FFCP PHASE1:Hg19::chr21:44957855..44957891,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:44957855..44957891,- | |||
|coexpression_cluster_id=C592 | |coexpression_cluster_id=C592 | ||
|description=CAGE_peak_at_chr21:44957855..44957891,- | |description=CAGE_peak_at_chr21:44957855..44957891,- | ||
|id=chr21:44957855..44957891,- | |id=chr21:44957855..44957891,- | ||
|ontology_enrichment_celltype=CL:0002159!3.04e-34!13;CL:0002076!2.17e-30!43;CL:0002368!8.54e-22!13;CL:0000223!5.53e-21!59;CL:0000066!2.59e-19!254;CL:0002621!2.82e-15!3;CL:0002166!4.11e-15!3;CL:0002077!6.54e-15!33;CL:0000362!1.37e-14!8;CL:0002328!3.11e-14!3;CL:0002251!6.76e-13!21;CL:0002321!1.29e-12!248;CL:0000240!1.46e-12!6;CL:0000311!1.46e-12!6;CL:0000079!1.46e-12!6;CL:0000237!1.46e-12!6;CL:0000036!1.46e-12!6;CL:0000357!1.46e-12!6;CL:0000114!1.46e-12!6;CL:0000220!8.98e-12!246;CL:0000317!1.05e-10!2;CL:1000448!1.05e-10!2;CL:0002308!1.05e-10!2;CL:0002140!1.05e-10!2;CL:0002327!1.23e-10!4;CL:0000575!5.55e-10!2;CL:0000076!1.44e-09!62;CL:0000622!5.56e-09!5;CL:0000312!6.53e-09!5;CL:0002202!2.60e-08!9;CL:0002632!2.60e-08!9;CL:0000221!6.61e-08!71;CL:0000154!1.50e-07!6 | |ontology_enrichment_celltype=CL:0002159!3.04e-34!13;CL:0002076!2.17e-30!43;CL:0002368!8.54e-22!13;CL:0000223!5.53e-21!59;CL:0000066!2.59e-19!254;CL:0002621!2.82e-15!3;CL:0002166!4.11e-15!3;CL:0002077!6.54e-15!33;CL:0000362!1.37e-14!8;CL:0002328!3.11e-14!3;CL:0002251!6.76e-13!21;CL:0002321!1.29e-12!248;CL:0000240!1.46e-12!6;CL:0000311!1.46e-12!6;CL:0000079!1.46e-12!6;CL:0000237!1.46e-12!6;CL:0000036!1.46e-12!6;CL:0000357!1.46e-12!6;CL:0000114!1.46e-12!6;CL:0000220!8.98e-12!246;CL:0000317!1.05e-10!2;CL:1000448!1.05e-10!2;CL:0002308!1.05e-10!2;CL:0002140!1.05e-10!2;CL:0002327!1.23e-10!4;CL:0000575!5.55e-10!2;CL:0000076!1.44e-09!62;CL:0000622!5.56e-09!5;CL:0000312!6.53e-09!5;CL:0002202!2.60e-08!9;CL:0002632!2.60e-08!9;CL:0000221!6.61e-08!71;CL:0000154!1.50e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002621;2.06e-43;3!CL:0002159;3.18e-36;14!CL:0000317;2.38e-29;2!CL:1000448;2.38e-29;2!CL:0002308;2.38e-29;2!CL:0002140;2.38e-29;2!CL:0000362;1.74e-25;9!CL:0002076;2.79e-21;42!CL:0002166;4.22e-20;3!CL:0002368;1.26e-17;13!CL:0002252;1.66e-15;1!CL:0002077;1.52e-13;34!CL:0000622;2.31e-12;5!CL:0000312;2.59e-12;5!CL:0002251;9.83e-12;20!CL:0000154;1.85e-10;6!CL:0000240;2.04e-10;6!CL:0000311;2.04e-10;6!CL:0000079;2.04e-10;6!CL:0000237;2.04e-10;6!CL:0000150;2.90e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,2.21e-43,3;CL:0002159,3.28e-36,14;CL:0000317,2.22e-29,2;CL:1000448,2.22e-29,2;CL:0002308,2.22e-29,2;CL:0002140,2.22e-29,2;CL:0000362,1.98e-25,9;CL:0002076,6.86e-21,42;CL:0002166,3.66e-20,3;CL:0002368,1.18e-17,13;CL:0002252,1.78e-15,1;CL:0000223,5.94e-15,58;CL:0002077,8.02e-15,34;CL:0000622,2.25e-12,5;CL:0000312,2.99e-12,5;CL:0002251,1.01e-11,20;CL:0000154,1.81e-10,6;CL:0000240,2.29e-10,6;CL:0