FFCP PHASE1:Hg19::chr1:235393906..235393910,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:235393906..235393910,- to FFCP PHASE1:Hg19::chr1:235393906..235393910,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:235393906..235393910,- | |||
|coexpression_cluster_id=C474 | |||
|description=CAGE_peak_at_chr1:235393906..235393910,- | |||
|id=chr1:235393906..235393910,- | |||
|ontology_enrichment_celltype=CL:0000037!1.06e-10!172;CL:0000566!1.06e-10!172;CL:0000988!1.71e-10!182;CL:0000738!1.81e-09!140;CL:0002032!1.88e-09!165;CL:0000837!1.88e-09!165;CL:0002087!1.14e-07!119;CL:0002031!1.28e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000623;9.34e-20;3!CL:0000791;1.08e-16;18!CL:0000789;1.08e-16;18!CL:0002419;1.08e-16;18!CL:0000084;8.90e-12;25!CL:0000624;1.88e-10;6!CL:0002393;3.17e-10;6!CL:0002397;3.17e-10;6!CL:0000775;1.66e-09;3!CL:0000226;1.97e-09;3!CL:0000842;1.97e-09;3!CL:0000625;2.03e-09;11!CL:0000542;2.82e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,6.39e-20,3;CL:0000825,6.39e-20,3;CL:0000791,1.23e-16,18;CL:0000789,1.23e-16,18;CL:0002420,1.23e-16,18;CL:0002419,1.23e-16,18;CL:0000790,1.23e-16,18;CL:0000838,3.23e-15,52;CL:0000542,6.91e-15,53;CL:0000051,6.91e-15,53;CL:0000738,2.19e-14,136;CL:0000988,3.34e-14,177;CL:0002087,6.11e-14,115;CL:0000037,1.08e-13,168;CL:0000084,9.78e-12,25;CL:0000827,9.78e-12,25;CL:0002032,1.55e-11,161;CL:0000837,1.55e-11,161;CL:0000624,1.98e-10,6;CL:0002031,4.23e-10,120;CL:0000775,1.40e-09,3;CL:0000226,1.97e-09,3;CL:0000842,1.97e-09,3;CL:0000625,2.22e-09,11;CL:0002393,6.44e-07,9;CL:0002397,6.44e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000790;1.08e-16;18!CL:0000051;2.82e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001000;2.04e-07;1!UBERON:0002134;2.04e-07;1!UBERON:0005208;2.04e-07;1!UBERON:0004145;2.04e-07;1!UBERON:0005946;2.04e-07;1!UBERON:0005352;2.04e-07;1!UBERON:0005965;2.04e-07;1!UBERON:0002078;2.04e-07;1!UBERON:0000178;8.43e-07;15!UBERON:0000179;8.43e-07;15!UBERON:0000463;8.43e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,1.30e-07,1;UBERON:0005352,1.30e-07,1;UBERON:0002134,1.80e-07,1;UBERON:0005208,1.80e-07,1;UBERON:0005946,1.80e-07,1;UBERON:0005965,1.80e-07,1;UBERON:0002078,1.80e-07,1;UBERON:0000178,8.85e-07,15;UBERON:0000179,8.85e-07,15;UBERON:0000463,8.85e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.376627918784408,0.305653622991805,0.246301768349837,0.0787107813136792,0,0.383829398097213,0.619264493264304,0,0,0,0.309868802321207,0.853015394924529,0.293600439334847,2.21598163412751,2.20598892217156,2.82114131930607,0.671746422719773,0.32389366601898,0,0.145398238779565,0.377875943688809,0.727752183563449,0.232429036905685,0.411167888021826,0,0.28769239232215,0.512321413058201,0,0.344745680736619,0,0,0.376484679085209,0,0.674170453335254,1.53041946185451,0,0.639337125799041,0.329851300186716,0,0.426224750532694,0,0,0,0.502497330513487,0.521482918420201,0,0,0.736555271975129,0,0,0,0,0,0.150176892841506,0.16072558669708,0,0.39783335439818,0.182664153764634,0,0,0,0.853460445133014,0,0,0,0,1.1384259382189,1.17447437874188,0.764546456250458,0,0.560508562981536,0.263384084775077,2.360517241366,4.32311839024081,3.08402248499264,0,0.32592226663359,0,0,0.445641827540694,0.883817722424512,0,0.270803863765016,0.512365278902701,0.650296737799391,0,0.276350017785848,0,0.14828656316206,0.535081656179426,4.18142095219907,0.226618685395132,0,0.68725489096526,0.253019692019503,0,0,0,0,0,1.24930726552346,0.236777252044017,0,2.41928091869679,2.67440195783507,2.31719046212478,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0,0,0.417989933073621,0,0,0,0,0,0,0.367663080345869,0,0,0,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0,0.560677600142307,0,0,0,0,0.163461903113459,0.302714855289863,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0.0974370051611986,0,0.184099797284599,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0.330881918197182,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0.492434012174795,0,0,0,0,0,0.0895585227028483,0,0,0,0.176096868026452,0,0.288239906833923,0.37872730027914,0,0.381988425558278,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0.428933980974443,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0.448340575974109,2.