FFCP PHASE1:Hg19::chr15:83954702..83954728,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:83954702..83954728,- | |||
|coexpression_cluster_id=C161 | |||
|description=CAGE_peak_at_chr15:83954702..83954728,- | |description=CAGE_peak_at_chr15:83954702..83954728,- | ||
|id=chr15:83954702..83954728,- | |id=chr15:83954702..83954728,- | ||
|ontology_enrichment_celltype=CL:0000076!2.90e-19!62;CL:0002076!6.69e-19!43;CL:0002159!5.06e-17!13;CL:0000066!2.10e-16!254;CL:0002368!8.80e-14!13;CL:0000223!1.61e-13!59;CL:0002202!1.03e-12!9;CL:0002632!1.03e-12!9;CL:0000077!1.08e-10!19;CL:0002621!7.95e-09!3;CL:0000220!1.04e-08!246;CL:0002321!1.50e-08!248;CL:0002328!2.53e-08!3;CL:0000362!6.16e-08!8;CL:0000068!6.71e-08!3;CL:0000069!6.71e-08!3;CL:0000307!6.71e-08!3;CL:0000377!6.71e-08!3;CL:0002166!1.23e-07!3;CL:0002251!1.28e-07!21;CL:0000240!9.44e-07!6;CL:0000311!9.44e-07!6;CL:0000079!9.44e-07!6;CL:0000237!9.44e-07!6;CL:0000036!9.44e-07!6;CL:0000357!9.44e-07!6;CL:0000114!9.44e-07!6 | |ontology_enrichment_celltype=CL:0000076!2.90e-19!62;CL:0002076!6.69e-19!43;CL:0002159!5.06e-17!13;CL:0000066!2.10e-16!254;CL:0002368!8.80e-14!13;CL:0000223!1.61e-13!59;CL:0002202!1.03e-12!9;CL:0002632!1.03e-12!9;CL:0000077!1.08e-10!19;CL:0002621!7.95e-09!3;CL:0000220!1.04e-08!246;CL:0002321!1.50e-08!248;CL:0002328!2.53e-08!3;CL:0000362!6.16e-08!8;CL:0000068!6.71e-08!3;CL:0000069!6.71e-08!3;CL:0000307!6.71e-08!3;CL:0000377!6.71e-08!3;CL:0002166!1.23e-07!3;CL:0002251!1.28e-07!21;CL:0000240!9.44e-07!6;CL:0000311!9.44e-07!6;CL:0000079!9.44e-07!6;CL:0000237!9.44e-07!6;CL:0000036!9.44e-07!6;CL:0000357!9.44e-07!6;CL:0000114!9.44e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002621;2.59e-18;3!CL:0002328;3.95e-17;3!CL:0000362;1.64e-15;9!CL:0002202;3.20e-15;9!CL:0002632;3.20e-15;9!CL:0002368;7.46e-15;13!CL:0002159;7.35e-14;14!CL:0000317;2.95e-12;2!CL:1000448;2.95e-12;2!CL:0002308;2.95e-12;2!CL:0002140;2.95e-12;2!CL:0002076;7.80e-12;42!CL:0000312;9.46e-11;5!CL:0000082;5.67e-10;19!CL:0000240;4.90e-09;6!CL:0000311;4.90e-09;6!CL:0000079;4.90e-09;6!CL:0000237;4.90e-09;6!CL:0000077;1.72e-07;19!CL:0000076;5.76e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,2.31e-18,3;CL:0002328,3.34e-17,3;CL:0000362,1.54e-15,9;CL:0002202,2.67e-15,9;CL:0002632,2.67e-15,9;CL:0002368,6.84e-15,13;CL:0000076,9.71e-15,63;CL:0002076,3.97e-14,42;CL:0002159,6.12e-14,14;CL:0000066,6.71e-13,253;CL:0000317,2.64e-12,2;CL:1000448,2.64e-12,2;CL:0002308,2.64e-12,2;CL:0002140,2.64e-12,2;CL:0000312,9.47e-11,5;CL:0000082,5.32e-10,19;CL:0000223,1.17e-09,58;CL:0000240,4.91e-09,6;CL:0000311,4.91e-09,6;CL:0000079,4.91e-09,6;CL:0000237,4.91e-09,6;CL:0000036,4.91e-09,6;CL:0000357,4.91e-09,6;CL:0000114,4.91e-09,6;CL:0000077,1.93e-07,19;CL:0002321,5.73e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000357;4.90e-09;6!CL:0000114;4.90e-09;6 | |||
