FFCP PHASE1:Hg19::chr1:1289264..1289283,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:1289264..1289283,- | |||
|coexpression_cluster_id=C1000 | |||
|description=CAGE_peak_at_chr1:1289264..1289283,- | |description=CAGE_peak_at_chr1:1289264..1289283,- | ||
|id=chr1:1289264..1289283,- | |id=chr1:1289264..1289283,- | ||
|ontology_enrichment_celltype=CL:0000055!2.66e-28!180;CL:0000057!2.35e-21!75;CL:0000680!6.24e-12!57;CL:0000056!6.24e-12!57;CL:0000355!6.24e-12!57;CL:0000183!1.62e-11!59;CL:0002334!3.15e-11!12;CL:0000187!1.03e-10!54;CL:0002620!8.43e-10!23;CL:0000048!9.35e-10!430;CL:0000723!4.60e-09!436;CL:0000034!5.27e-09!444;CL:0000192!8.04e-09!42;CL:0000514!8.04e-09!42;CL:0000393!1.59e-08!60;CL:0000211!1.59e-08!60;CL:0000136!5.68e-08!15;CL:0002371!1.03e-07!591;CL:0000359!2.86e-07!32 | |ontology_enrichment_celltype=CL:0000055!2.66e-28!180;CL:0000057!2.35e-21!75;CL:0000680!6.24e-12!57;CL:0000056!6.24e-12!57;CL:0000355!6.24e-12!57;CL:0000183!1.62e-11!59;CL:0002334!3.15e-11!12;CL:0000187!1.03e-10!54;CL:0002620!8.43e-10!23;CL:0000048!9.35e-10!430;CL:0000723!4.60e-09!436;CL:0000034!5.27e-09!444;CL:0000192!8.04e-09!42;CL:0000514!8.04e-09!42;CL:0000393!1.59e-08!60;CL:0000211!1.59e-08!60;CL:0000136!5.68e-08!15;CL:0002371!1.03e-07!591;CL:0000359!2.86e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0002334;3.10e-21;12!CL:0000136;2.05e-08;13!CL:0002615;2.29e-08;3!CL:0000135;3.76e-08;3!CL:0000388;3.76e-08;3!CL:0002579;4.68e-08;3!CL:0002580;7.86e-08;3!CL:0002620;2.04e-07;23!CL:0002564;2.96e-07;3!CL:0002559;5.36e-07;5!CL:0002570;9.76e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,2.20e-21,12;CL:0000057,2.20e-19,76;CL:0000136,2.98e-11,15;CL:0002320,3.21e-11,361;CL:0002615,2.52e-08,3;CL:0000135,3.59e-08,3;CL:0000388,3.59e-08,3;CL:0002579,3.94e-08,3;CL:0000048,5.14e-08,427;CL:0002580,6.40e-08,3;CL:0000134,1.10e-07,354;CL:0000723,1.11e-07,433;CL:0002620,2.64e-07,23;CL:0002559,2.78e-07,5;CL:0000034,2.95e-07,441;CL:0002564,5.58e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;5.26e-08;3!DOID:127;5.26e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.53e-08,3;DOID:127,4.53e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.59e-15!83;UBERON:0002329!2.59e-15!83;UBERON:0003077!2.59e-15!83;UBERON:0003059!2.59e-15!83;UBERON:0007282!2.59e-15!83;UBERON:0009618!2.59e-15!83;UBERON:0007285!2.59e-15!83;UBERON:0004290!1.55e-12!70;UBERON:0002385!1.63e-11!63;UBERON:0001015!1.63e-11!63;UBERON:0000383!1.63e-11!63;UBERON:0001134!4.66e-11!61;UBERON:0002036!4.66e-11!61;UBERON:0003082!4.66e-11!61;UBERON:0005256!2.76e-10!143;UBERON:0000486!3.14e-10!82;UBERON:0002100!1.81e-09!216;UBERON:0000475!8.99e-09!365;UBERON:0002199!2.16e-08!45;UBERON:0002416!2.16e-08!45;UBERON:0001013!4.13e-08!14;UBERON:0003102!5.05e-08!95;UBERON:0003688!2.43e-07!6;UBERON:0002358!2.43e-07!6;UBERON:0003684!2.43e-07!6;UBERON:0001178!2.43e-07!6;UBERON:0004923!9.03e-07!57;UBERON:0002097!9.37e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.49e-16;9!UBERON:0000042;3.49e-16;9!UBERON:0003688;9.67e-15;6!UBERON:0002358;9.67e-15;6!UBERON:0003684;9.67e-15;6!UBERON:0001178;9.67e-15;6!UBERON:0004905;1.06e-12;8!UBERON:0000982;1.06e-12;8!UBERON:0004770;1.06e-12;8!UBERON:0011135;5.59e-11;5!UBERON:0002216;5.59e-11;5!UBERON:0011134;5.59e-11;5!UBERON:0002209;5.59e-11;5!UBERON:0002213;5.59e-11;5!UBERON:0007844;5.59e-11;5!UBERON