FFCP PHASE1:Hg19::chr19:48045004..48045009,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:48045004..48045009,- | |||
|description=CAGE_peak_at_chr19:48045004..48045009,- | |description=CAGE_peak_at_chr19:48045004..48045009,- | ||
|id=chr19:48045004..48045009,- | |id=chr19:48045004..48045009,- | ||
|ontology_enrichment_celltype=CL:0000838!9.06e-07!52 | |ontology_enrichment_celltype=CL:0000838!9.06e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0002536;5.32e-15;2!CL:0002577;1.44e-10;3!CL:0000349;4.48e-09;19!CL:0000037;2.09e-08;1!CL:0001024;2.09e-08;1!CL:0002127;4.56e-08;1!CL:0000911;4.56e-08;1!CL:0000814;4.56e-08;1 | |ontology_enrichment_celltype_v019=CL:0002536;5.32e-15;2!CL:0002577;1.44e-10;3!CL:0000349;4.48e-09;19!CL:0000037;2.09e-08;1!CL:0001024;2.09e-08;1!CL:0002127;4.56e-08;1!CL:0000911;4.56e-08;1!CL:0000814;4.56e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002536,3.61e-15,2;CL:0002577,1.41e-10,3;CL:0000349,4.07e-09,19;CL:0001024,2.33e-08,1;CL:0002127,4.41e-08,1;CL:0000914,4.41e-08,1;CL:0000911,4.41e-08,1;CL:0000814,4.41e-08,1;CL:0002042,4.41e-08,1;CL:0002039,4.41e-08,1;CL:0002040,4.41e-08,1;CL:0002041,4.41e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0003918;7.88e-07;10!UBERON:0007687;7.88e-07;10 | |ontology_enrichment_development_v019=UBERON:0003918;7.88e-07;10!UBERON:0007687;7.88e-07;10 | ||
|ontology_enrichment_disease=DOID:162!2.54e-13!235;DOID:14566!3.41e-13!239;DOID:0050686!3.72e-10!137;DOID:0050687!8.11e-08!143;DOID:2531!1.66e-07!51;DOID:0060083!1.66e-07!51;DOID:0060058!3.33e-07!10 | |ontology_enrichment_disease=DOID:162!2.54e-13!235;DOID:14566!3.41e-13!239;DOID:0050686!3.72e-10!137;DOID:0050687!8.11e-08!143;DOID:2531!1.66e-07!51;DOID:0060083!1.66e-07!51;DOID:0060058!3.33e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:0060060;4.56e-08;1!DOID:0060061;4.56e-08;1!DOID:8691;4.56e-08;1 | |ontology_enrichment_disease_v019=DOID:0060060;4.56e-08;1!DOID:0060061;4.56e-08;1!DOID:8691;4.56e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,3.83e-08,1;DOID:0060061,3.83e-08,1;DOID:8691,3.83e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000478!2.08e-07!24 | |ontology_enrichment_uberon=UBERON:0000478!2.08e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.93e-17;24!UBERON:0000305;1.88e-09;7!UBERON:0001282;2.09e-08;1!UBERON:0009842;2.09e-08;1!UBERON:0003704;2.09e-08;1!UBERON:0001171;2.09e-08;1!UBERON:0001172;2.09e-08;1!UBERON:0001987;3.90e-08;4!UBERON:0005631;9.44e-07;10!UBERON:0000158;9.44e-07;10!UBERON:0002331;9.82e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0000478;1.93e-17;24!UBERON:0000305;1.88e-09;7!UBERON:0001282;2.09e-08;1!UBERON:0009842;2.09e-08;1!UBERON:0003704;2.09e-08;1!UBERON:0001171;2.09e-08;1!UBERON:0001172;2.09e-08;1!UBERON:0001987;3.90e-08;4!UBERON:0005631;9.44e-07;10!UBERON:0000158;9.44e-07;10!UBERON:0002331;9.82e-07;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,1.67e-17,24;UBERON:0005631,1.90e-12,14;UBERON:0000158,1.90e-12,14;UBERON:0000305,1.62e-09,7;UBERON:0001282,1.88e-08,1;UBERON:0009842,1.88e-08,1;UBERON:0003704,1.88e-08,1;UBERON:0001171,1.88e-08,1;UBERON:0001172,1.88e-08,1;UBERON:0004871,2.20e-08,8;UBERON:0001987,3.84e-08,4;UBERON:0004340,3.84e-08,4;UBERON:0002331,9.63e-07,10;UBERON:0000358,9.63e-07,10;UBERON:0000307,9.63e-07,10;UBERON:0000091,9.63e-07,10;UBERON:0000087,9.63e-07,10;UBERON:0007010,9.63e-07,10;UBERON:0007806,9.63e-07,10;UBERON:0008780,9.63e-07,10;UBERON:0005728,9.63e-07,10 | |||
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|short_description=p@chr19:48045004..48045009,- | |short_description=p@chr19:48045004..48045009,- | ||
}} | }} |
Latest revision as of 15:33, 27 July 2015
Short description: | p@chr19:48045004..48045009, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:48045004..48045009, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 3.61e-15 | 2 |
placental epithelial cell | 1.41e-10 | 3 |
extraembryonic cell | 4.07e-09 | 19 |
CD34-positive, CD38-negative hematopoietic stem cell | 2.33e-08 | 1 |
innate effector T cell | 4.41e-08 | 1 |
immature NK T cell | 4.41e-08 | 1 |
effector T cell | 4.41e-08 | 1 |
mature NK T cell | 4.41e-08 | 1 |
immature NK T cell stage IV | 4.41e-08 | 1 |
immature NK T cell stage I | 4.41e-08 | 1 |
immature NK T cell stage II | 4.41e-08 | 1 |
immature NK T cell stage III | 4.41e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 1.67e-17 | 24 |
extraembryonic membrane | 1.90e-12 | 14 |
membranous layer | 1.90e-12 | 14 |
amnion | 1.62e-09 | 7 |
intralobular bile duct | 1.88e-08 | 1 |
acinus | 1.88e-08 | 1 |
intrahepatic bile duct | 1.88e-08 | 1 |
portal lobule | 1.88e-08 | 1 |
hepatic acinus | 1.88e-08 | 1 |
somatic layer of lateral plate mesoderm | 2.20e-08 | 8 |
placenta | 3.84e-08 | 4 |
allantois | 3.84e-08 | 4 |
umbilical cord | 9.63e-07 | 10 |
blastocyst | 9.63e-07 | 10 |
blastula | 9.63e-07 | 10 |
bilaminar disc | 9.63e-07 | 10 |
inner cell mass | 9.63e-07 | 10 |
cleaving embryo | 9.63e-07 | 10 |
connecting stalk | 9.63e-07 | 10 |
inner cell mass derived epiblast | 9.63e-07 | 10 |
extraembryonic mesoderm | 9.63e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 3.83e-08 | 1 |
cutaneous T cell lymphoma | 3.83e-08 | 1 |
mycosis fungoides | 3.83e-08 | 1 |