FFCP PHASE1:Hg19::chr20:20350223..20350235,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:20350223..20350235,- | |||
|coexpression_cluster_id=C1478 | |||
|description=CAGE_peak_at_chr20:20350223..20350235,- | |description=CAGE_peak_at_chr20:20350223..20350235,- | ||
|id=chr20:20350223..20350235,- | |id=chr20:20350223..20350235,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.60e-67;3 | |||
|ontology_enrichment_disease=DOID:3119!2.60e-07!14;DOID:5409!5.70e-07!4 | |ontology_enrichment_disease=DOID:3119!2.60e-07!14;DOID:5409!5.70e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:3119;8.07e-15;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,7.69e-15,14 | |||
|ontology_enrichment_uberon=UBERON:0001017!5.80e-32!82;UBERON:0001049!7.82e-31!57;UBERON:0005068!7.82e-31!57;UBERON:0006241!7.82e-31!57;UBERON:0007135!7.82e-31!57;UBERON:0005743!4.50e-30!86;UBERON:0000073!6.08e-30!94;UBERON:0001016!6.08e-30!94;UBERON:0002616!3.85e-27!59;UBERON:0002780!1.80e-26!41;UBERON:0001890!1.80e-26!41;UBERON:0006240!1.80e-26!41;UBERON:0003080!1.03e-25!42;UBERON:0000955!1.60e-25!69;UBERON:0006238!1.60e-25!69;UBERON:0003075!4.14e-21!86;UBERON:0007284!4.14e-21!86;UBERON:0002020!1.18e-20!34;UBERON:0003528!1.18e-20!34;UBERON:0002346!7.92e-20!90;UBERON:0001869!1.15e-19!32;UBERON:0002791!5.86e-19!33;UBERON:0001893!2.71e-18!34;UBERON:0003056!4.95e-16!61;UBERON:0000956!1.22e-14!25;UBERON:0000203!1.22e-14!25;UBERON:0000153!1.96e-13!129;UBERON:0007811!1.96e-13!129;UBERON:0000033!2.06e-13!123;UBERON:0001950!3.06e-13!20;UBERON:0003296!8.27e-13!4;UBERON:0010133!8.27e-13!4;UBERON:0004121!1.09e-12!169;UBERON:0000924!3.41e-12!173;UBERON:0006601!3.41e-12!173;UBERON:0002619!6.92e-12!22;UBERON:0007023!1.17e-11!115;UBERON:0001894!8.84e-11!7;UBERON:0006222!8.84e-11!7;UBERON:0002771!5.13e-09!3;UBERON:0001871!2.07e-08!7;UBERON:0002420!1.35e-07!9;UBERON:0007245!1.35e-07!9;UBERON:0010009!1.35e-07!9;UBERON:0010011!1.35e-07!9;UBERON:0000454!1.35e-07!9;UBERON:0002308!1.50e-07!9;UBERON:0000125!1.50e-07!9;UBERON:0000200!1.60e-07!6;UBERON:0000007!1.99e-07!2;UBERON:0000025!2.95e-07!194;UBERON:0000369!4.63e-07!4;UBERON:0002435!4.63e-07!4;UBERON:0000204!4.63e-07!4;UBERON:0010082!4.63e-07!4;UBERON:0001905!4.75e-07!2;UBERON:0002757!4.75e-07!2;UBERON:0010134!4.75e-07!2;UBERON:0002784!4.75e-07!2;UBERON:0005408!4.75e-07!2;UBERON:0001899!4.75e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;2.39e-44;2!UBERON:0002037;5.68e-34;6!UBERON:0002680;6.22e-23;9!UBERON:0001895;6.22e-23;9!UBERON:0003296;8.96e-23;4!UBERON:0010133;8.96e-23;4!UBERON:0004733;2.14e-17;12!UBERON:0002028;2.14e-17;12!UBERON:0004732;4.09e-16;13!UBERON:0001894;1.80e-13;7!UBERON:0000073;1.22e-08;53!UBERON:0002616;1.22e-08;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.39e-44,2;UBERON:0002037,6.01e-34,6;UBERON:0006215,6.01e-34,6;UBERON:0002680,6.45e-23,9;UBERON:0001895,6.45e-23,9;UBERON:0010092,6.45e-23,9;UBERON:0003296,8.96e-23,4;UBERON:0010133,8.96e-23,4;UBERON:0004733,2.20e-17,12;UBERON:0002028,2.20e-17,12;UBERON:0007277,2.20e-17,12;UBERON:0004732,4.20e-16,13;UBERON:0003076,4.72e-14,15;UBERON:0003057,4.72e-14,15;UBERON:0001894,1.80e-13,7;UBERON:0006222,1.80e-13,7;UBERON:0000073,2.00e-10,53;UBERON:0002616,2.00e-10,53;UBERON:0001049,6.95e-10,56;UBERON:0005068,6.95e-10,56;UBERON:0006241,6.95e-10,56;UBERON:0007135,6.95e-10,56;UBERON:0000955,4.52e-08,68;UBERON:0006238,4.52e-08,68;UBERON:0001017,8.08e-07,81;UBERON:0003075,8.08e-07,82;UBERON:0007284,8.08e-07,82 | |||
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| ||
|short_description=p@chr20:20350223..20350235,- | |short_description=p@chr20:20350223..20350235,- | ||
}} | }} |
Latest revision as of 12:20, 28 July 2015
Short description: | p@chr20:20350223..20350235, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:20350223..20350235, - |
Coexpression cluster: | C1478_nonsmall_smallcell_small_pineal_cerebellum_argyrophil_gastrointestinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 2.39e-44 | 2 |
cerebellum | 6.01e-34 | 6 |
rhombic lip | 6.01e-34 | 6 |
regional part of metencephalon | 6.45e-23 | 9 |
metencephalon | 6.45e-23 | 9 |
future metencephalon | 6.45e-23 | 9 |
gland of diencephalon | 8.96e-23 | 4 |
neuroendocrine gland | 8.96e-23 | 4 |
segmental subdivision of hindbrain | 2.20e-17 | 12 |
hindbrain | 2.20e-17 | 12 |
presumptive hindbrain | 2.20e-17 | 12 |
segmental subdivision of nervous system | 4.20e-16 | 13 |
posterior neural tube | 4.72e-14 | 15 |
chordal neural plate | 4.72e-14 | 15 |
diencephalon | 1.80e-13 | 7 |
future diencephalon | 1.80e-13 | 7 |
regional part of nervous system | 2.00e-10 | 53 |
regional part of brain | 2.00e-10 | 53 |
neural tube | 6.95e-10 | 56 |
neural rod | 6.95e-10 | 56 |
future spinal cord | 6.95e-10 | 56 |
neural keel | 6.95e-10 | 56 |
brain | 4.52e-08 | 68 |
future brain | 4.52e-08 | 68 |
central nervous system | 8.08e-07 | 81 |
neural plate | 8.08e-07 | 82 |
presumptive neural plate | 8.08e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 7.69e-15 | 14 |