|ontology_enrichment_disease=DOID:1749!5.37e-10!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!4.22e-10!169;UBERON:0000925!4.22e-10!169;UBERON:0006595!4.22e-10!169;UBERON:0005181!7.17e-10!35;UBERON:0001949!7.95e-09!3;UBERON:0005178!1.01e-08!34;UBERON:0002224!1.01e-08!34;UBERON:0004815!2.53e-08!3;UBERON:0002031!2.53e-08!3;UBERON:0001004!2.81e-08!72;UBERON:0001007!4.43e-08!155;UBERON:0001555!4.43e-08!155;UBERON:0007026!4.43e-08!155;UBERON:0003729!8.94e-08!5;UBERON:0005157!8.96e-08!51;UBERON:0007196!9.86e-08!14;UBERON:0001558!9.86e-08!14;UBERON:0005911!2.74e-07!82;UBERON:0000464!2.99e-07!104;UBERON:0004807!4.94e-07!28;UBERON:0000466!5.88e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0004807;2.83e-19;22!UBERON:0001949;2.59e-18;3!UBERON:0004815;3.95e-17;3!UBERON:0002031;3.95e-17;3!UBERON:0002419;2.95e-12;2!UBERON:0007771;2.95e-12;2!UBERON:0003297;2.95e-12;2!UBERON:0001821;2.95e-12;2!UBERON:0003487;2.95e-12;2!UBERON:0001820;2.95e-12;2!UBERON:0010371;1.63e-10;31!UBERON:0002185;1.72e-10;5!UBERON:0005911;3.52e-10;36!UBERON:0004802;5.67e-10;19!UBERON:0000115;5.67e-10;19!UBERON:0001003;3.24e-09;15!UBERON:0007376;3.24e-09;15!UBERON:0007196;4.77e-09;15!UBERON:0001558;4.77e-09;15!UBERON:0002048;1.55e-08;22!UBERON:0000117;1.55e-08;22!UBERON:0000171;1.55e-08;22!UBERON:0000170;1.55e-08;22!UBERON:0003929;4.08e-08;7!UBERON:0000485;1.26e-07;7!UBERON:0003729;2.26e-07;13!UBERON:0003350;3.77e-07;8!UBERON:0001828;3.77e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.31e-18,3;UBERON:0004815,3.34e-17,3;UBERON:0002031,3.34e-17,3;UBERON:0004807,7.26e-15,28;UBERON:0002419,2.64e-12,2;UBERON:0007771,2.64e-12,2;UBERON:0003297,2.64e-12,2;UBERON:0001821,2.64e-12,2;UBERON:0003487,2.64e-12,2;UBERON:0001820,2.64e-12,2;UBERON:0005089,2.64e-12,2;UBERON:0005088,2.64e-12,2;UBERON:0002185,1.56e-10,5;UBERON:0005911,2.04e-10,82;UBERON:0004802,5.32e-10,19;UBERON:0000115,5.32e-10,19;UBERON:0001003,3.13e-09,15;UBERON:0007376,3.13e-09,15;UBERON:0007383,3.13e-09,15;UBERON:0007196,4.30e-09,15;UBERON:0001558,4.30e-09,15;UBERON:0001004,1.22e-08,74;UBERON:0002048,1.47e-08,22;UBERON:0000117,1.47e-08,22;UBERON:0000171,1.47e-08,22;UBERON:0000170,1.47e-08,22;UBERON:0005597,1.47e-08,22;UBERON:0000118,1.47e-08,22;UBERON:0005153,2.56e-08,37;UBERON:0003729,2.26e-07,13;UBERON:0005178,3.48e-07,34;UBERON:0002224,3.48e-07,34;UBERON:0003350,3.61e-07,8;UBERON:0001828,3.61e-07,8;UBERON:0005181,5.91e-07,35 | |||
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|short_description=p@chr15:83954702..83954728,- | |short_description=p@chr15:83954702..83954728,- | ||
}} | }} |
