0,0,0,0,3.83399768786532,2.29723871668228,0,1.15825045334063,0.61642896765115,0.537182889719687,0.112085143993527,0,0,0,0,0,0,0.335032530668698,0,0,0,0.828831026872071,0.24538298343828,0,0,8.94274704582471,12.6684582045985,7.88512075169673,7.37990914454093,1.20378439891088,15.9185252839189,0,2.65690239414175,0.921845842708516,6.51627108510621,0.195801157462741,0.343143423810856,0.620304078368662,0,0.106727557803444,2.72814814301633,3.32870879020994,2.11673205330776,17.6156543551332,19.0292846877197,23.2947878379451,8.45718385087626,17.9097537173346,17.5330774046532,10.3892646511494,1.07946785661859,3.19611105563629,1.23190734020714,1.03850885836724,1.74315567689939,0.241718899183244,9.82481704486096,0.920809889358963,1.83703117063371,0.182091168006717,2.22911505431021,0,0,0,0,0,0,1.87103075804167,1.0795795805107,10.7959076883203,0,0,0,0.831076008928724,0,0,0,0,0,0,0.309123034943167,0,0.082509499920588,4.59412430396938,4.55042172225565,22.4957501781823,0.096670718292122,0.154048617114644,0.460511024178389,0.689182862422653,0.537101224341368,0.290033387828457,0.170453254832202,0.445160178233687,2.97512847649761,4.03599141466723,3.31793052485919,0.50578890427775,0.464845549297286,17.9443037693465,0,0,0.532306030317022,0.869932992075073,1.8532421910392,1.71749864090389,0.372158369359667,0,0.38126038784765,0,0,0.318203247925937,1.56989728039846,0.539617372749944,0.823611089208164,0.235624804691373,0.606547444719948,3.17020642346017,0.421258456238981,0,1.21856744815642,2.11300293513511,1.63799893689583,2.40389234321312,0,0,3.98063385144732,8.76901770507525,0,0.655894752046633,2.02910376962704,2.478587984798,0.845086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| ||
|short_description=p@chr15:39881997..39882024,+ | |||
}} | }} |
Latest revision as of 01:17, 25 July 2015
Short description: | p@chr15:39881997..39882024, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39881997..39882024, + |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.28e-19 | 76 |
endothelial cell | 3.19e-14 | 36 |
endothelial cell of vascular tree | 9.82e-14 | 24 |
preadipocyte | 1.12e-11 | 12 |
meso-epithelial cell | 1.25e-10 | 45 |
skin fibroblast | 9.06e-10 | 23 |
blood vessel endothelial cell | 2.33e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.33e-09 | 18 |
extraembryonic cell | 2.40e-09 | 19 |
somatic stem cell | 5.99e-09 | 433 |
multi fate stem cell | 7.79e-09 | 427 |
stem cell | 3.20e-08 | 441 |
lining cell | 4.17e-08 | 58 |
barrier cell | 4.17e-08 | 58 |
mesodermal cell | 1.48e-07 | 121 |
fat cell | 2.62e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.05e-07 | 5 |
myotonic disease | 8.05e-07 | 5 |
muscle tissue disease | 8.05e-07 | 5 |
myopathy | 8.05e-07 | 5 |
muscular disease | 8.05e-07 | 5 |
myotonic dystrophy | 8.05e-07 | 5 |