FFCP PHASE1:Hg19::chr16:86985423..86985448,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:86985423..86985448,- | |||
|description=CAGE_peak_at_chr16:86985423..86985448,- | |||
|id=chr16:86985423..86985448,- | |||
|ontology_enrichment_celltype=CL:0000055!5.47e-16!180;CL:0000057!1.60e-09!75;CL:0000144!3.57e-09!625;CL:0002371!2.26e-08!591;CL:0000548!3.18e-07!679;CL:0000004!3.18e-07!679;CL:0000255!3.18e-07!679;CL:0000222!3.82e-07!119;CL:0000012!5.47e-07!682;CL:0000220!9.31e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000064;9.02e-11;3!CL:0000067;9.02e-11;3!CL:0005012;9.02e-11;3!CL:0002304;9.02e-11;3!CL:0000188;7.63e-09;9!CL:0000056;1.39e-08;4!CL:0002363;2.12e-08;2!CL:0000680;4.05e-08;7!CL:0002367;7.18e-08;2!CL:0002583;1.81e-07;2!CL:0002552;3.68e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.11e-10,3;CL:0000067,1.11e-10,3;CL:0005012,1.11e-10,3;CL:0002304,1.11e-10,3;CL:0000515,1.17e-08,4;CL:0002363,1.69e-08,2;CL:0000008,1.69e-08,2;CL:0000188,2.09e-08,9;CL:0002367,6.20e-08,2;CL:0000057,8.77e-08,76;CL:0002583,1.35e-07,2;CL:0002552,3.75e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000515;1.39e-08;4!CL:0000008;2.12e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.43e-12!83;UBERON:0002329!4.43e-12!83;UBERON:0003077!4.43e-12!83;UBERON:0003059!4.43e-12!83;UBERON:0007282!4.43e-12!83;UBERON:0009618!4.43e-12!83;UBERON:0007285!4.43e-12!83;UBERON:0000075!1.05e-08!13;UBERON:0005944!1.05e-08!13;UBERON:0004288!1.05e-08!13;UBERON:0003089!1.05e-08!13;UBERON:0001444!8.76e-08!48;UBERON:0002203!2.75e-07!6;UBERON:0001768!2.75e-07!6;UBERON:0001801!3.14e-07!14;UBERON:0003129!4.99e-07!11;UBERON:0004290!5.48e-07!70;UBERON:0000481!5.77e-07!347;UBERON:0005256!6.86e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0001801;9.52e-15;14!UBERON:0002203;4.60e-14;6!UBERON:0001768;4.60e-14;6!UBERON:0002200;4.60e-14;6!UBERON:0001778;9.02e-11;3!UBERON:0001775;9.02e-11;3!UBERON:0000019;1.72e-10;19!UBERON:0000047;1.72e-10;19!UBERON:0004088;1.72e-10;19!UBERON:0010230;1.72e-10;19!UBERON:0000970;6.79e-10;20!UBERON:0001134;2.08e-09;16!UBERON:0002036;2.08e-09;16!UBERON:0002104;2.34e-09;21!UBERON:0001456;2.34e-09;21!UBERON:0000075;3.42e-09;16!UBERON:0001444;1.35e-08;48!UBERON:0000020;2.02e-08;23!UBERON:0003566;2.12e-08;2!UBERON:0001777;2.12e-08;2!UBERON:0000488;3.52e-08;4!UBERON:0001032;5.17e-08;24!UBERON:0004456;5.17e-08;24!UBERON:0005969;7.18e-08;2!UBERON:0003956;7.18e-08;2!UBERON:0007811;7.57e-08;52!UBERON:0000033;1.13e-07;50!UBERON:0006876;1.63e-07;11!UBERON:0011137;2.40e-07;11!UBERON:0010323;2.40e-07;11!UBERON:0000153;2.46e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001801,8.19e-15,14;UBERON:0002203,4.87e-14,6;UBERON:0001768,4.87e-14,6;UBERON:0002200,4.87e-14,6;UBERON:0000033,9.57e-14,56;UBERON:0001444,1.62e-12,49;UBERON:0000153,5.20e-12,62;UBERON:0007811,5.20e-12,62;UBERON:0001778,1.11e-10,3;UBERON:0001775,1.11e-10,3;UBERON:0000019,6.13e-10,20;UBERON:0000047,6.13e-10,20;UBERON:0010312,6.13e-10,20;UBERON:0004088,6.13e-10,20;UBERON:0010230,6.13e-10,20;UBERON:0003072,6.13e-10,20;UBERON:0004128,6.13e-10,20;UBERON:0003071,6.13e-10,20;UBERON:0000970,2.13e-09,21;UBERON:0002104,2.13e-09,21;UBERON:0000075,3.23e-09,16;UBERON:0001456,6.59e-09,22;UBERON:0003566,1.69e-08,2;UBERON:0001777,1.69e-08,2;UBERON:0000488,4.12e-08,4;UBERON:0000020,4.76e-08,24;UBERON:0001032,4.76e-08,24;UBERON:0004456,4.76e-08,24;UBERON:0011137,5.17e-08,14;UBERON:0005969,6.20e-08,2;UBERON:0003956,6.20e-08,2;UBERON:0010323,1.61e-07,11;UBERON:0006876,1.68e-07,11;UBERON:0005085,2.04e-07,31 