:0011138;5.59e-11;5!UBERON:0001130;5.59e-11;5!UBERON:0001066;5.59e-11;5!UBERON:0001468;5.59e-11;5!UBERON:0001013;7.21e-09;14!UBERON:0007846;3.76e-08;3!UBERON:0000043;3.76e-08;3!UBERON:0007845;3.76e-08;3!UBERON:0000075;1.37e-07;16!UBERON:0002242;2.96e-07;3!UBERON:0002073;5.36e-07;5!UBERON:0002384;5.84e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,8.94e-15,6;UBERON:0002358,8.94e-15,6;UBERON:0003684,8.94e-15,6;UBERON:0001178,8.94e-15,6;UBERON:0004905,1.28e-12,8;UBERON:0000982,1.28e-12,8;UBERON:0004770,1.28e-12,8;UBERON:0004457,7.65e-12,12;UBERON:0000042,7.65e-12,12;UBERON:0002384,4.14e-11,371;UBERON:0011135,1.01e-10,5;UBERON:0002216,1.01e-10,5;UBERON:0011134,1.01e-10,5;UBERON:0002209,1.01e-10,5;UBERON:0002213,1.01e-10,5;UBERON:0005856,1.01e-10,5;UBERON:0005866,1.01e-10,5;UBERON:0005863,1.01e-10,5;UBERON:0007844,1.01e-10,5;UBERON:0011138,1.01e-10,5;UBERON:0001130,1.01e-10,5;UBERON:0001066,1.01e-10,5;UBERON:0001468,1.01e-10,5;UBERON:0002199,1.94e-10,46;UBERON:0002416,1.94e-10,46;UBERON:0001013,7.78e-09,14;UBERON:0007846,3.59e-08,3;UBERON:0000043,3.59e-08,3;UBERON:0007845,3.59e-08,3;UBERON:0002097,4.24e-08,41;UBERON:0003102,1.02e-07,99;UBERON:0000075,2.52e-07,16;UBERON:0002073,2.78e-07,5;UBERON:0005086,2.78e-07,5;UBERON:0004923,3.24e-07,66;UBERON:0002242,5.58e-07,3;UBERON:0003068,5.58e-07,3;UBERON:0002328,5.58e-07,3;UBERON:0004880,5.58e-07,3 | |||
|phase1_expression=3.08853244759946,6.42301571672949,3.10099689011137,5.00366491765652,4.91657203870017,6.10636966870258,0,1.89515962028049,0.522371256399677,0.245733936501509,0.697801167972428,1.09220686065086,1.05506791291381,1.48519623552056,2.31978163009541,0.672325146451775,1.80808358407193,1.46062018077475,1.46379839637152,0.246242116153576,1.42800483870977,0.626909442956176,0.286235987131057,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0.670700859703636,0,1.0843174571537,0,2.75208386025565,0,0,0.189069634328136,0.443458794925128,0.702678285545008,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,1.39293562831038,0.264818361626438,1.72101972449288,0.354668382198357,0.560677600142307,0,0.49333509683432,0,0.269421344139376,0,0.151357427644931,0,0,0.624320153660641,0,0.597794722207204,0.587172493218824,0.161872944368132,0,0,0.737005903870608,0.929932030581889,1.18800285728205,3.70900393917835,0,0.718618141816238,0.168336113954066,1.00094815897571,0.277064115484183,0.438977620880838,2.45190236639216,0.901428353439581,0,0.538168907066586,0,1.05965950579781,1.20036438433761,0.515262646192195,2.31876486041066,1.11670113798954,1.85653965465393,2.53336213419116,0.504867548488229,0.644349290496095,1.93975268182574,2.84007674013291,2.01504196455281,1.01736355386293,0,0,0,0.121973706129595,0,0.116193942869518,0,0.252320850875628,0,1.56449532329816,1.92972281457866,0,2.78620756819187,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,7.15312891703765,0.845302752556,0,1.04007436911366,0.257207374262142,0,0.266422179016099,0,1.62786481617433,0,0,0.355391948742546,0,0.301439377059586,0,0.499864955910285,0,0,0,0.718874566474748,2.29723871668228,1.42636905040718,0.579125226670317,1.2328579353023,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,1.2269149171914,4.00136416847742,1.08506009479894,1.87173775377726,4.99601168632053,1.10391690523754,0.937131319941706,0.300946099727719,13.6444502433591,2.0694614258501,1.32845119