FFCP PHASE1:Hg19::chr18:21478996..21479008,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:21478996..21479008,- | |||
|coexpression_cluster_id=C363 | |coexpression_cluster_id=C363 | ||
|description=CAGE_peak_at_chr18:21478996..21479008,- | |description=CAGE_peak_at_chr18:21478996..21479008,- | ||
|id=chr18:21478996..21479008,- | |id=chr18:21478996..21479008,- | ||
|ontology_enrichment_celltype=CL:0000066!5.32e-25!254;CL:0002076!1.91e-21!43;CL:0002159!7.54e-15!13;CL:0000223!2.86e-14!59;CL:0000076!3.23e-11!62;CL:0002621!7.06e-11!3;CL:0002368!7.42e-11!13;CL:0000240!2.64e-09!6;CL:0000311!2.64e-09!6;CL:0000079!2.64e-09!6;CL:0000237!2.64e-09!6;CL:0000036!2.64e-09!6;CL:0000357!2.64e-09!6;CL:0000114!2.64e-09!6;CL:0002251!2.06e-08!21;CL:0002327!3.71e-08!4;CL:0000063!2.81e-07!578;CL:0000575!3.38e-07!2;CL:0000362!7.45e-07!8 | |ontology_enrichment_celltype=CL:0000066!5.32e-25!254;CL:0002076!1.91e-21!43;CL:0002159!7.54e-15!13;CL:0000223!2.86e-14!59;CL:0000076!3.23e-11!62;CL:0002621!7.06e-11!3;CL:0002368!7.42e-11!13;CL:0000240!2.64e-09!6;CL:0000311!2.64e-09!6;CL:0000079!2.64e-09!6;CL:0000237!2.64e-09!6;CL:0000036!2.64e-09!6;CL:0000357!2.64e-09!6;CL:0000114!2.64e-09!6;CL:0002251!2.06e-08!21;CL:0002327!3.71e-08!4;CL:0000063!2.81e-07!578;CL:0000575!3.38e-07!2;CL:0000362!7.45e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002621;2.54e-32;3!CL:0000240;1.64e-28;6!CL:0000311;1.64e-28;6!CL:0000079;1.64e-28;6!CL:0000237;1.64e-28;6!CL:0002327;3.77e-24;4!CL:0000312;7.16e-20;5!CL:0002159;8.79e-19;14!CL:0002076;2.66e-17;42!CL:0002231;3.85e-15;3!CL:0002166;8.66e-15;3!CL:0002336;1.01e-11;1!CL:0002261;1.01e-11;1!CL:0002170;1.01e-11;1!CL:0000362;2.64e-11;9!CL:0002251;1.14e-08;20!CL:0002368;9.54e-08;13!CL:0002077;5.33e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,1.95e-32,3;CL:0000240,1.07e-28,6;CL:0000311,1.07e-28,6;CL:0000079,1.07e-28,6;CL:0000237,1.07e-28,6;CL:0000036,1.07e-28,6;CL:0000357,1.07e-28,6;CL:0000114,1.07e-28,6;CL:0002327,3.10e-24,4;CL:0000312,6.52e-20,5;CL:0002076,4.90e-19,42;CL:0002159,1.12e-18,14;CL:0002231,4.94e-15,3;CL:0002166,1.51e-14,3;CL:0000223,1.78e-13,58;CL:0002336,6.26e-12,1;CL:0002261,6.26e-12,1;CL:0002170,6.26e-12,1;CL:0000362,2.51e-11,9;CL:0000066,5.14e-11,253;CL:0002251,9.93e-09,20;CL:0002368,1.06e-07,13;CL:0002077,1.24e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000357;1.64e-28;6!CL:0000114;1.64e-28;6!CL:0000223;1.45e-08;58 | |||
|ontology_enrichment_disease=DOID:1749!5.02e-12!14 | |ontology_enrichment_disease=DOID:1749!5.02e-12!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!7.50e-13!14;UBERON:0000158!7.50e-13!14;UBERON:0001949!7.06e-11!3;UBERON:0001911!3.71e-08!4;UBERON:0005333!3.71e-08!4;UBERON:0008425!3.71e-08!4;UBERON:0005311!3.71e-08!4;UBERON:0001004!4.23e-08!72;UBERON:0004119!1.16e-07!169;UBERON:0000925!1.16e-07!169;UBERON:0006595!1.16e-07!169;UBERON:0003124!2.67e-07!7;UBERON:0004923!3.25e-07!57;UBERON:0000305!3.72e-07!7;UBERON:0000161!5.96e-07!35;UBERON:0000478!6.50e-07!24 | |ontology_enrichment_uberon=UBERON:0005631!7.50e-13!14;UBERON:0000158!7.50e-13!14;UBERON:0001949!7.06e-11!3;UBERON:0001911!3.71e-08!4;UBERON:0005333!3.71e-08!4;UBERON:0008425!3.71e-08!4;UBERON:0005311!3.71e-08!4;UBERON:0001004!4.23e-08!72;UBERON:0004119!1.16e-07!169;UBERON:0000925!1.16e-07!169;UBERON:0006595!1.16e-07!169;UBERON:0003124!2.67e-07!7;UBERON:0004923!3.25e-07!57;UBERON:0000305!3.72e-07!7;UBERON:0000161!5.96e-07!35;UBERON:0000478!6.50e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;2.54e-32;3!UBERON:0001911;3.77e-24;4!UBERON:0000486;2.63e-14;12!UBERON:0003929;3.10e-14;7!UBERON:0003729;3.17e-13;13!UBERON:0003350;1.58e-12;8!UBERON:0001828;1.58e-12;8!UBERON:0010371;4.83e-12;31!UBERON:0001708;2.49e-11;4!UBERON:0008895;2.49e-11;4!UBERON:0011159;3.04e-09;5!UBERON:0000344;1.14e-08;20!UBERON:0001003;5.58e-07;15!UBERON:0007376;5.58e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.95e-32,3;UBERON:0001911,3.10e-24,4;UBERON:0005333,3.10e-24,4;UBERON:0008425,3.10e-24,4;UBERON:0005311,3.10e-24,4;UBERON:0003729,2.54e-13,13;UBERON:0003350,1.43e-12,8;UBERON:0001828,1.43e-12,8;UBERON:0000076,1.96e-12,8;UBERON:0003102,2.70e-11,99;UBERON:0001708,3.78e-11,4;UBERON:0008895,3.78e-11,4;UBERON:0011159,4.23e-09,5;UBERON:0000344,9.93e-09,20;UBERON:0010188,9.99e-08,6;UBERON:0002539,9.99e-08,6;UBERON:0008816,9.99e-08,6;UBERON:0000161,2.92e-07,36;UBERON:0010371,5.14e-07,104;UBERON:0005153,5.15e-07,37;UBERON:0001003,5.41e-07,15;UBERON:0007376,5.41e-07,15;UBERON:0007383,5.41e-07,15 