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,1.23766352960047,0.662794751455832,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0.410623275218653,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0.622822248995575,0,0,0.434377689410233,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0.486634870302636,1.03988298880475,2.4390233720882,1.75669571386252,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.838998872419812,0,0,0.258416759169329,0.35576626268671,0.33472061276467,0.402829317109147,0,0,0.367663080345869,0,0,0,0,0,0,0.183201743930407,0,0,0,1.49091585508596,0,0.397227542439656,0,0.354668382198357,0,0,0.98667019366864,0,0.134710672069688,0.653847612453835,0.151357427644931,0,0,1.5608003841516,0,0.448346041655403,0.822041490506354,1.29498355494505,1.68540968042698,3.0623125688234,2.82518929817066,2.47981874821837,0,0.247266929278557,0,0,1.68336113954066,2.50237039743928,1.6623846929051,0,0.30648779579902,0.300476117813194,0.340296549480063,0.358779271377724,0.427114777637135,0,0,0,0,0.37223371266318,0,0,0,0,0.161646056818812,0,0,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,2.93227474779292,3.11980435583874,2.88662684050547,0,0.352226082707465,0.144366447761074,0,0.570762456703795,0,0,0,0,0,1.87467667973554,0.16798212819886,1.13420077793909,1.25381931783988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784917590417525,0.87192013766656,1.68678057388185,1.42198887333556,0,0,0.26593811658487,0,0.771622122786426,0,1.3321108950805,0,0,0,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,4.34343920002738,2.87666851570537,0.716243852959582,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,1.08506009479894,0,0.178428988797162,0,0,0,0,1.03473071292505,0,1.65932251687533,0,0.587403472388222,0,0,0,0,1.21251028578504,0,0,0,0,0,0,0,0,1.48418066444991,1.3878872442239,1.59805552781814,0.739144404124282,2.59627214591811,1.16210378459959,0,0,0,0.459257792658427,0.728364672026868,0,0,0,0,0,0,0,0.170093705276516,1.51141141271498,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0.193341436584244,1.07834031980251,1.22802939780904,1.10269257987624,0.107420244868274,0,1.02271952899321,0.267096106940212,0.330569830721956,0,0.510450849978337,0,0,0.31481234683064,0,0,0.532306030317022,0,0,0.429374660225974,0,0.316379424718726,0,0.255897791311334,0,0,0.78494864019923,0,0,0.117812402345686,1.41527737101321,0,0,0,0,0,0.272999822815972,0,0,0,0.66343897524122,0.438450885253763,0,0,0.811641507850816,0.30982349809975,0.845086807596724,0,0.196498082026242,0.35667105148125,0,0,0,1.51789269506286,2.44954304171488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0,0,0,2.14764233254525,0,0,0,0,0,0,0,13.3364388173564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569710279235006,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,1.32930774541437,1.98595173525299,4.08112793929393,1.19472429772959,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0.411125773940253,0.596143835108969,0,0.195551382734803,0.160317640503067,0,0,0,0,0,0.14405479798815,0,0,2.31037150325144,2.824276850433,