FFCP PHASE1:Hg19::chr22:24166884..24166932,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:24166884..24166932,+ | |||
|coexpression_cluster_id=C34 | |coexpression_cluster_id=C34 | ||
|description=CAGE_peak_at_chr22:24166884..24166932,+ | |description=CAGE_peak_at_chr22:24166884..24166932,+ | ||
|id=chr22:24166884..24166932,+ | |id=chr22:24166884..24166932,+ | ||
|ontology_enrichment_celltype=CL:0002541!2.64e-29!3 | |ontology_enrichment_celltype=CL:0002541!2.64e-29!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;2.38e-44;3!CL:0002262;1.07e-17;2!CL:1000398;1.07e-17;2!CL:0000349;6.59e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.38e-44,3;CL:0002262,1.07e-17,2;CL:1000398,1.07e-17,2;CL:0000349,6.59e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.84e-34;1 | |||
|ontology_enrichment_disease=DOID:225!1.33e-10!1 | |ontology_enrichment_disease=DOID:225!1.33e-10!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!2.64e-29!3;UBERON:0000920!2.64e-29!3;UBERON:0003124!2.44e-22!7;UBERON:0005631!3.50e-17!14;UBERON:0000158!3.50e-17!14;UBERON:0001000!5.57e-11!1;UBERON:0005352!5.57e-11!1;UBERON:0002902!1.77e-10!1;UBERON:0009899!1.77e-10!1;UBERON:0000478!5.64e-10!24 | |ontology_enrichment_uberon=UBERON:0000476!2.64e-29!3;UBERON:0000920!2.64e-29!3;UBERON:0003124!2.44e-22!7;UBERON:0005631!3.50e-17!14;UBERON:0000158!3.50e-17!14;UBERON:0001000!5.57e-11!1;UBERON:0005352!5.57e-11!1;UBERON:0002902!1.77e-10!1;UBERON:0009899!1.77e-10!1;UBERON:0000478!5.64e-10!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.38e-44;3!UBERON:0000920;2.38e-44;3!UBERON:0001281;1.07e-17;2!UBERON:0003497;1.07e-17;2!UBERON:0003909;1.07e-17;2!UBERON:0003835;1.07e-17;2!UBERON:0005631;3.97e-14;10!UBERON:0000158;3.97e-14;10!UBERON:0000478;3.94e-13;24!UBERON:0001280;2.89e-12;3!UBERON:0004647;2.89e-12;3!UBERON:0001987;1.12e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.38e-44,3;UBERON:0003124,8.03e-43,7;UBERON:0005631,6.67e-22,14;UBERON:0000158,6.67e-22,14;UBERON:0001281,1.07e-17,2;UBERON:0003497,1.07e-17,2;UBERON:0003909,1.07e-17,2;UBERON:0003835,1.07e-17,2;UBERON:0000478,3.94e-13,24;UBERON:0001280,2.89e-12,3;UBERON:0004647,2.89e-12,3;UBERON:0005171,2.89e-12,3;UBERON:0001987,1.12e-09,4;UBERON:0004340,1.12e-09,4;UBERON:0002394,8.97e-07,6;UBERON:0003928,8.97e-07,6 | |||
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|short_description=p@chr22:24166884..24166932,+ | |short_description=p@chr22:24166884..24166932,+ | ||
}} | }} |
Latest revision as of 19:31, 28 July 2015
Short description: | p@chr22:24166884..24166932, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:24166884..24166932, + |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.38e-44 | 3 |
endothelial cell of sinusoid | 1.07e-17 | 2 |
endothelial cell of hepatic sinusoid | 1.07e-17 | 2 |
extraembryonic cell | 6.59e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.38e-44 | 3 |
chorion | 8.03e-43 | 7 |
extraembryonic membrane | 6.67e-22 | 14 |
membranous layer | 6.67e-22 | 14 |
hepatic sinusoid | 1.07e-17 | 2 |
abdomen blood vessel | 1.07e-17 | 2 |
sinusoid | 1.07e-17 | 2 |
abdominal segment blood vessel | 1.07e-17 | 2 |
extraembryonic structure | 3.94e-13 | 24 |
liver parenchyma | 2.89e-12 | 3 |
liver lobule | 2.89e-12 | 3 |
hepatic duct | 2.89e-12 | 3 |
placenta | 1.12e-09 | 4 |
allantois | 1.12e-09 | 4 |
bile duct | 8.97e-07 | 6 |
digestive system duct | 8.97e-07 | 6 |