95546140302891,1.2937654491571,3.20857590699371,0,0,0,0.167516265334349,0,1.49801404789436,8.97484377612075,0.414415513436035,0,0,0,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0,0,0,0.343143423810856,0.620304078368662,3.01999881146064,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0.182091168006717,0,0,0,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0,0,0,0.0852266274161009,0,0,0,0.510450849978337,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0.35667105148125,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.376575203107117,0,0,0,0,0,0.764637207142375,0.569647187174163,0,0,0.648473311192717,1.08006287447623,0,0.106824071127473,0,0.490080431962063,0,0.144269212976445,0.711418433484141,0.318852545457645,0.798317485731266,0.191505370132367,0.846694330895531,0,0,0.228234679033192,0,2.50634477090067,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0.66614393599564,0,0.18714054040822,0,0,0.111443384277478,0.284136146806413,0.47748896947538,0,0,0,0.281338832821026,0,0.329607748453519,0.211125408127993,0.597743964753209,0.552567831062295,0.251932747854276,0.20453736500431,0.615424027305347,0,0.0898683511473268,0.179021174675609,1.53471711068062,0.394573622547734,0,0,0,0.0927680981618513,0,0,0.524759999977174,0,0.1137934482855,0,0.472775363535873,0,0.291604613383254,0,0.885741385813839,0.60298219312704,0,0,0.295547618953547,0,0.10893846351899,0,0.538651809526579,0.113942055847001,0.23056390438806,0,0.651884231532048,0,0,0,0,0.470940769185074,0.664846727600626,0.225595660617181,0,0.335643173951685,0.75901493089674,0,0.421996129056054,0,0.141353071433941,0,0.995261931078505,0.442287822516696,2.4441205797345,1.48260564340311,0.123563938946503,0.626531697032732,0,0.802577647298789,0.234264445725339,0.182454789215666,0,0.485560759068186,1.57833761139756,0,0.30607276163049,0.379119477770928,0.300646838828985,0.103688191397247,0,0,0,0,0.569219092059585,0,0,0,0.34823682632161,0.17472666824203,0,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0.176512253383001,0,0,0,0.126621591911757,0.195551382734803,0,0,0,0,0,0.514784993585894,0,0.124252535565433,0,0,0.209205692624666,0.203996435272644,0,0,0.273810757783986,0,0,0,0,0,1.43574604915363,0,0,0.223171457441873,0.134366944973453,0,1.16495949527454,0,0,0.26961417541674,0,0.169346664131569,0,0.544813624446302,0.160753148465019,0,0,0.67492167465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| ||
|short_description=p@chr1:235393906..235393910,- | |||
}} | }} |
Latest revision as of 05:19, 28 July 2015
Short description: | p@chr1:235393906..235393910, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:235393906..235393910, - |
Coexpression cluster: | C474_Neutrophils_CD4_CD8_Natural_CD14_Peripheral_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 6.39e-20 | 3 |
pro-NK cell | 6.39e-20 | 3 |
mature alpha-beta T cell | 1.23e-16 | 18 |
alpha-beta T cell | 1.23e-16 | 18 |
immature T cell | 1.23e-16 | 18 |
mature T cell | 1.23e-16 | 18 |
immature alpha-beta T cell | 1.23e-16 | 18 |
lymphoid lineage restricted progenitor cell | 3.23e-15 | 52 |
lymphocyte | 6.91e-15 | 53 |
common lymphoid progenitor | 6.91e-15 | 53 |
leukocyte | 2.19e-14 | 136 |
hematopoietic cell | 3.34e-14 | 177 |
nongranular leukocyte | 6.11e-14 | 115 |
hematopoietic stem cell | 1.08e-13 | 168 |
T cell | 9.78e-12 | 25 |
pro-T cell | 9.78e-12 | 25 |
hematopoietic oligopotent progenitor cell | 1.55e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.55e-11 | 161 |
CD4-positive, alpha-beta T cell | 1.98e-10 | 6 |
hematopoietic lineage restricted progenitor cell | 4.23e-10 | 120 |
neutrophil | 1.40e-09 | 3 |
single nucleate cell | 1.97e-09 | 3 |
mononuclear cell | 1.97e-09 | 3 |
CD8-positive, alpha-beta T cell | 2.22e-09 | 11 |
intermediate monocyte | 6.44e-07 | 9 |
CD14-positive, CD16-positive monocyte | 6.44e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
vas deferens | 1.30e-07 | 1 |
spermatic cord | 1.30e-07 | 1 |
tricuspid valve | 1.80e-07 | 1 |
right atrium valve | 1.80e-07 | 1 |
outflow tract of atrium | 1.80e-07 | 1 |
outflow part of right atrium | 1.80e-07 | 1 |
right cardiac atrium | 1.80e-07 | 1 |
blood | 8.85e-07 | 15 |
haemolymphatic fluid | 8.85e-07 | 15 |
organism substance | 8.85e-07 | 15 |