FFCP PHASE1:Hg19::chr20:5590556..5590620,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:5590556..5590620,-
|short_description=p@chr20:5590556..5590620,-
|description=CAGE_peak_at_chr20:5590556..5590620,-
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:5590556..5590620,- | |||
|coexpression_cluster_id=C407 | |||
|description=CAGE_peak_at_chr20:5590556..5590620,- | |||
|id=chr20:5590556..5590620,- | |||
|ontology_enrichment_celltype=CL:0000738!1.95e-37!140;CL:0002057!3.37e-36!42;CL:0002087!5.79e-33!119;CL:0000860!2.35e-32!45;CL:0002031!3.11e-32!124;CL:0000037!1.41e-30!172;CL:0000566!1.41e-30!172;CL:0000988!4.76e-29!182;CL:0002032!1.02e-28!165;CL:0000837!1.02e-28!165;CL:0000766!4.46e-26!76;CL:0000839!8.76e-22!70;CL:0002194!4.60e-21!63;CL:0000576!4.60e-21!63;CL:0000040!4.60e-21!63;CL:0000559!4.60e-21!63;CL:0002009!1.04e-20!65;CL:0000557!1.68e-19!71;CL:0000763!8.39e-18!112;CL:0000049!8.39e-18!112;CL:0000838!9.15e-11!52;CL:0000542!2.50e-10!53;CL:0000051!2.50e-10!53;CL:0002393!4.10e-08!9;CL:0002397!4.10e-08!9;CL:0000094!6.97e-08!8;CL:0000945!5.43e-07!24;CL:0000826!5.43e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.55e-60;33!CL:0002057;4.55e-60;33!CL:0000473;7.85e-42;39!CL:0000234;7.85e-42;39!CL:0000576;1.09e-39;48!CL:0000766;1.77e-28;69!CL:0002087;2.56e-19;104!CL:0000094;7.06e-17;8!CL:0000738;2.71e-14;136!CL:0000081;7.63e-12;11!CL:0000763;1.27e-11;100!CL:0002393;1.20e-09;6!CL:0002397;1.20e-09;6!CL:0000988;5.24e-09;177!CL:0000624;7.10e-09;6!CL:0000775;1.70e-08;3!CL:0000226;4.31e-07;3!CL:0000842;4.31e-07;3!CL:0000623;7.80e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.99e-76,42;CL:0002057,5.99e-76,42;CL:0000473,6.80e-65,48;CL:0000234,6.80e-65,48;CL:0000738,1.28e-62,136;CL:0000766,1.07e-58,72;CL:0002087,9.45e-58,115;CL:0002031,9.03e-53,120;CL:0000037,7.97e-51,168;CL:0002194,1.93e-49,59;CL:0000576,1.93e-49,59;CL:0000040,1.93e-49,59;CL:0000559,1.93e-49,59;CL:0002032,1.79e-48,161;CL:0000837,1.79e-48,161;CL:0000839,3.78e-48,66;CL:0002009,1.88e-47,61;CL:0000988,2.69e-47,177;CL:0000557,3.46e-42,67;CL:0000763,2.62e-38,108;CL:0000049,2.62e-38,108;CL:0000094,5.03e-17,8;CL:0000134,6.40e-16,354;CL:0002320,2.94e-15,361;CL:0000219,6.17e-13,386;CL:0000081,6.01e-12,11;CL:0002393,2.90e-11,9;CL:0002397,2.90e-11,9;CL:0000048,3.93e-10,427;CL:0000838,8.44e-10,52;CL:0000723,9.49e-10,433;CL:0000542,1.58e-09,53;CL:0000051,1.58e-09,53;CL:0000034,2.95e-09,441;CL:0000624,8.05e-09,6;CL:0000775,1.64e-08,3;CL:0000226,5.82e-07,3;CL:0000842,5.82e-07,3;CL:0000623,7.34e-07,3;CL:0000825,7.34e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.32e-55;42!CL:0000049;3.39e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.98e-27!102;UBERON:0003061!9.98e-27!102;UBERON:0002193!1.65e-23!112;UBERON:0002371!1.30e-16!80;UBERON:0001474!4.39e-14!86;UBERON:0002405!5.23e-12!115;UBERON:0004765!7.81e-11!101;UBERON:0001434!7.81e-11!101;UBERON:0007023!1.25e-09!115;UBERON:0000178!2.28e-09!15;UBERON:0000179!2.28e-09!15;UBERON:0000463!2.28e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.27e-14;15!UBERON:0000179;2.27e-14;15!UBERON:0000463;2.27e-14;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.29e-48,98;UBERON:0003061,1.29e-48,98;UBERON:0002193,9.33e-43,108;UBERON:0002371,7.62e-36,76;UBERON:0001474,2.18e-32,82;UBERON:0002405,1.69e-30,93;UBERON:0004765,1.68e-28,90;UBERON:0001434,1.59e-24,100;UBERON:0003081,6.31e-17,203;UBERON:0002384,2.34e-14,371;UBERON:0000178,2.89e-14,15;UBERON:0000179,2.89e-14,15;UBERON:0000463,2.89e-14,15;UBERON:0002204,2.05e-10,167;UBERON:0000926,3.33e-07,315;UBERON:0004120,3.33e-07,315;UBERON:0006603,3.33e-07,315 | |||
|phase1_expression=0.181678379270557,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91033514369878,1.72411237844886,2.51874500203774,1.57345710739562,1.91914699048606,2.16742572642506,0,0,0,0.619737604642413,2.41687695228617,0.293600439334847,9.41792194504192,8.62341124121609,6.94434786290726,0,0,0,3.34415949192999,7.17964293008738,6.79235371325885,3.48643555358527,10.2791972005456,8.6717783850629,3.45230870786581,3.84241059793651,7.56743135643473,14.8240642716746,14.2006630388442,8.12558919566051,5.45902784673554,4.91231070104122,7.86532195557796,5.81559395504715,16.6883094079569,5.75403413219137,3.29851300186716,3.98927315243264,6.81959600852311,3.48251086354301,4.53908179752912,1.24564449799115,4.52247597462138,8.34372669472322,8.90474263290978,0.605399502633369,4.05105399586321,2.84816148696796