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0.134366944973453,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.739202355635845,0,0,0,0,0,0,0,0.653174720218818,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,1.19403842309499,0.701139929541673,1.10961172300523,0.757612021100357,0,0,0,0.453692771289717,1.24349760466224,1.92211694986524,0.477890301491107,0,0.310525913752519,2.90294345488599,0.53168342911599,0,0.150257608997218,0,0,0.545545977607678,0.214821114084977,0,0,6.80047199927361,0,0.673498977531838,0,0,0,0.521988583930423,0.680117776536817,0,0.244736704506468,1.96997725189636,0,0,0.530067437837643,0.38582807654183,0,0,0.690860683462397,0.303859956177382,0,0.194860308839388,0,0,0,0.491545817507439,0,0.39997479170986,0,0,0.567515953566836,0.368211900503681,0,0,0,0,0,0,0,0,0.123935764259002,0,0.636008701306837,0,0,0.705351887381368,0,0,1.41696576325585,0.159633859057151,0,0,0,0,0,0,0,0,0,0.762764190934334,0.690359926060101,0.198916222116275,0,0.40341013740704,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0.171488009437418,0.0679697329768317,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0.828864656652147,1.53646629384555,0.691259661814092,0,0,0.0852134047591577,0,0.4582137370881,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| |||
|short_description=p@chr16:86985423..86985448,- | |||
}} |
Latest revision as of 13:09, 25 July 2015
Short description: | p@chr16:86985423..86985448, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:86985423..86985448, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.11e-10 | 3 |
ciliated epithelial cell | 1.11e-10 | 3 |
multi-ciliated epithelial cell | 1.11e-10 | 3 |
non-pigmented ciliary epithelial cell | 1.11e-10 | 3 |
skeletal muscle myoblast | 1.17e-08 | 4 |
keratocyte | 1.69e-08 | 2 |
migratory cranial neural crest cell | 1.69e-08 | 2 |
cell of skeletal muscle | 2.09e-08 | 9 |
trabecular meshwork cell | 6.20e-08 | 2 |
fibroblast | 8.77e-08 | 76 |
subcutaneous preadipocyte | 1.35e-07 | 2 |
fibroblast of gingiva | 3.75e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
anterior segment of eyeball | 8.19e-15 | 14 |
vasculature of eye | 4.87e-14 | 6 |
uvea | 4.87e-14 | 6 |
vasculature of head | 4.87e-14 | 6 |
head | 9.57e-14 | 56 |
subdivision of head | 1.62e-12 | 49 |
anterior region of body | 5.20e-12 | 62 |
craniocervical region | 5.20e-12 | 62 |
ciliary epithelium | 1.11e-10 | 3 |
ciliary body | 1.11e-10 | 3 |
camera-type eye | 6.13e-10 | 20 |
simple eye | 6.13e-10 | 20 |
immature eye | 6.13e-10 | 20 |
ocular region | 6.13e-10 | 20 |
eyeball of camera-type eye | 6.13e-10 | 20 |
optic cup | 6.13e-10 | 20 |
optic vesicle | 6.13e-10 | 20 |
eye primordium | 6.13e-10 | 20 |
eye | 2.13e-09 | 21 |
visual system | 2.13e-09 | 21 |
subdivision of skeletal system | 3.23e-09 | 16 |
face | 6.59e-09 | 22 |
head connective tissue | 1.69e-08 | 2 |
substantia propria of cornea | 1.69e-08 | 2 |
atypical epithelium | 4.12e-08 | 4 |
sense organ | 4.76e-08 | 24 |
sensory system | 4.76e-08 | 24 |
entire sense organ system | 4.76e-08 | 24 |
axial skeletal system | 5.17e-08 | 14 |
reticulum trabeculare | 6.20e-08 | 2 |
aqueous drainage system | 6.20e-08 | 2 |
cranial skeletal system | 1.61e-07 | 11 |
vasculature of organ | 1.68e-07 | 11 |
ectodermal placode | 2.04e-07 | 31 |