FFCP PHASE1:Hg19::chr17:58499766..58499803,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:58499766..58499803,- | |||
|coexpression_cluster_id=C54 | |coexpression_cluster_id=C54 | ||
|description=CAGE_peak_at_chr17:58499766..58499803,- | |description=CAGE_peak_at_chr17:58499766..58499803,- | ||
|id=chr17:58499766..58499803,- | |id=chr17:58499766..58499803,- | ||
|ontology_enrichment_celltype=CL:0000451;7.69e-44;10!CL:0000990;6.51e-43;8!CL:0000840;1.73e-37;5!CL:0000453;1.09e-19;5!CL:0001014;1.21e-13;2!CL:0001016;1.21e-13;2!CL:0000784;9.28e-09;3!CL:0002032;1.77e-07;1!CL:0000557;1.77e-07;1!CL:0000037;3.51e-07;1!CL:0001024;3.51e-07;1 | |ontology_enrichment_celltype=CL:0000763!3.35e-25!112;CL:0000049!3.35e-25!112;CL:0002009!5.61e-21!65;CL:0000557!1.30e-19!71;CL:0002194!7.01e-19!63;CL:0000576!7.01e-19!63;CL:0000040!7.01e-19!63;CL:0000559!7.01e-19!63;CL:0000037!3.14e-17!172;CL:0000566!3.14e-17!172;CL:0000451!7.38e-17!10;CL:0000839!6.85e-16!70;CL:0000988!3.03e-15!182;CL:0000766!1.05e-14!76;CL:0002032!1.46e-14!165;CL:0000837!1.46e-14!165;CL:0000990!2.91e-14!8;CL:0000738!5.82e-11!140;CL:0002057!1.14e-10!42;CL:0000840!1.74e-10!5;CL:0001029!1.74e-10!5;CL:0000860!1.56e-09!45;CL:0002087!9.05e-09!119;CL:0000453!2.33e-08!5;CL:0002031!1.36e-07!124 | ||
| | |ontology_enrichment_celltype_v019=CL:0000451;7.69e-44;10!CL:0000990;6.51e-43;8!CL:0000840;1.73e-37;5!CL:0000453;1.09e-19;5!CL:0001014;1.21e-13;2!CL:0001016;1.21e-13;2!CL:0000784;9.28e-09;3!CL:0002032;1.77e-07;1!CL:0000557;1.77e-07;1!CL:0000037;3.51e-07;1!CL:0001024;3.51e-07;1 | ||
|ontology_enrichment_disease=DOID:8692;1.66e-25;31!DOID:1240;1.83e-14;39!DOID:2531;4.36e-08;51!DOID:0060083;4.36e-08;51!DOID:8552;3.51e-07;1!DOID:225;3.51e-07;1 | |ontology_enrichment_celltype_v019_2=CL:0000451,5.16e-44,10;CL:0000990,5.10e-43,8;CL:0000840,1.23e-37,5;CL:0001029,1.23e-37,5;CL:0000763,1.17e-27,108;CL:0000049,1.17e-27,108;CL:0000453,1.17e-19,5;CL:0000037,1.99e-19,168;CL:0000988,3.48e-18,177;CL:0002032,5.08e-17,161;CL:0000837,5.08e-17,161;CL:0001014,1.25e-13,2;CL:0001016,1.25e-13,2;CL:0000557,8.63e-13,67;CL:0002009,4.63e-12,61;CL:0000784,6.47e-09,3;CL:0002194,1.52e-08,59;CL:0000576,1.52e-08,59;CL:0000040,1.52e-08,59;CL:0000559,1.52e-08,59;CL:0000839,1.80e-07,66;CL:0001024,3.40e-07,1;CL:0000738,5.21e-07,136 | ||
|ontology_enrichment_uberon=UBERON:0002171;3.51e-07;1!UBERON:0006518;3.51e-07;1!UBERON:0008949;3.51e-07;1!UBERON:0000101;3.51e-07;1!UBERON:0002167;3.51e-07;1 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:8692!2.39e-09!31;DOID:1240!1.71e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.66e-25;31!DOID:1240;1.83e-14;39!DOID:2531;4.36e-08;51!DOID:0060083;4.36e-08;51!DOID:8552;3.51e-07;1!DOID:225;3.51e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.62e-26,31;DOID:1240,1.95e-20,39;DOID:2531,4.43e-15,51;DOID:0060083,4.43e-15,51;DOID:8552,2.66e-07,1;DOID:225,3.62e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.70e-20!115;UBERON:0002390!5.31e-19!102;UBERON:0003061!5.31e-19!102;UBERON:0002371!