FFCP PHASE1:Hg19::chr17:60248019..60248032,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:60248019..60248032,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr17:60248019..60248032,+ | |description=CAGE_peak_at_chr17:60248019..60248032,+ | ||
|id=chr17:60248019..60248032,+ | |id=chr17:60248019..60248032,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.11e-114!42;CL:0000860!1.59e-106!45;CL:0002009!1.73e-83!65;CL:0002194!1.17e-81!63;CL:0000576!1.17e-81!63;CL:0000040!1.17e-81!63;CL:0000559!1.17e-81!63;CL:0000557!7.38e-76!71;CL:0000839!8.03e-73!70;CL:0000766!2.22e-70!76;CL:0000763!1.15e-59!112;CL:0000049!1.15e-59!112;CL:0000738!4.20e-46!140;CL:0002087!7.58e-45!119;CL:0002031!2.98e-40!124;CL:0000037!4.17e-40!172;CL:0000566!4.17e-40!172;CL:0002032!7.02e-38!165;CL:0000837!7.02e-38!165;CL:0000988!1.94e-37!182;CL:0000134!9.82e-15!358;CL:0002320!2.79e-14!365;CL:0000219!1.12e-12!390;CL:0000034!5.95e-11!444;CL:0000048!9.26e-11!430;CL:0000723!1.74e-10!436;CL:0000453!9.97e-08!5;CL:0000990!2.63e-07!8;CL:0000063!6.42e-07!578 | |ontology_enrichment_celltype=CL:0002057!1.11e-114!42;CL:0000860!1.59e-106!45;CL:0002009!1.73e-83!65;CL:0002194!1.17e-81!63;CL:0000576!1.17e-81!63;CL:0000040!1.17e-81!63;CL:0000559!1.17e-81!63;CL:0000557!7.38e-76!71;CL:0000839!8.03e-73!70;CL:0000766!2.22e-70!76;CL:0000763!1.15e-59!112;CL:0000049!1.15e-59!112;CL:0000738!4.20e-46!140;CL:0002087!7.58e-45!119;CL:0002031!2.98e-40!124;CL:0000037!4.17e-40!172;CL:0000566!4.17e-40!172;CL:0002032!7.02e-38!165;CL:0000837!7.02e-38!165;CL:0000988!1.94e-37!182;CL:0000134!9.82e-15!358;CL:0002320!2.79e-14!365;CL:0000219!1.12e-12!390;CL:0000034!5.95e-11!444;CL:0000048!9.26e-11!430;CL:0000723!1.74e-10!436;CL:0000453!9.97e-08!5;CL:0000990!2.63e-07!8;CL:0000063!6.42e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.26e-134;33!CL:0002057;3.26e-134;33!CL:0000473;8.84e-92;39!CL:0000234;8.84e-92;39!CL:0000576;5.43e-72;48!CL:0000766;1.69e-40;69!CL:0002087;1.53e-19;104!CL:0000763;2.98e-19;100!CL:0000738;8.90e-12;136!CL:0000319;1.81e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.58e-134,42;CL:0002057,7.58e-134,42;CL:0000473,1.57e-116,48;CL:0000234,1.57e-116,48;CL:0002194,2.80e-92,59;CL:0000576,2.80e-92,59;CL:0000040,2.80e-92,59;CL:0000559,2.80e-92,59;CL:0002009,3.78e-89,61;CL:0000839,3.86e-82,66;CL:0000557,7.33e-81,67;CL:0000766,5.39e-75,72;CL:0000763,1.28e-48,108;CL:0000049,1.28e-48,108;CL:0002087,2.17e-45,115;CL:0002031,2.61e-43,120;CL:0000738,1.13e-37,136;CL:0002032,4.36e-31,161;CL:0000837,4.36e-31,161;CL:0000037,1.37e-29,168;CL:0000988,7.71e-28,177;CL:0000134,2.32e-11,354;CL:0002320,4.88e-11,361;CL:0000219,6.73e-10,386;CL:0000048,1.68e-08,427;CL:0000723,2.63e-08,433;CL:0000034,4.67e-08,441;CL:0000319,1.64e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002057;3.74e-102;42!CL:0000049;1.80e-14;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3030;1.81e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.64e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.56e-66!80;UBERON:0001474!2.19e-61!86;UBERON:0002390!1.16e-56!102;UBERON:0003061!1.16e-56!102;UBERON:0004765!3.65e-51!101;UBERON:0001434!3.65e-51!101;UBERON:0002193!6.54e-51!112;UBERON:0002405!5.24e-44!115;UBERON:0002204!7.41e-28!167;UBERON:0003081!1.74e-22!216;UBERON:0002384!1.16e-13!375 | |ontology_enrichment_uberon=UBERON:0002371!1.56e-66!80;UBERON:0001474!2.19e-61!86;UBERON:0002390!1.16e-56!102;UBERON:0003061!1.16e-56!102;UBERON:0004765!3.65e-51!101;UBERON:0001434!3.65e-51!101;UBERON:0002193!6.54e-51!112;UBERON:0002405!5.24e-44!115;UBERON:0002204!7.41e-28!167;UBERON:0003081!1.74e-22!216;UBERON:0002384!1.16e-13!