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70565194428616,1.63647672354501,2.00763216772303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95101027471052,3.37205259772859,1.3068766413512,1.66659201285353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00789276919316,1.13420077793909,2.7763142037883,1.45316969256981,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60911646545913,1.01289087829486,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,1.15699440752685,1.15314040419064,0.127612712494584,1.0115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,0,0,0,0,0.443430153536676,1.83778720165568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.23874448473769,0.296964680832639,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,2.66517388009317,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.293977192243133,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0.550285795565037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0.62164849248911,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70565194428616,1.63647672354501,2.00763216772303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95101027471052,3.37205259772859,1.3068766413512,1.66659201285353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00789276919316,1.13420077793909,2.7763142037883,1.45316969256981,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60911646545913,1.01289087829486,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,1.15699440752685,1.15314040419064,0.127612712494584,1.0115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,0,0,0,0,0.443430153536676,1.83778720165568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.23874448473769,0.296964680832639,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,2.66517388009317,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.293977192243133,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0.550285795565037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0.62164849248911,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:21478996..21479008,- | |short_description=p@chr18:21478996..21479008,- | ||
}} | }} |
Latest revision as of 23:59, 25 July 2015
Short description: | p@chr18:21478996..21479008, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:21478996..21479008, - |
Coexpression cluster: | C363_Mallassezderived_Gingival_Keratinocyte_Mammary_Prostate_Small_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 1.95e-32 | 3 |
stratified squamous epithelial cell | 1.07e-28 | 6 |
keratin accumulating cell | 1.07e-28 | 6 |
stratified epithelial cell | 1.07e-28 | 6 |
keratinizing barrier epithelial cell | 1.07e-28 | 6 |
epithelial fate stem cell | 1.07e-28 | 6 |
stratified epithelial stem cell | 1.07e-28 | 6 |
surface ectodermal cell | 1.07e-28 | 6 |
mammary gland epithelial cell | 3.10e-24 | 4 |
keratinocyte | 6.52e-20 | 5 |
endo-epithelial cell | 4.90e-19 | 42 |
general ecto-epithelial cell | 1.12e-18 | 14 |
epithelial cell of prostate | 4.94e-15 | 3 |
epithelial cell of Malassez | 1.51e-14 | 3 |
endodermal cell | 1.78e-13 | 58 |
buccal mucosa cell | 6.26e-12 | 1 |
endothelial cell of viscerocranial mucosa | 6.26e-12 | 1 |
keratinized cell of the oral mucosa | 6.26e-12 | 1 |
epidermal cell | 2.51e-11 | 9 |
epithelial cell | 5.14e-11 | 253 |
epithelial cell of alimentary canal | 9.93e-09 | 20 |
respiratory epithelial cell | 1.06e-07 | 13 |
ecto-epithelial cell | 1.24e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.95e-32 | 3 |
mammary gland | 3.10e-24 | 4 |
mammary bud | 3.10e-24 | 4 |
mammary ridge | 3.10e-24 | 4 |
mammary placode | 3.10e-24 | 4 |
mouth mucosa | 2.54e-13 | 13 |
epithelium of mucosa | 1.43e-12 | 8 |
gingiva | 1.43e-12 | 8 |
external ectoderm | 1.96e-12 | 8 |
surface structure | 2.70e-11 | 99 |
jaw skeleton | 3.78e-11 | 4 |
splanchnocranium | 3.78e-11 | 4 |
primary subdivision of cranial skeletal system | 4.23e-09 | 5 |
mucosa | 9.93e-09 | 20 |
protuberance | 9.99e-08 | 6 |
pharyngeal arch | 9.99e-08 | 6 |
embryonic head | 9.99e-08 | 6 |
orifice | 2.92e-07 | 36 |
ecto-epithelium | 5.14e-07 | 104 |
epithelial bud | 5.15e-07 | 37 |
skin epidermis | 5.41e-07 | 15 |
outer epithelium | 5.41e-07 | 15 |
enveloping layer of ectoderm | 5.41e-07 | 15 |