FFCP PHASE1:Hg19::chr19:47781063..47781077,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:47781063..47781077,+ | |||
|description=CAGE_peak_at_chr19:47781063..47781077,+ | |description=CAGE_peak_at_chr19:47781063..47781077,+ | ||
|id=chr19:47781063..47781077,+ | |id=chr19:47781063..47781077,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000222;5.92e-26;1!CL:0002262;1.07e-13;2!CL:1000398;1.07e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,8.28e-14,2;CL:1000398,8.28e-14,2 | |||
|ontology_enrichment_development_v019=UBERON:0004140;2.15e-26;1!UBERON:0004872;3.06e-15;7!UBERON:0006965;1.07e-13;2!UBERON:0005062;1.69e-07;4!UBERON:0007284;1.69e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.81e-19!115;UBERON:0001950!8.13e-16!20;UBERON:0002020!1.28e-15!34;UBERON:0003528!1.28e-15!34;UBERON:0001893!1.72e-15!34;UBERON:0001869!1.46e-14!32;UBERON:0002619!3.40e-14!22;UBERON:0002791!4.79e-14!33;UBERON:0002780!6.67e-14!41;UBERON:0001890!6.67e-14!41;UBERON:0006240!6.67e-14!41;UBERON:0003080!1.76e-13!42;UBERON:0001049!6.76e-13!57;UBERON:0005068!6.76e-13!57;UBERON:0006241!6.76e-13!57;UBERON:0007135!6.76e-13!57;UBERON:0002616!2.67e-12!59;UBERON:0000956!3.10e-12!25;UBERON:0000203!3.10e-12!25;UBERON:0000955!3.23e-12!69;UBERON:0006238!3.23e-12!69;UBERON:0000200!3.43e-11!6;UBERON:0001017!1.17e-10!82;UBERON:0003075!4.00e-10!86;UBERON:0007284!4.00e-10!86;UBERON:0005743!6.45e-10!86;UBERON:0002346!1.96e-09!90;UBERON:0002771!4.11e-09!3;UBERON:0001871!1.61e-08!7;UBERON:0000033!1.70e-08!123;UBERON:0000073!1.74e-08!94;UBERON:0001016!1.74e-08!94;UBERON:0003056!4.24e-08!61;UBERON:0000153!8.12e-08!129;UBERON:0007811!8.12e-08!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;5.92e-26;1!UBERON:0002146;5.92e-26;1!UBERON:0007195;5.92e-26;1!UBERON:0005623;5.92e-26;1!UBERON:0001281;1.07e-13;2!UBERON:0003497;1.07e-13;2!UBERON:0003909;1.07e-13;2!UBERON:0003835;1.07e-13;2!UBERON:0003978;1.41e-09;3!UBERON:0000946;1.41e-09;3!UBERON:0001280;1.41e-09;3!UBERON:0004647;1.41e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,7.62e-26,1;UBERON:0005623,7.62e-26,1;UBERON:0007195,9.79e-26,1;UBERON:0006834,1.26e-25,1;UBERON:0001281,8.28e-14,2;UBERON:0003497,8.28e-14,2;UBERON:0003909,8.28e-14,2;UBERON:0003835,8.28e-14,2;UBERON:0001280,1.19e-09,3;UBERON:0004647,1.19e-09,3;UBERON:0005171,1.19e-09,3;UBERON:0003978,1.54e-09,3;UBERON:0009751,1.54e-09,3;UBERON:0000946,1.54e-09,3;UBERON:0002523,1.54e-09,3;UBERON:0005983,1.54e-09,3;UBERON:0002165,1.54e-09,3;UBERON:0002062,1.54e-09,3;UBERON:0007280,1.54e-09,3 | |||
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| ||
|short_description=p@chr19:47781063..47781077,+ | |short_description=p@chr19:47781063..47781077,+ | ||
}} | }} |
Latest revision as of 15:28, 27 July 2015
Short description: | p@chr19:47781063..47781077, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:47781063..47781077, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 8.28e-14 | 2 |
endothelial cell of hepatic sinusoid | 8.28e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 7.62e-26 | 1 |
semi-lunar valve | 7.62e-26 | 1 |
stroma of bone marrow | 9.79e-26 | 1 |
uterus or analog | 1.26e-25 | 1 |
hepatic sinusoid | 8.28e-14 | 2 |
abdomen blood vessel | 8.28e-14 | 2 |
sinusoid | 8.28e-14 | 2 |
abdominal segment blood vessel | 8.28e-14 | 2 |
liver parenchyma | 1.19e-09 | 3 |
liver lobule | 1.19e-09 | 3 |
hepatic duct | 1.19e-09 | 3 |
valve | 1.54e-09 | 3 |
cardiac mesenchyme | 1.54e-09 | 3 |
cardial valve | 1.54e-09 | 3 |
tunica intima | 1.54e-09 | 3 |
heart layer | 1.54e-09 | 3 |
endocardium | 1.54e-09 | 3 |
endocardial cushion | 1.54e-09 | 3 |
presumptive endocardium | 1.54e-09 | 3 |