,0.845021145247767,1.4882300997553,2.09658645508376,2.69588714751588,1.20141514273205,4.17886525412408,2.28010194992999,0.99458338599545,1.0959849225878,0,0.546138611262131,0.889509253863555,0.426730222566507,0.400395987036012,0,0,0.954053754535364,4.55370375287559,2.93618594685469,2.6759125968766,0,0,0.263384084775077,2.360517241366,4.32311839024081,4.31763147898969,0.501559486172034,1.62961133316795,0.473447805734733,0,0.334231370655521,0.294605907474837,0.443067789167242,2.16643091012012,0.640456598628376,0.780356085359269,0.493313713811028,0.552700035571697,0,0.593146252648242,1.07016331235885,0,0.453237370790265,1.14966148080576,0.68725489096526,0.759059076058509,0.318565414324097,0,0,0,0.383959833463255,0,0.710331756132051,0,2.21767417547206,2.40696176205157,1.01377082717959,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0.649094787309367,0.696518949197069,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,2.37600571456411,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0.234004265139238,0,0,0.16798212819886,0,0.179117045405697,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0.112085143993527,2.36436912242313,1.50939302401662,2.43851768931522,0,0,0,0,0,11.2351053592077,20.9413021442817,7.87389475528467,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,2.06768026122887,4.09856981555372,1.38745825144478,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,0,1.10497186723076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.28889814968902,3.39866086332371,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,1.01489521846434,3.0585488285695,1.70894156152249,1.90585420366231,1.64544909234478,1.29694662238543,2.16012574895246,2.37937552888281,0,0,0,0,0,0,0,0.199579371432817,0,0,0.324621940274555,0,0,0,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0.994147647766298,0,0,0,0,0.398495976502139,0.552567831062295,0,0,0.861593638227486,0,0,0.179021174675609,0,0.197286811273867,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0.173624994933292,0.885741385813839,0.120596438625408,0,0.774054819518572,0.591095237907095,0,0,0.278847488557207,0.230850775511391,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0.167821586975843,0.189753732724185,0,0.421996129056054,0.163232808159148,0,0,0,0.265372693510018,2.4441205797345,0.593042257361244,0.247127877893006,0.626531697032732,0.269604531922708,0,0.468528891450678,0.182454789215666,0.391329237864179,0,0,0,0.30607276163049,0.31593289814244,0.150323419414493,0,0,0,0,0,0,0,0,0.195984794828755,0,0.17472666824203,0,0,0,0,0.387956065953678,0,0.225980740780532,0,0,0.569797163602908,0.391102765469606,0,0.213452994739353,0,0,0,0,0.14405479798815,0.124252535565433,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0,0,0,0,1.43574604915363,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0.0846733320657845,0,0,0,0.137539436597234,0,0.2249738915515,0,0.607495566580247,0,0.0788057072991982,0,0,0,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0,0.170388021785422,0.226624183040251,0,0,0.129282956361551,0.13223260174269,0.684347351537318,0.704815022316672,0.640724475406168,0,1.24271716604159,0,0.395223263795889,2.9230223611415,0,0,0.2506898940227,0,0.327872630709804,2.51286554000375,0,0.122026264901963,0.500763722825999,0,0,0.310482014706917,0,0,0.151649117541648,0.285465333544967,0,0,0,0.149254802886874,0.233713309847224,0,0,0.251567901752575,0,0,0.302461847526478,0,0,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| ||
|short_description=p@chr20:5590556..5590620,- | |||
}} | }} |
Latest revision as of 15:41, 28 July 2015
Short description: | p@chr20:5590556..5590620, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:5590556..5590620, - |
Coexpression cluster: | C407_Neutrophils_CD14_Eosinophils_Peripheral_CD19_CD4_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.29e-48 | 98 |
blood island | 1.29e-48 | 98 |
hemolymphoid system | 9.33e-43 | 108 |
bone marrow | 7.62e-36 | 76 |
bone element | 2.18e-32 | 82 |
immune system | 1.69e-30 | 93 |
skeletal element | 1.68e-28 | 90 |
skeletal system | 1.59e-24 | 100 |
lateral plate mesoderm | 6.31e-17 | 203 |
connective tissue | 2.34e-14 | 371 |
blood | 2.89e-14 | 15 |
haemolymphatic fluid | 2.89e-14 | 15 |
organism substance | 2.89e-14 | 15 |
musculoskeletal system | 2.05e-10 | 167 |
mesoderm | 3.33e-07 | 315 |
mesoderm-derived structure | 3.33e-07 | 315 |
presumptive mesoderm | 3.33e-07 | 315 |