2.45e-18!80;UBERON:0002193!8.12e-17!112;UBERON:0001474!3.51e-16!86;UBERON:0002405!1.91e-13!115;UBERON:0004765!5.41e-12!101;UBERON:0001434!5.41e-12!101;UBERON:0002204!7.64e-09!167;UBERON:0001049!1.42e-08!57;UBERON:0005068!1.42e-08!57;UBERON:0006241!1.42e-08!57;UBERON:0007135!1.42e-08!57;UBERON:0003075!8.55e-07!86;UBERON:0007284!8.55e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;3.51e-07;1!UBERON:0006518;3.51e-07;1!UBERON:0008949;3.51e-07;1!UBERON:0000101;3.51e-07;1!UBERON:0002167;3.51e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.64e-13,76;UBERON:0001474,1.03e-11,82;UBERON:0004765,1.95e-10,90;UBERON:0002405,5.14e-10,93;UBERON:0002390,2.27e-09,98;UBERON:0003061,2.27e-09,98;UBERON:0001434,3.95e-09,100;UBERON:0002193,2.94e-08,108;UBERON:0002171,3.01e-07,1;UBERON:0006518,3.01e-07,1;UBERON:0008949,3.01e-07,1;UBERON:0000101,3.01e-07,1;UBERON:0002167,3.01e-07,1 | |||
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|short_description=p@chr17:58499766..58499803,- | |short_description=p@chr17:58499766..58499803,- | ||
}} | }} |
Latest revision as of 19:33, 25 July 2015
Short description: | p@chr17:58499766..58499803, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:58499766..58499803, - |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dendritic cell | 5.16e-44 | 10 |
conventional dendritic cell | 5.10e-43 | 8 |
immature conventional dendritic cell | 1.23e-37 | 5 |
common dendritic progenitor | 1.23e-37 | 5 |
myeloid cell | 1.17e-27 | 108 |
common myeloid progenitor | 1.17e-27 | 108 |
Langerhans cell | 1.17e-19 | 5 |
hematopoietic stem cell | 1.99e-19 | 168 |
hematopoietic cell | 3.48e-18 | 177 |
hematopoietic oligopotent progenitor cell | 5.08e-17 | 161 |
hematopoietic multipotent progenitor cell | 5.08e-17 | 161 |
CD1a-positive Langerhans cell | 1.25e-13 | 2 |
immature CD1a-positive Langerhans cell | 1.25e-13 | 2 |
granulocyte monocyte progenitor cell | 8.63e-13 | 67 |
macrophage dendritic cell progenitor | 4.63e-12 | 61 |
plasmacytoid dendritic cell | 6.47e-09 | 3 |
monopoietic cell | 1.52e-08 | 59 |
monocyte | 1.52e-08 | 59 |
monoblast | 1.52e-08 | 59 |
promonocyte | 1.52e-08 | 59 |
myeloid lineage restricted progenitor cell | 1.80e-07 | 66 |
CD34-positive, CD38-negative hematopoietic stem cell | 3.40e-07 | 1 |
leukocyte | 5.21e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.64e-13 | 76 |
bone element | 1.03e-11 | 82 |
skeletal element | 1.95e-10 | 90 |
immune system | 5.14e-10 | 93 |
hematopoietic system | 2.27e-09 | 98 |
blood island | 2.27e-09 | 98 |
skeletal system | 3.95e-09 | 100 |
hemolymphoid system | 2.94e-08 | 108 |
lower lobe of right lung | 3.01e-07 | 1 |
right lung lobe | 3.01e-07 | 1 |
lower lobe of lung | 3.01e-07 | 1 |
lobe of lung | 3.01e-07 | 1 |
right lung | 3.01e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.62e-26 | 31 |
leukemia | 1.95e-20 | 39 |
hematologic cancer | 4.43e-15 | 51 |
immune system cancer | 4.43e-15 | 51 |
chronic myeloid leukemia | 2.66e-07 | 1 |
syndrome | 3.62e-07 | 1 |