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.54e-71,76;UBERON:0001474,2.23e-65,82;UBERON:0004765,3.33e-59,90;UBERON:0002405,3.69e-57,93;UBERON:0002390,5.01e-54,98;UBERON:0003061,5.01e-54,98;UBERON:0001434,7.35e-53,100;UBERON:0002193,1.28e-48,108;UBERON:0002204,8.50e-30,167;UBERON:0003081,1.21e-23,203;UBERON:0000926,2.02e-13,315;UBERON:0004120,2.02e-13,315;UBERON:0006603,2.02e-13,315;UBERON:0002384,1.35e-10,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,1.10799081706375,0.601633342410425,1.30206522429511,0,0,0,1.45398238779565,2.26725566213286,0.242584061187816,4.64858073811369,3.28934310417461,4.64559556342655,11.507695692886,7.94098190240212,11.3511470346521,32.0613483085055,22.5919639254339,10.8341189275473,3.01187743268168,6.27684145133045,5.61808711112712,62.1350301512932,53.5951475217076,29.4095077867559,2.63881040149373,2.39356389145958,0,16.5419266018293,20.9932533135722,11.2108004819203,5.02497330513487,3.65038042894141,6.95004303056373,9.08099253950053,21.3601028872788,18.9877432464531,0,0,0,0.336985893439485,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738832686744051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0.194860308839388,0.132864840313363,0,0,1.47463745252232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,1.10799081706375,0.601633342410425,1.30206522429511,0,0,0,1.45398238779565,2.26725566213286,0.242584061187816,4.64858073811369,3.28934310417461,4.64559556342655,11.507695692886,7.94098190240212,11.3511470346521,32.0613483085055,22.5919639254339,10.8341189275473,3.01187743268168,6.27684145133045,5.61808711112712,62.1350301512932,53.5951475217076,29.4095077867559,2.63881040149373,2.39356389145958,0,16.5419266018293,20.9932533135722,11.2108004819203,5.02497330513487,3.65038042894141,6.95004303056373,9.08099253950053,21.3601028872788,18.9877432464531,0,0,0,0.336985893439485,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738832686744051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0.194860308839388,0.132864840313363,0,0,1.47463745252232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:60248019..60248032,+ | |short_description=p@chr17:60248019..60248032,+ | ||
}} | }} |
Latest revision as of 19:38, 25 July 2015
Short description: | p@chr17:60248019..60248032, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:60248019..60248032, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.58e-134 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.58e-134 | 42 |
defensive cell | 1.57e-116 | 48 |
phagocyte | 1.57e-116 | 48 |
monopoietic cell | 2.80e-92 | 59 |
monocyte | 2.80e-92 | 59 |
monoblast | 2.80e-92 | 59 |
promonocyte | 2.80e-92 | 59 |
macrophage dendritic cell progenitor | 3.78e-89 | 61 |
myeloid lineage restricted progenitor cell | 3.86e-82 | 66 |
granulocyte monocyte progenitor cell | 7.33e-81 | 67 |
myeloid leukocyte | 5.39e-75 | 72 |
myeloid cell | 1.28e-48 | 108 |
common myeloid progenitor | 1.28e-48 | 108 |
nongranular leukocyte | 2.17e-45 | 115 |
hematopoietic lineage restricted progenitor cell | 2.61e-43 | 120 |
leukocyte | 1.13e-37 | 136 |
hematopoietic oligopotent progenitor cell | 4.36e-31 | 161 |
hematopoietic multipotent progenitor cell | 4.36e-31 | 161 |
hematopoietic stem cell | 1.37e-29 | 168 |
hematopoietic cell | 7.71e-28 | 177 |
mesenchymal cell | 2.32e-11 | 354 |
connective tissue cell | 4.88e-11 | 361 |
motile cell | 6.73e-10 | 386 |
multi fate stem cell | 1.68e-08 | 427 |
somatic stem cell | 2.63e-08 | 433 |
stem cell | 4.67e-08 | 441 |
mucus secreting cell | 1.64e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.54e-71 | 76 |
bone element | 2.23e-65 | 82 |
skeletal element | 3.33e-59 | 90 |
immune system | 3.69e-57 | 93 |
hematopoietic system | 5.01e-54 | 98 |
blood island | 5.01e-54 | 98 |
skeletal system | 7.35e-53 | 100 |
hemolymphoid system | 1.28e-48 | 108 |
musculoskeletal system | 8.50e-30 | 167 |
lateral plate mesoderm | 1.21e-23 | 203 |
mesoderm | 2.02e-13 | 315 |
mesoderm-derived structure | 2.02e-13 | 315 |
presumptive mesoderm | 2.02e-13 | 315 |
connective tissue | 1.35e-10 | 371 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.64e-07 | 1 |