Latest revision as of 05:00, 25 July 2015
Short description: | p@chr15:83954702..83954728, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:83954702..83954728, - |
Coexpression cluster: | C161_mesothelioma_Mesothelial_acute_mesenchymal_extraskeletal_renal_placenta |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 2.31e-18 | 3 |
bronchial epithelial cell | 3.34e-17 | 3 |
epidermal cell | 1.54e-15 | 9 |
epithelial cell of tracheobronchial tree | 2.67e-15 | 9 |
epithelial cell of lower respiratory tract | 2.67e-15 | 9 |
respiratory epithelial cell | 6.84e-15 | 13 |
squamous epithelial cell | 9.71e-15 | 63 |
endo-epithelial cell | 3.97e-14 | 42 |
general ecto-epithelial cell | 6.12e-14 | 14 |
epithelial cell | 6.71e-13 | 253 |
sebum secreting cell | 2.64e-12 | 2 |
epithelial cell of sweat gland | 2.64e-12 | 2 |
epithelial cell of skin gland | 2.64e-12 | 2 |
acinar cell of sebaceous gland | 2.64e-12 | 2 |
keratinocyte | 9.47e-11 | 5 |
epithelial cell of lung | 5.32e-10 | 19 |
endodermal cell | 1.17e-09 | 58 |
stratified squamous epithelial cell | 4.91e-09 | 6 |
keratin accumulating cell | 4.91e-09 | 6 |
stratified epithelial cell | 4.91e-09 | 6 |
keratinizing barrier epithelial cell | 4.91e-09 | 6 |
epithelial fate stem cell | 4.91e-09 | 6 |
stratified epithelial stem cell | 4.91e-09 | 6 |
surface ectodermal cell | 4.91e-09 | 6 |
mesothelial cell | 1.93e-07 | 19 |
embryonic cell | 5.73e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.31e-18 | 3 |
lower respiratory tract epithelium | 3.34e-17 | 3 |
epithelium of bronchus | 3.34e-17 | 3 |
respiratory system epithelium | 7.26e-15 | 28 |
skin gland | 2.64e-12 | 2 |
epidermis gland | 2.64e-12 | 2 |
gland of integumental system | 2.64e-12 | 2 |
sebaceous gland | 2.64e-12 | 2 |
skin sebaceous gland | 2.64e-12 | 2 |
sweat gland | 2.64e-12 | 2 |
sweat gland placode | 2.64e-12 | 2 |
sebaceous gland placode | 2.64e-12 | 2 |
bronchus | 1.56e-10 | 5 |
endo-epithelium | 2.04e-10 | 82 |
respiratory tract epithelium | 5.32e-10 | 19 |
lung epithelium | 5.32e-10 | 19 |
skin epidermis | 3.13e-09 | 15 |
outer epithelium | 3.13e-09 | 15 |
enveloping layer of ectoderm | 3.13e-09 | 15 |
tracheobronchial tree | 4.30e-09 | 15 |
lower respiratory tract | 4.30e-09 | 15 |
respiratory system | 1.22e-08 | 74 |
lung | 1.47e-08 | 22 |
respiratory tube | 1.47e-08 | 22 |
respiration organ | 1.47e-08 | 22 |
pair of lungs | 1.47e-08 | 22 |
lung primordium | 1.47e-08 | 22 |
lung bud | 1.47e-08 | 22 |
epithelial bud | 2.56e-08 | 37 |
mouth mucosa | 2.26e-07 | 13 |
thoracic cavity element | 3.48e-07 | 34 |
thoracic cavity | 3.48e-07 | 34 |
epithelium of mucosa | 3.61e-07 | 8 |
gingiva | 3.61e-07 | 8 |
thoracic segment organ | 5.91e-07 | 35 |