FFCP PHASE1:Hg19::chr17:39742822..39742850,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:39742822..39742850,+ | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_at_chr17:39742822..39742850,+ | |||
|id=chr17:39742822..39742850,+ | |||
|ontology_enrichment_celltype=CL:0002159!4.72e-31!13;CL:0002202!1.62e-20!9;CL:0002632!1.62e-20!9;CL:0002076!4.97e-20!43;CL:0002368!1.21e-18!13;CL:0002328!1.93e-16!3;CL:0000068!2.15e-16!3;CL:0000069!2.15e-16!3;CL:0000307!2.15e-16!3;CL:0000377!2.15e-16!3;CL:0002166!1.22e-15!3;CL:0000240!2.28e-14!6;CL:0000311!2.28e-14!6;CL:0000079!2.28e-14!6;CL:0000237!2.28e-14!6;CL:0000036!2.28e-14!6;CL:0000357!2.28e-14!6;CL:0000114!2.28e-14!6;CL:0000066!6.49e-14!254;CL:0000223!8.74e-14!59;CL:0002327!3.86e-12!4;CL:0000575!1.01e-11!2;CL:0002077!2.86e-11!33;CL:0000362!6.58e-11!8;CL:0000312!3.14e-10!5;CL:0000622!9.11e-10!5;CL:0000154!3.27e-08!6;CL:0002251!5.78e-08!21;CL:0000076!6.00e-08!62;CL:0000349!8.93e-08!3;CL:0002577!8.93e-08!3;CL:0002623!1.38e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002159;1.62e-52;14!CL:0000575;2.54e-31;2!CL:0000312;5.55e-28;5!CL:0002202;1.50e-27;9!CL:0002632;1.50e-27;9!CL:0000362;2.97e-27;9!CL:0000240;1.90e-23;6!CL:0000311;1.90e-23;6!CL:0000079;1.90e-23;6!CL:0000237;1.90e-23;6!CL:0002328;1.76e-21;3!CL:0000307;2.17e-21;3!CL:0002077;8.81e-21;34!CL:0002368;3.32e-19;13!CL:0000317;7.21e-09;2!CL:1000448;7.21e-09;2!CL:0002308;7.21e-09;2!CL:0002140;7.21e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.24e-52,14;CL:0000575,2.54e-31,2;CL:0000312,5.30e-28,5;CL:0002202,2.12e-27,9;CL:0002632,2.12e-27,9;CL:0000362,2.43e-27,9;CL:0000240,1.83e-23,6;CL:0000311,1.83e-23,6;CL:0000079,1.83e-23,6;CL:0000237,1.83e-23,6;CL:0000036,1.83e-23,6;CL:0000357,1.83e-23,6;CL:0000114,1.83e-23,6;CL:0002077,1.60e-21,34;CL:0002328,2.17e-21,3;CL:0000068,2.96e-21,3;CL:0000069,2.96e-21,3;CL:0000307,2.96e-21,3;CL:0000377,2.96e-21,3;CL:0002368,4.20e-19,13;CL:0000221,1.16e-09,72;CL:0000066,4.34e-09,253;CL:0000317,5.94e-09,2;CL:1000448,5.94e-09,2;CL:0002308,5.94e-09,2;CL:0002140,5.94e-09,2;CL:0000076,1.76e-08,63 | |||
|ontology_enrichment_development_v019=CL:0000357;1.90e-23;6!CL:0000114;1.90e-23;6!CL:0000377;2.17e-21;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004815!1.93e-16!3;UBERON:0002031!1.93e-16!3;UBERON:0000166!1.10e-13!21;UBERON:0007196!5.63e-13!14;UBERON:0001558!5.63e-13!14;UBERON:0000165!1.13e-12!28;UBERON:0000930!1.13e-12!28;UBERON:0005631!1.71e-12!14;UBERON:0000158!1.71e-12!14;UBERON:0002185!1.87e-12!4;UBERON:0001004!2.34e-12!72;UBERON:0001911!3.86e-12!4;UBERON:0005333!3.86e-12!4;UBERON:0008425!3.86e-12!4;UBERON:0005311!3.86e-12!4;UBERON:0001708!7.32e-12!4;UBERON:0001704!7.32e-12!4;UBERON:0003102!1.37e-11!95;UBERON:0001444!2.05e-10!48;UBERON:0000161!7.84e-10!35;UBERON:0003729!1.38e-09!5;UBERON:0004119!2.67e-08!169;UBERON:0000925!2.67e-08!169;UBERON:0006595!2.67e-08!169;UBERON:0004121!2.71e-08!169;UBERON:0002090!4.62e-08!6;UBERON:0000924!5.29e-08!173;UBERON:0006601!5.29e-08!173;UBERON:0000065!1.04e-07!53;UBERON:0001723!1.80e-07!3;UBERON:0001033!1.80e-07!3;UBERON:0010056!1.80e-07!3;UBERON:0000072!1.92e-07!46;UBERON:0003126!2.79e-07!7;UBERON:0001005!2.79e-07!7;UBERON:0000305!4.73e-07!7;UBERON:0003124!4.83e-07!7;UBERON:0000478!4.86e-07!24;UBERON:0004923!6.01e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.76e-21;3!UBERON:0002031;1.76e-21;3!UBERON:0007196;1.07e-16;15!UBERON:0001558;1.07e-16;15!UBERON:0001003;1.61e-16;15!UBERON:0007376;1.61e-16;15!UBERON:0000964;3.32e-16;4!UBERON:0010409;3.32e-16;4!UBERON:0002185;2.68e-13;5!UBERON:0000485;9.11e-10;7!UBERON:0003126;9.94e-10;7!UBERON:0001005;9.94e-10;7!UBERON:0002419;7.21e-09;2!UBERON:0007771;7.21e-09;2!UBERON:0003297;7.21e-09;2!UBERON:0001821;7.21e-09;2!UBERON:0003487;7.21e-09;2!UBERON:0001820;7.21e-09;2!UBERON:0005178;6.24e-08;34!UBERON:0002224;6.24e-08;34!UBERON:0010371;9.48e-08;31!UBERON:0003102;1.24e-07;50!UBERON:0000072;2.91e-07;37!UBERON:0010313;4.96e-07;10!UBERON:0005181;7.90e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,2.17e-21,3;UBERON:0002031,2.17e-21,3;UBERON:0007196,1.31e-16,15;UBERON:0001558,1.31e-16,15;UBERON:0001003,1.42e-16,15;UBERON:0007376,1.42e-16,15;UBERON:0007383,1.42e-16,15;UBERON:0000964,3.32e-16,4;UBERON:0010409,3.32e-16,4;UBERON:0004348,3.32e-16,4;UBERON:0005427,3.32e-16,4;UBERON:0002185,3.03e-13,5;UBERON:0003126,1.13e-09,7;UBERON:0001005,1.13e-09,7;UBERON:0002419,5.94e-09,2;UBERON:0007771,5.94e-09,2;UBERON:0003297,5.94e-09,2;UBERON:0001821,5.94e-09,2;UBERON:0003487,5.94e-09,2;UBERON:0001820,5.94e-09,2;UBERON:0005089,5.94e-09,2;UBERON:0005088,5.94e-09,2;UBERON:0005085,3.20e-08,31;UBERON:0005157,3.44e-08,47;UBERON:0000485,9.20e-08,9;UBERON:0005178,1.74e-07,34;UBERON:0002224,1.74e-07,34;UBERON:0005181,2.81e-07,35;UBERON:0003102,4.29e-07,99;UBERON:0010313,4.96e-07,10;UBERON:0002342,4.96e-07,10;UBERON:0005062,4.96e-07,10 | |||
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|short_description=p@chr17:39742822..39742850,+ | |||
}} | }} |
Latest revision as of 16:45, 25 July 2015
Short description: | p@chr17:39742822..39742850, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39742822..39742850, + |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 1.24e-52 | 14 |
corneal epithelial cell | 2.54e-31 | 2 |
keratinocyte | 5.30e-28 | 5 |
epithelial cell of tracheobronchial tree | 2.12e-27 | 9 |
epithelial cell of lower respiratory tract | 2.12e-27 | 9 |
epidermal cell | 2.43e-27 | 9 |
stratified squamous epithelial cell | 1.83e-23 | 6 |
keratin accumulating cell | 1.83e-23 | 6 |
stratified epithelial cell | 1.83e-23 | 6 |
keratinizing barrier epithelial cell | 1.83e-23 | 6 |
epithelial fate stem cell | 1.83e-23 | 6 |
stratified epithelial stem cell | 1.83e-23 | 6 |
surface ectodermal cell | 1.83e-23 | 6 |
ecto-epithelial cell | 1.60e-21 | 34 |
bronchial epithelial cell | 2.17e-21 | 3 |
duct epithelial cell | 2.96e-21 | 3 |
branched duct epithelial cell | 2.96e-21 | 3 |
tracheal epithelial cell | 2.96e-21 | 3 |
tracheoblast | 2.96e-21 | 3 |
respiratory epithelial cell | 4.20e-19 | 13 |
ectodermal cell | 1.16e-09 | 72 |
epithelial cell | 4.34e-09 | 253 |
sebum secreting cell | 5.94e-09 | 2 |
epithelial cell of sweat gland | 5.94e-09 | 2 |
epithelial cell of skin gland | 5.94e-09 | 2 |
acinar cell of sebaceous gland | 5.94e-09 | 2 |
squamous epithelial cell | 1.76e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 2.17e-21 | 3 |
epithelium of bronchus | 2.17e-21 | 3 |
tracheobronchial tree | 1.31e-16 | 15 |
lower respiratory tract | 1.31e-16 | 15 |
skin epidermis | 1.42e-16 | 15 |
outer epithelium | 1.42e-16 | 15 |
enveloping layer of ectoderm | 1.42e-16 | 15 |
cornea | 3.32e-16 | 4 |
eye surface | 3.32e-16 | 4 |
optic eminence | 3.32e-16 | 4 |
corneal primordium | 3.32e-16 | 4 |
bronchus | 3.03e-13 | 5 |
trachea | 1.13e-09 | 7 |
respiratory airway | 1.13e-09 | 7 |
skin gland | 5.94e-09 | 2 |
epidermis gland | 5.94e-09 | 2 |
gland of integumental system | 5.94e-09 | 2 |
sebaceous gland | 5.94e-09 | 2 |
skin sebaceous gland | 5.94e-09 | 2 |
sweat gland | 5.94e-09 | 2 |
sweat gland placode | 5.94e-09 | 2 |
sebaceous gland placode | 5.94e-09 | 2 |
ectodermal placode | 3.20e-08 | 31 |
epithelial fold | 3.44e-08 | 47 |
simple columnar epithelium | 9.20e-08 | 9 |
thoracic cavity element | 1.74e-07 | 34 |
thoracic cavity | 1.74e-07 | 34 |
thoracic segment organ | 2.81e-07 | 35 |
surface structure | 4.29e-07 | 99 |
neural crest-derived structure | 4.96e-07 | 10 |
neural crest | 4.96e-07 | 10 |
neural fold | 4.96e-07 | 10 |