FFCP PHASE1:Hg19::chr18:73967203..73967220,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:73967203..73967220,- | |||
|coexpression_cluster_id=C97 | |coexpression_cluster_id=C97 | ||
|description=CAGE_peak_at_chr18:73967203..73967220,- | |description=CAGE_peak_at_chr18:73967203..73967220,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002569;4.60e-11;6!CL:1000415;6.67e-09;2 | |ontology_enrichment_celltype_v019=CL:0002569;4.60e-11;6!CL:1000415;6.67e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002569,6.24e-11,6;CL:1000415,5.49e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.52e-07;10!UBERON:0005564;4.52e-07;10 | |ontology_enrichment_development_v019=UBERON:0009117;4.52e-07;10!UBERON:0005564;4.52e-07;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;2.17e-16;4!DOID:1325;8.91e-10;7!DOID:3904;8.91e-10;7!DOID:3905;8.45e-08;9 | |ontology_enrichment_disease_v019=DOID:5409;2.17e-16;4!DOID:1325;8.91e-10;7!DOID:3904;8.91e-10;7!DOID:3905;8.45e-08;9 | ||
|ontology_enrichment_disease_v019_2=DOID:5409,1.93e-16,4;DOID:1325,8.35e-10,7;DOID:3904,8.35e-10,7;DOID:3905,8.03e-08,9 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001282;7.00e-17;1!UBERON:0009842;7.00e-17;1!UBERON:0003704;7.00e-17;1!UBERON:0001171;7.00e-17;1!UBERON:0001172;7.00e-17;1!UBERON:0003422;4.60e-11;6!UBERON:0002294;9.94e-10;7!UBERON:0001173;9.94e-10;7!UBERON:0003104;1.29e-09;7!UBERON:0009142;1.29e-09;7!UBERON:0000473;1.26e-08;8!UBERON:0002331;5.42e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0001282;7.00e-17;1!UBERON:0009842;7.00e-17;1!UBERON:0003704;7.00e-17;1!UBERON:0001171;7.00e-17;1!UBERON:0001172;7.00e-17;1!UBERON:0003422;4.60e-11;6!UBERON:0002294;9.94e-10;7!UBERON:0001173;9.94e-10;7!UBERON:0003104;1.29e-09;7!UBERON:0009142;1.29e-09;7!UBERON:0000473;1.26e-08;8!UBERON:0002331;5.42e-07;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,7.57e-17,1;UBERON:0009842,7.57e-17,1;UBERON:0003704,7.57e-17,1;UBERON:0001171,7.57e-17,1;UBERON:0001172,7.57e-17,1;UBERON:0003422,6.24e-11,6;UBERON:0000473,1.26e-08,8;UBERON:0002294,8.60e-08,9;UBERON:0001173,8.60e-08,9;UBERON:0004912,8.60e-08,9;UBERON:0002331,6.50e-07,10;UBERON:0000358,6.50e-07,10;UBERON:0000307,6.50e-07,10;UBERON:0000091,6.50e-07,10;UBERON:0000087,6.50e-07,10;UBERON:0007010,6.50e-07,10;UBERON:0007806,6.50e-07,10;UBERON:0008780,6.50e-07,10;UBERON:0005728,6.50e-07,10 | |||
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| ||
|short_description=p@chr18:73967203..73967220,- | |short_description=p@chr18:73967203..73967220,- | ||
}} | }} |
Latest revision as of 02:10, 26 July 2015
Short description: | p@chr18:73967203..73967220, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:73967203..73967220, - |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 6.24e-11 | 6 |
epithelial cell of gall bladder | 5.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 7.57e-17 | 1 |
acinus | 7.57e-17 | 1 |
intrahepatic bile duct | 7.57e-17 | 1 |
portal lobule | 7.57e-17 | 1 |
hepatic acinus | 7.57e-17 | 1 |
mesenchyme of umbilical cord | 6.24e-11 | 6 |
testis | 1.26e-08 | 8 |
biliary system | 8.60e-08 | 9 |
biliary tree | 8.60e-08 | 9 |
biliary bud | 8.60e-08 | 9 |
umbilical cord | 6.50e-07 | 10 |
blastocyst | 6.50e-07 | 10 |
blastula | 6.50e-07 | 10 |
bilaminar disc | 6.50e-07 | 10 |
inner cell mass | 6.50e-07 | 10 |
cleaving embryo | 6.50e-07 | 10 |
connecting stalk | 6.50e-07 | 10 |
inner cell mass derived epiblast | 6.50e-07 | 10 |
extraembryonic mesoderm | 6.50e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.93e-16 | 4 |
bronchus cancer | 8.35e-10 | 7 |
bronchogenic carcinoma | 8.35e-10 | 7 |
lung carcinoma | 8.03e-08 | 9 |