707087,0.553107505625109,0.868836144680828,1.76221041716467,2.40200396667599,0,0,0,0.606255142892519,1.66435439510497,1.81434175997808,3.47350930946288,1.53461973288062,9.5424432107245,3.07533958213682,3.58195074346692,2.89537058058494,1.48418066444991,2.62156479464514,1.06537035187876,0.164254312027618,3.11552657510173,1.74315567689939,0,0,0,0.459257792658427,0.728364672026868,1.44236856455367,0,0,0,1.46139224653261,0,0,0,0.215915916102139,0,0.541892875087706,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0.48335359146061,0.154048617114644,0.15350367472613,0.413509717453592,0,0.870100163485371,0.0852266274161009,0.267096106940212,0,0,0,0,0,0.94443704049192,0.6970372701606,0.308033580176089,0,0.869932992075073,0.37064843820784,0.286249773483982,0.744316738719335,0,0.38126038784765,0.255897791311334,0.855877976067841,0.318203247925937,0,0.179872457583315,1.92175920815238,0.353437207037059,0,0,0.421258456238981,0,0.731140468893853,3.16950440270266,0.409499734223957,1.55545975149084,3.39024349860728,0,0.66343897524122,0.438450885253763,0,0,0.202910376962704,0,0.845086807596724,0.143411352204052,0.0982490410131212,0,0.709522128141196,1.68886108238131,2.63435914367922,0,1.04980416073495,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0.23874448473769,0,0.921482106297696,0,0.140669416410513,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269272933229316,0.108647371922008,0.31900115973192,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379119477770928,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0.85381197895741,0,0,0,0.171594997861965,0,0.372757606696298,0,0,0,0,0,0,0,0,0.859530882839914,0,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,2.71499800876856,2.5926644736038,5.87857248196936,0,0,0.511164065356265,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0.7520696820681,0,0.655745261419609,0,0,0,0,0,0,0.0620964029413835,0.415045904808692,0,0,0,0,0,0,0.895528817321244,1.16856654923612,2.21922344601045,0.378806010550178,0.251567901752575,1.77962244319307,0.915360273587694,0.907385542579434,1.5543720058278,0,0,0.449803112163605,0.155262956876259,1.24411862352257,0.53168342911599,0.521745061811734,0.150257608997218,0.761610424337591,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|short_description=p@chr1:1289264..1289283,- | |short_description=p@chr1:1289264..1289283,- | ||
}} | }} |
Latest revision as of 20:32, 27 July 2015
Short description: | p@chr1:1289264..1289283, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:1289264..1289283, - |
Coexpression cluster: | C1000_Osteoblast_Preadipocyte_Hair_Adipocyte_tenocyte_Mesenchymal_leiomyoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 2.20e-21 | 12 |
fibroblast | 2.20e-19 | 76 |
fat cell | 2.98e-11 | 15 |
connective tissue cell | 3.21e-11 | 361 |
adipocyte of omentum tissue | 2.52e-08 | 3 |
fibrocyte | 3.59e-08 | 3 |
tendon cell | 3.59e-08 | 3 |
omentum preadipocyte | 3.94e-08 | 3 |
multi fate stem cell | 5.14e-08 | 427 |
preadipocyte of the breast | 6.40e-08 | 3 |
mesenchymal cell | 1.10e-07 | 354 |
somatic stem cell | 1.11e-07 | 433 |
skin fibroblast | 2.64e-07 | 23 |
hair follicle cell | 2.78e-07 | 5 |
stem cell | 2.95e-07 | 441 |
nucleus pulposus cell of intervertebral disc | 5.58e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.53e-08 | 3 |
leiomyoma | 4.53e-08 | 3 |