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FFCP PHASE1:Hg19::chr19:1584937..1584949,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=
|EntrezGene=
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=
|HGNC=
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=-13bp_to_M77818_5end
|association_with_transcript=-13bp_to_M77818_5end
|cluster_id=chr19:1584937..1584949,-
|coexpression_cluster_id=C2478
|coexpression_cluster_id=C2478
|description=CAGE_peak_1_at_M77818_5end
|description=CAGE_peak_1_at_M77818_5end
Line 9: Line 14:
|ontology_enrichment_celltype=CL:0000039!2.54e-25!7;CL:0000586!2.54e-25!7;CL:0002541!1.99e-22!3;CL:0002536!7.84e-15!2;CL:0000349!2.36e-10!3;CL:0002577!2.36e-10!3
|ontology_enrichment_celltype=CL:0000039!2.54e-25!7;CL:0000586!2.54e-25!7;CL:0002541!1.99e-22!3;CL:0002536!7.84e-15!2;CL:0000349!2.36e-10!3;CL:0002577!2.36e-10!3
|ontology_enrichment_celltype_v019=CL:0002541;7.10e-41;3!CL:0000349;1.88e-33;19!CL:0000039;9.36e-31;7!CL:0000586;9.36e-31;7!CL:0002577;2.32e-18;3!CL:0002536;8.32e-08;2
|ontology_enrichment_celltype_v019=CL:0002541;7.10e-41;3!CL:0000349;1.88e-33;19!CL:0000039;9.36e-31;7!CL:0000586;9.36e-31;7!CL:0002577;2.32e-18;3!CL:0002536;8.32e-08;2
|ontology_enrichment_celltype_v019_2=CL:0002541,6.64e-41,3;CL:0000349,1.93e-33,19;CL:0000039,9.73e-31,7;CL:0000586,9.73e-31,7;CL:0002577,2.32e-18,3;CL:0002536,9.19e-08,2
|ontology_enrichment_development_v019=UBERON:0009117;1.18e-21;10!UBERON:0005564;1.18e-21;10!UBERON:0003124;7.13e-15;1
|ontology_enrichment_development_v019=UBERON:0009117;1.18e-21;10!UBERON:0005564;1.18e-21;10!UBERON:0003124;7.13e-15;1
|ontology_enrichment_disease=DOID:114!9.67e-15!2;DOID:178!4.72e-08!1;DOID:326!4.72e-08!1;DOID:3978!4.72e-08!1;DOID:3394!4.72e-08!1;DOID:5844!4.72e-08!1;DOID:3095!6.33e-08!22;DOID:2994!6.33e-08!22;DOID:1287!8.25e-08!4
|ontology_enrichment_disease=DOID:114!9.67e-15!2;DOID:178!4.72e-08!1;DOID:326!4.72e-08!1;DOID:3978!4.72e-08!1;DOID:3394!4.72e-08!1;DOID:5844!4.72e-08!1;DOID:3095!6.33e-08!22;DOID:2994!6.33e-08!22;DOID:1287!8.25e-08!4
|ontology_enrichment_disease_v019=DOID:3095;5.25e-10;22!DOID:2994;5.25e-10;22!DOID:114;8.32e-08;2
|ontology_enrichment_disease_v019=DOID:3095;5.25e-10;22!DOID:2994;5.25e-10;22!DOID:114;8.32e-08;2
|ontology_enrichment_disease_v019_2=DOID:3095,5.31e-10,22;DOID:2994,5.31e-10,22;DOID:114,7.52e-08,2
|ontology_enrichment_uberon=UBERON:0005631!8.57e-49!14;UBERON:0000158!8.57e-49!14;UBERON:0003124!1.93e-36!7;UBERON:0000478!8.81e-28!24;UBERON:0003135!1.71e-22!11;UBERON:0000476!1.99e-22!3;UBERON:0000920!1.99e-22!3;UBERON:0000473!5.91e-22!8;UBERON:0001987!1.27e-16!4;UBERON:0004340!1.27e-16!4;UBERON:0000305!3.88e-16!7;UBERON:0004923!1.91e-15!57;UBERON:0000007!2.07e-14!2;UBERON:0004871!3.82e-14!8;UBERON:0003101!5.33e-11!22;UBERON:0000079!5.33e-11!22;UBERON:0003133!1.84e-10!48;UBERON:0003978!8.17e-10!3;UBERON:0009751!8.17e-10!3;UBERON:0000946!8.17e-10!3;UBERON:0002523!8.17e-10!3;UBERON:0005983!8.17e-10!3;UBERON:0002165!8.17e-10!3;UBERON:0002062!8.17e-10!3;UBERON:0007280!8.17e-10!3;UBERON:0005156!3.02e-08!59;UBERON:0000990!3.02e-08!59;UBERON:0000991!3.02e-08!21;UBERON:0009196!3.02e-08!21;UBERON:0009117!3.02e-08!21;UBERON:0005564!3.02e-08!21;UBERON:0000989!3.83e-08!1;UBERON:0008811!3.83e-08!1;UBERON:0006258!3.83e-08!1;UBERON:0005876!3.83e-08!1;UBERON:0004874!3.83e-08!1;UBERON:0007029!4.11e-08!1;UBERON:0005705!5.07