000311,2.29e-10,6;CL:0000079,2.29e-10,6;CL:0000237,2.29e-10,6;CL:0000036,2.29e-10,6;CL:0000357,2.29e-10,6;CL:0000114,2.29e-10,6;CL:0002321,1.04e-09,250;CL:0000066,1.15e-09,253;CL:0000150,2.86e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000357;2.04e-10;6!CL:0000114;2.04e-10;6!CL:0000223;2.23e-09;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001949!2.82e-15!3;UBERON:0004815!3.11e-14!3;UBERON:0002031!3.11e-14!3;UBERON:0001708!1.89e-11!4;UBERON:0001704!1.89e-11!4;UBERON:0001004!5.05e-11!72;UBERON:0002185!8.51e-11!4;UBERON:0002419!1.05e-10!2;UBERON:0007771!1.05e-10!2;UBERON:0003297!1.05e-10!2;UBERON:0001821!1.05e-10!2;UBERON:0003487!1.05e-10!2;UBERON:0001820!1.05e-10!2;UBERON:0005089!1.05e-10!2;UBERON:0005088!1.05e-10!2;UBERON:0001911!1.23e-10!4;UBERON:0005333!1.23e-10!4;UBERON:0008425!1.23e-10!4;UBERON:0005311!1.23e-10!4;UBERON:0003102!5.69e-10!95;UBERON:0003729!1.24e-08!5;UBERON:0001003!3.34e-08!14;UBERON:0007376!3.34e-08!14;UBERON:0007383!3.34e-08!14;UBERON:0002090!9.15e-08!6;UBERON:0000166!2.38e-07!21;UBERON:0000165!3.69e-07!28;UBERON:0000930!3.69e-07!28;UBERON:0000161!4.98e-07!35;UBERON:0005157!7.66e-07!51;UBERON:0005085!8.27e-07!29 | |ontology_enrichment_uberon=UBERON:0001949!2.82e-15!3;UBERON:0004815!3.11e-14!3;UBERON:0002031!3.11e-14!3;UBERON:0001708!1.89e-11!4;UBERON:0001704!1.89e-11!4;UBERON:0001004!5.05e-11!72;UBERON:0002185!8.51e-11!4;UBERON:0002419!1.05e-10!2;UBERON:0007771!1.05e-10!2;UBERON:0003297!1.05e-10!2;UBERON:0001821!1.05e-10!2;UBERON:0003487!1.05e-10!2;UBERON:0001820!1.05e-10!2;UBERON:0005089!1.05e-10!2;UBERON:0005088!1.05e-10!2;UBERON:0001911!1.23e-10!4;UBERON:0005333!1.23e-10!4;UBERON:0008425!1.23e-10!4;UBERON:0005311!1.23e-10!4;UBERON:0003102!5.69e-10!95;UBERON:0003729!1.24e-08!5;UBERON:0001003!3.34e-08!14;UBERON:0007376!3.34e-08!14;UBERON:0007383!3.34e-08!14;UBERON:0002090!9.15e-08!6;UBERON:0000166!2.38e-07!21;UBERON:0000165!3.69e-07!28;UBERON:0000930!3.69e-07!28;UBERON:0000161!4.98e-07!35;UBERON:0005157!7.66e-07!51;UBERON:0005085!8.27e-07!29 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;2.06e-43;3!UBERON:0002419;2.38e-29;2!UBERON:0007771;2.38e-29;2!UBERON:0003297;2.38e-29;2!UBERON:0001821;2.38e-29;2!UBERON:0003487;2.38e-29;2!UBERON:0001820;2.38e-29;2!UBERON:0010371;3.67e-22;31!UBERON:0003929;4.78e-19;7!UBERON:0003350;9.44e-17;8!UBERON:0001828;9.44e-17;8!UBERON:0001003;1.91e-15;15!UBERON:0007376;1.91e-15;15!UBERON:0001708;2.47e-15;4!UBERON:0008895;2.47e-15;4!UBERON:0011159;1.84e-12;5!UBERON:0000486;2.24e-11;12!UBERON:0003729;1.52e-10;13!UBERON:0000161;2.20e-07;19!UBERON:0000166;2.20e-07;19!UBERON:0000344;4.86e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.21e-43,3;UBERON:0002419,2.22e-29,2;UBERON:0007771,2.22e-29,2;UBERON:0003297,2.22e-29,2;UBERON:0001821,2.22e-29,2;UBERON:0003487,2.22e-29,2;UBERON:0001820,2.22e-29,2;UBERON:0005089,2.22e-29,2;UBERON:0005088,2.22e-29,2;UBERON:0003350,9.70e-17,8;UBERON:0001828,9.70e-17,8;UBERON:0001003,2.06e-15,15;UBERON:0007376,2.06e-15,15;UBERON:0007383,2.06e-15,15;UBERON:0001708,2.22e-15,4;UBERON:0008895,2.22e-15,4;UBERON:0011159,1.69e-12,5;UBERON:0003102,8.65e-11,99;UBERON:0010188,1.43e-10,6;UBERON:0002539,1.43e-10,6;UBERON:0008816,1.43e-10,6;UBERON:0003729,1.54e-10,13;UBERON:0001004,6.65e-09,74;UBERON:0000344,4.91e-07,20 | |||
