FFCP PHASE1:Hg19::chr1:26607679..26607701,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:26607679..26607701,+ | |||
|coexpression_cluster_id=C853 | |||
|description=CAGE_peak_at_chr1:26607679..26607701,+ | |||
|id=chr1:26607679..26607701,+ | |||
|ontology_enrichment_celltype=CL:0000723!2.67e-22!436;CL:0000048!3.04e-22!430;CL:0002371!2.33e-20!591;CL:0000034!4.70e-20!444;CL:0000144!4.24e-18!625;CL:0002057!6.66e-17!42;CL:0000766!1.78e-16!76;CL:0000839!5.59e-14!70;CL:0000860!7.15e-14!45;CL:0002320!1.06e-13!365;CL:0000557!2.92e-13!71;CL:0000134!3.01e-13!358;CL:0002194!1.60e-12!63;CL:0000576!1.60e-12!63;CL:0000040!1.60e-12!63;CL:0000559!1.60e-12!63;CL:0002009!4.54e-12!65;CL:0000548!1.37e-10!679;CL:0000004!1.37e-10!679;CL:0000255!1.37e-10!679;CL:0000003!3.40e-10!722;CL:0000012!1.03e-09!682;CL:0000219!2.26e-09!390;CL:0000763!8.76e-08!112;CL:0000049!8.76e-08!112;CL:0000055!1.77e-07!180;CL:0000222!3.00e-07!119;CL:0000192!3.28e-07!42;CL:0000514!3.28e-07!42;CL:0000359!4.59e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.68e-16;33!CL:0002057;9.68e-16;33!CL:0000473;1.29e-14;39!CL:0000234;1.29e-14;39!CL:0000576;7.49e-10;48!CL:0000766;8.05e-10;69!CL:0000359;4.27e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,5.92e-24,433;CL:0000048,7.01e-24,427;CL:0000034,1.46e-21,441;CL:0000766,6.09e-20,72;CL:0000473,1.65e-19,48;CL:0000234,1.65e-19,48;CL:0000860,1.14e-17,42;CL:0002057,1.14e-17,42;CL:0000839,3.62e-17,66;CL:0000557,9.48e-17,67;CL:0002194,7.40e-16,59;CL:0000576,7.40e-16,59;CL:0000040,7.40e-16,59;CL:0000559,7.40e-16,59;CL:0002009,2.96e-15,61;CL:0002320,5.33e-15,361;CL:0000134,1.53e-14,354;CL:0000219,1.92e-10,386;CL:0000763,1.08e-09,108;CL:0000049,1.08e-09,108;CL:0000222,8.73e-08,121;CL:0000359,2.43e-07,32;CL:0000192,9.23e-07,43;CL:0000514,9.23e-07,43 | |||
|ontology_enrichment_development_v019=CL:0002057;3.63e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.46e-17!167;UBERON:0003081!1.36e-14!216;UBERON:0002384!2.82e-13!375;UBERON:0002371!3.50e-13!80;UBERON:0004765!5.04e-12!101;UBERON:0001434!5.04e-12!101;UBERON:0001474!4.31e-11!86;UBERON:0002193!8.84e-11!112;UBERON:0002390!2.62e-10!102;UBERON:0003061!2.62e-10!102;UBERON:0001637!9.30e-09!42;UBERON:0003509!9.30e-09!42;UBERON:0004572!9.30e-09!42;UBERON:0002405!2.68e-08!115;UBERON:0000914!9.94e-08!83;UBERON:0002329!9.94e-08!83;UBERON:0003077!9.94e-08!83;UBERON:0003059!9.94e-08!83;UBERON:0007282!9.94e-08!83;UBERON:0009618!9.94e-08!83;UBERON:0007285!9.94e-08!83;UBERON:0000486!1.99e-07!82;UBERON:0004573!3.22e-07!33;UBERON:0004571!3.22e-07!33;UBERON:0004290!5.87e-07!70 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,7.47e-20,167;UBERON:0000926,2.98e-19,315;UBERON:0004120,2.98e-19,315;UBERON:0006603,2.98e-19,315;UBERON:0003081,6.84e-19,203;UBERON:0002371,1.71e-16,76;UBERON:0004765,8.88e-15,90;UBERON:0002384,1.45e-14,371;UBERON:0002405,2.89e-14,93;UBERON:0001434,3.22e-14,100;UBERON:0001474,6.60e-14,82;UBERON:0002193,5.65e-13,108;UBERON:0002390,1.61e-12,98;UBERON:0003061,1.61e-12,98;UBERON:0001637,5.69e-09,42;UBERON:0003509,5.69e-09,42;UBERON:0004572,5.69e-09,42;UBERON:0000486,6.49e-08,83;UBERON:0007503,1.25e-07,78;UBERON:0004573,2.35e-07,33;UBERON:0004571,2.35e-07,33;UBERON:0002329,2.79e-07,71;UBERON:0003059,2.79e-07,71;UBERON:0007282,2.79e-07,71;UBERON:0004290,2.79e-07,71;UBERON:0009618,2.79e-07,71;UBERON:0004872,3.64e-07,83;UBERON:0000055,4.76e-07,68;UBERON:0007524,4.78e-07,73;UBERON:0007500,5.24e-07,59;UBERON:0001981,5.24e-07,59;UBERON:0004537,5.24e-07,59;UBERON:0006965,5.24e-07,59;UBERON:0003077,6.67e-07,72;UBERON:0007285,6.67e-07,72 | |||
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| |||
|short_description=p@chr1:26607679..26607701,+ | |||
}} |
Latest revision as of 06:35, 28 July 2015
Short description: | p@chr1:26607679..26607701, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:26607679..26607701, + |
Coexpression cluster: | C853_Neutrophils_leiomyoma_Smooth_Monocytederived_CD14_Osteoblast_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 5.92e-24 | 433 |
multi fate stem cell | 7.01e-24 | 427 |
stem cell | 1.46e-21 | 441 |
myeloid leukocyte | 6.09e-20 | 72 |
defensive cell | 1.65e-19 | 48 |
phagocyte | 1.65e-19 | 48 |
classical monocyte | 1.14e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.14e-17 | 42 |
myeloid lineage restricted progenitor cell | 3.62e-17 | 66 |
granulocyte monocyte progenitor cell | 9.48e-17 | 67 |
monopoietic cell | 7.40e-16 | 59 |
monocyte | 7.40e-16 | 59 |
monoblast | 7.40e-16 | 59 |
promonocyte | 7.40e-16 | 59 |
macrophage dendritic cell progenitor | 2.96e-15 | 61 |
connective tissue cell | 5.33e-15 | 361 |
mesenchymal cell | 1.53e-14 | 354 |
motile cell | 1.92e-10 | 386 |
myeloid cell | 1.08e-09 | 108 |
common myeloid progenitor | 1.08e-09 | 108 |
mesodermal cell | 8.73e-08 | 121 |
vascular associated smooth muscle cell | 2.43e-07 | 32 |
smooth muscle cell | 9.23e-07 | 43 |
smooth muscle myoblast | 9.23e-07 | 43 |