FFCP PHASE1:Hg19::chr21:43981989..43982000,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:43981989..43982000,+ | |||
|coexpression_cluster_id=C110 | |||
|description=CAGE_peak_at_chr21:43981989..43982000,+ | |||
|id=chr21:43981989..43982000,+ | |||
|ontology_enrichment_celltype=CL:0002127!1.82e-13!1;CL:0000914!1.82e-13!1;CL:0000911!1.82e-13!1;CL:0000814!1.82e-13!1;CL:0002042!1.82e-13!1;CL:0002039!1.82e-13!1;CL:0002040!1.82e-13!1;CL:0002041!1.82e-13!1;CL:0000893!2.28e-07!2;CL:0002489!2.28e-07!2;CL:0000809!2.28e-07!2;CL:0000808!2.28e-07!2;CL:0000894!2.28e-07!2;CL:0000806!2.28e-07!2;CL:0000807!2.28e-07!2;CL:0000805!2.28e-07!2;CL:0002425!2.28e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002127;2.55e-98;1!CL:0000911;2.55e-98;1!CL:0000814;2.55e-98;1!CL:0000791;7.60e-07;18!CL:0000789;7.60e-07;18!CL:0002419;7.60e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,2.55e-98,1;CL:0000914,2.55e-98,1;CL:0000911,2.55e-98,1;CL:0000814,2.55e-98,1;CL:0002042,2.55e-98,1;CL:0002039,2.55e-98,1;CL:0002040,2.55e-98,1;CL:0002041,2.55e-98,1;CL:0000893,4.52e-50,2;CL:0002489,4.52e-50,2;CL:0000809,4.52e-50,2;CL:0000808,4.52e-50,2;CL:0000894,4.52e-50,2;CL:0000806,4.52e-50,2;CL:0000807,4.52e-50,2;CL:0000805,4.52e-50,2;CL:0002425,4.52e-50,2;CL:0000791,7.60e-07,18;CL:0000789,7.60e-07,18;CL:0002420,7.60e-07,18;CL:0002419,7.60e-07,18;CL:0000790,7.60e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002425;4.52e-50;2!CL:0000790;7.60e-07;18 | |||
|ontology_enrichment_disease=DOID:4960!5.38e-13!1;DOID:0070004!5.38e-13!1;DOID:0050619!6.82e-13!1;DOID:1357!6.82e-13!1;DOID:2531!5.68e-08!51;DOID:0060083!5.68e-08!51;DOID:0050686!3.05e-07!137;DOID:1036!7.01e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;9.39e-14;8!DOID:1240;8.24e-08;39!DOID:2531;1.48e-07;51!DOID:0060083;1.48e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,9.39e-14,8;DOID:1240,2.03e-11,39;DOID:2531,4.95e-09,51;DOID:0060083,4.95e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0001764!6.82e-13!1;UBERON:0001825!6.82e-13!1;UBERON:0004177!1.13e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.14e-26,4;UBERON:0005058,7.14e-26,4;UBERON:0009113,7.14e-26,4;UBERON:0003295,7.14e-26,4;UBERON:0005562,7.14e-26,4;UBERON:0003351,9.07e-18,6;UBERON:0004177,1.91e-15,7;UBERON:0005057,1.91e-15,7;UBERON:0000974,3.02e-11,10;UBERON:0003408,3.02e-11,10;UBERON:0001042,3.02e-11,10;UBERON:0009145,3.02e-11,10;UBERON:0006562,2.37e-10,11;UBERON:0009722,2.37e-10,11;UBERON:0007690,2.37e-10,11;UBERON:0008814,7.60e-07,18 | |||
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|short_description=p@chr21:43981989..43982000,+ | |||
}} | }} |
Latest revision as of 18:11, 28 July 2015
Short description: | p@chr21:43981989..43982000, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:43981989..43982000, + |
Coexpression cluster: | C110_leukemia_chronic_Eosinophils_acute_Whole_CD34_Lymphatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 2.55e-98 | 1 |
immature NK T cell | 2.55e-98 | 1 |
effector T cell | 2.55e-98 | 1 |
mature NK T cell | 2.55e-98 | 1 |
immature NK T cell stage IV | 2.55e-98 | 1 |
immature NK T cell stage I | 2.55e-98 | 1 |
immature NK T cell stage II | 2.55e-98 | 1 |
immature NK T cell stage III | 2.55e-98 | 1 |
thymocyte | 4.52e-50 | 2 |
double negative thymocyte | 4.52e-50 | 2 |
double-positive, alpha-beta thymocyte | 4.52e-50 | 2 |
DN4 thymocyte | 4.52e-50 | 2 |
DN1 thymic pro-T cell | 4.52e-50 | 2 |
DN2 thymocyte | 4.52e-50 | 2 |
DN3 thymocyte | 4.52e-50 | 2 |
immature single positive thymocyte | 4.52e-50 | 2 |
early T lineage precursor | 4.52e-50 | 2 |
mature alpha-beta T cell | 7.60e-07 | 18 |
alpha-beta T cell | 7.60e-07 | 18 |
immature T cell | 7.60e-07 | 18 |
mature T cell | 7.60e-07 | 18 |
immature alpha-beta T cell | 7.60e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
thymus | 7.14e-26 | 4 |
hemolymphoid system gland | 7.14e-26 | 4 |
thymic region | 7.14e-26 | 4 |
pharyngeal gland | 7.14e-26 | 4 |
thymus primordium | 7.14e-26 | 4 |
pharyngeal epithelium | 9.07e-18 | 6 |
hemopoietic organ | 1.91e-15 | 7 |
immune organ | 1.91e-15 | 7 |
neck | 3.02e-11 | 10 |
gland of gut | 3.02e-11 | 10 |
chordate pharynx | 3.02e-11 | 10 |
pharyngeal region of foregut | 3.02e-11 | 10 |
pharynx | 2.37e-10 | 11 |
entire pharyngeal arch endoderm | 2.37e-10 | 11 |
early pharyngeal endoderm | 2.37e-10 | 11 |
pharyngeal arch system | 7.60e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 9.39e-14 | 8 |
leukemia | 2.03e-11 | 39 |
hematologic cancer | 4.95e-09 | 51 |
immune system cancer | 4.95e-09 | 51 |