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|short_description=p@chr21:44957855..44957891,- | |short_description=p@chr21:44957855..44957891,- | ||
}} | }} |
Latest revision as of 18:18, 28 July 2015
Short description: | p@chr21:44957855..44957891, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:44957855..44957891, - |
Coexpression cluster: | C592_Sebocyte_Small_Keratinocyte_Gingival_Mallassezderived_oral_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 2.21e-43 | 3 |
general ecto-epithelial cell | 3.28e-36 | 14 |
sebum secreting cell | 2.22e-29 | 2 |
epithelial cell of sweat gland | 2.22e-29 | 2 |
epithelial cell of skin gland | 2.22e-29 | 2 |
acinar cell of sebaceous gland | 2.22e-29 | 2 |
epidermal cell | 1.98e-25 | 9 |
endo-epithelial cell | 6.86e-21 | 42 |
epithelial cell of Malassez | 3.66e-20 | 3 |
respiratory epithelial cell | 1.18e-17 | 13 |
epithelial cell of esophagus | 1.78e-15 | 1 |
endodermal cell | 5.94e-15 | 58 |
ecto-epithelial cell | 8.02e-15 | 34 |
acinar cell | 2.25e-12 | 5 |
keratinocyte | 2.99e-12 | 5 |
epithelial cell of alimentary canal | 1.01e-11 | 20 |
protein secreting cell | 1.81e-10 | 6 |
stratified squamous epithelial cell | 2.29e-10 | 6 |
keratin accumulating cell | 2.29e-10 | 6 |
stratified epithelial cell | 2.29e-10 | 6 |
keratinizing barrier epithelial cell | 2.29e-10 | 6 |
epithelial fate stem cell | 2.29e-10 | 6 |
stratified epithelial stem cell | 2.29e-10 | 6 |
surface ectodermal cell | 2.29e-10 | 6 |
embryonic cell | 1.04e-09 | 250 |
epithelial cell | 1.15e-09 | 253 |
glandular epithelial cell | 2.86e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.21e-43 | 3 |
skin gland | 2.22e-29 | 2 |
epidermis gland | 2.22e-29 | 2 |
gland of integumental system | 2.22e-29 | 2 |
sebaceous gland | 2.22e-29 | 2 |
skin sebaceous gland | 2.22e-29 | 2 |
sweat gland | 2.22e-29 | 2 |
sweat gland placode | 2.22e-29 | 2 |
sebaceous gland placode | 2.22e-29 | 2 |
epithelium of mucosa | 9.70e-17 | 8 |
gingiva | 9.70e-17 | 8 |
skin epidermis | 2.06e-15 | 15 |
outer epithelium | 2.06e-15 | 15 |
enveloping layer of ectoderm | 2.06e-15 | 15 |
jaw skeleton | 2.22e-15 | 4 |
splanchnocranium | 2.22e-15 | 4 |
primary subdivision of cranial skeletal system | 1.69e-12 | 5 |
surface structure | 8.65e-11 | 99 |
protuberance | 1.43e-10 | 6 |
pharyngeal arch | 1.43e-10 | 6 |
embryonic head | 1.43e-10 | 6 |
mouth mucosa | 1.54e-10 | 13 |
respiratory system | 6.65e-09 | 74 |
mucosa | 4.91e-07 | 20 |