e-08!1;UBERON:0008193!5.07e-08!1;UBERON:0002514!5.07e-08!1;UBERON:0003462!5.07e-08!1;UBERON:0008001!5.07e-08!1;UBERON:0007914!5.07e-08!1;UBERON:0003457!5.07e-08!1;UBERON:0009292!5.07e-08!1;UBERON:0007375!5.07e-08!1;UBERON:0003323!5.07e-08!1;UBERON:0002397!5.07e-08!1;UBERON:0001709!5.07e-08!1;UBERON:0004066!5.07e-08!1;UBERON:0002244!5.07e-08!1;UBERON:0005620!5.07e-08!1;UBERON:0004068!5.07e-08!1;UBERON:0004362!5.07e-08!1;UBERON:0002135!5.43e-08!1;UBERON:0002146!5.82e-08!1;UBERON:0005623!5.82e-08!1;UBERON:0004176!7.34e-08!22;UBERON:0003296!1.20e-07!4;UBERON:0010133!1.20e-07!4
|ontology_enrichment_uberon=UBERON:0005631!8.57e-49!14;UBERON:0000158!8.57e-49!14;UBERON:0003124!1.93e-36!7;UBERON:0000478!8.81e-28!24;UBERON:0003135!1.71e-22!11;UBERON:0000476!1.99e-22!3;UBERON:0000920!1.99e-22!3;UBERON:0000473!5.91e-22!8;UBERON:0001987!1.27e-16!4;UBERON:0004340!1.27e-16!4;UBERON:0000305!3.88e-16!7;UBERON:0004923!1.91e-15!57;UBERON:0000007!2.07e-14!2;UBERON:0004871!3.82e-14!8;UBERON:0003101!5.33e-11!22;UBERON:0000079!5.33e-11!22;UBERON:0003133!1.84e-10!48;UBERON:0003978!8.17e-10!3;UBERON:0009751!8.17e-10!3;UBERON:0000946!8.17e-10!3;UBERON:0002523!8.17e-10!3;UBERON:0005983!8.17e-10!3;UBERON:0002165!8.17e-10!3;UBERON:0002062!8.17e-10!3;UBERON:0007280!8.17e-10!3;UBERON:0005156!3.02e-08!59;UBERON:0000990!3.02e-08!59;UBERON:0000991!3.02e-08!21;UBERON:0009196!3.02e-08!21;UBERON:0009117!3.02e-08!21;UBERON:0005564!3.02e-08!21;UBERON:0000989!3.83e-08!1;UBERON:0008811!3.83e-08!1;UBERON:0006258!3.83e-08!1;UBERON:0005876!3.83e-08!1;UBERON:0004874!3.83e-08!1;UBERON:0007029!4.11e-08!1;UBERON:0005705!5.07e-08!1;UBERON:0008193!5.07e-08!1;UBERON:0002514!5.07e-08!1;UBERON:0003462!5.07e-08!1;UBERON:0008001!5.07e-08!1;UBERON:0007914!5.07e-08!1;UBERON:0003457!5.07e-08!1;UBERON:0009292!5.07e-08!1;UBERON:0007375!5.07e-08!1;UBERON:0003323!5.07e-08!1;UBERON:0002397!5.07e-08!1;UBERON:0001709!5.07e-08!1;UBERON:0004066!5.07e-08!1;UBERON:0002244!5.07e-08!1;UBERON:0005620!5.07e-08!1;UBERON:0004068!5.07e-08!1;UBERON:0004362!5.07e-08!1;UBERON:0002135!5.43e-08!1;UBERON:0002146!5.82e-08!1;UBERON:0005623!5.82e-08!1;UBERON:0004176!7.34e-08!22;UBERON:0003296!1.20e-07!4;UBERON:0010133!1.20e-07!4
|ontology_enrichment_uberon_v019=UBERON:0003124;7.10e-41;3!UBERON:0000920;7.10e-41;3!UBERON:0000478;1.79e-34;24!UBERON:0005631;3.97e-33;10!UBERON:0000158;3.97e-33;10!UBERON:0001987;3.17e-30;4!UBERON:0000473;5.76e-27;8!UBERON:0003135;1.02e-19;11!UBERON:0000991;1.80e-10;21!UBERON:0003101;5.25e-10;22!UBERON:0000079;5.25e-10;22!UBERON:0000305;2.07e-08;7
|ontology_enrichment_uberon_v019=UBERON:0003124;7.10e-41;3!UBERON:0000920;7.10e-41;3!UBERON:0000478;1.79e-34;24!UBERON:0005631;3.97e-33;10!UBERON:0000158;3.97e-33;10!UBERON:0001987;3.17e-30;4!UBERON:0000473;5.76e-27;8!UBERON:0003135;1.02e-19;11!UBERON:0000991;1.80e-10;21!UBERON:0003101;5.25e-10;22!UBERON:0000079;5.25e-10;22!UBERON:0000305;2.07e-08;7
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|short_description=p1@M77818
|short_description=p1@M77818
}}
}}

Latest revision as of 04:36, 26 July 2015

Short description:p1@M77818
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_M77818_5end
Coexpression cluster:C2478_testicular_chorionic_placenta_anaplastic_amniotic_choriocarcinoma_Placental
Association with transcript: -13bp_to_M77818_5end
EntrezGene:NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data