FFCP PHASE1:Hg19::chr22:25507452..25507476,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:25507452..25507476,+ | |||
|description=CAGE_peak_at_chr22:25507452..25507476,+ | |description=CAGE_peak_at_chr22:25507452..25507476,+ | ||
|id=chr22:25507452..25507476,+ | |id=chr22:25507452..25507476,+ | ||
|ontology_enrichment_celltype=CL:0002139!1.83e-17!24;CL:0000071!7.22e-16!18;CL:0002546!7.22e-16!18;CL:0000115!2.99e-15!35;CL:0000066!2.02e-11!254;CL:0002078!2.73e-11!44;CL:1000413!6.68e-10!9;CL:0000076!8.99e-10!62;CL:0000223!6.88e-08!59;CL:0000213!2.94e-07!57;CL:0000215!2.94e-07!57;CL:0002544!3.90e-07!6 | |ontology_enrichment_celltype=CL:0002139!1.83e-17!24;CL:0000071!7.22e-16!18;CL:0002546!7.22e-16!18;CL:0000115!2.99e-15!35;CL:0000066!2.02e-11!254;CL:0002078!2.73e-11!44;CL:1000413!6.68e-10!9;CL:0000076!8.99e-10!62;CL:0000223!6.88e-08!59;CL:0000213!2.94e-07!57;CL:0000215!2.94e-07!57;CL:0002544!3.90e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000115;3.00e-23;36!CL:0002139;1.74e-20;24!CL:1000413;1.03e-16;9!CL:0000071;1.56e-14;18!CL:0002078;6.54e-12;45!CL:0002544;1.05e-11;6!CL:0000213;1.02e-10;58!CL:0000215;1.02e-10;58!CL:0002262;5.85e-10;2!CL:1000398;5.85e-10;2!CL:0002545;1.33e-09;2!CL:0000182;6.33e-09;12!CL:0002138;1.29e-07;6!CL:0002144;2.08e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.13e-24,36;CL:0002139,2.19e-20,24;CL:0002078,4.82e-19,45;CL:1000413,1.30e-16,9;CL:0000071,1.79e-14,18;CL:0002546,1.79e-14,18;CL:0000213,5.24e-14,58;CL:0000215,5.24e-14,58;CL:0002544,9.73e-12,6;CL:0002262,4.01e-10,2;CL:1000398,4.01e-10,2;CL:0002545,1.22e-09,2;CL:0000182,5.94e-09,12;CL:0000066,3.97e-08,253;CL:0005020,1.41e-07,6;CL:0002138,1.41e-07,6;CL:0005022,1.41e-07,6;CL:0002144,2.02e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.56e-14;18!CL:0005022;1.29e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003915;1.03e-16;9!UBERON:0004700;1.03e-16;9!UBERON:0001917;1.03e-16;9!UBERON:0004638;1.56e-14;18!UBERON:0001986;1.56e-14;18!UBERON:0004852;1.56e-14;18!UBERON:0000487;1.17e-11;22!UBERON:0006914;4.18e-10;25!UBERON:0001281;5.85e-10;2!UBERON:0003497;5.85e-10;2!UBERON:0003909;5.85e-10;2!UBERON:0003835;5.85e-10;2!UBERON:0000341;1.33e-09;2!UBERON:0005800;1.33e-09;2!UBERON:0005090;1.33e-09;2!UBERON:0001630;1.33e-09;2!UBERON:0001515;1.33e-09;2!UBERON:0002365;4.85e-08;31!UBERON:0002330;4.85e-08;31!UBERON:0002107;7.75e-08;19!UBERON:0006925;7.75e-08;19!UBERON:0010523;2.08e-07;3!UBERON:0001915;2.08e-07;3!UBERON:0001982;2.08e-07;3!UBERON:0000974;3.58e-07;6!UBERON:0000490;4.18e-07;33!UBERON:0001280;6.63e-07;3!UBERON:0004647;6.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,1.30e-16,9;UBERON:0004700,1.30e-16,9;UBERON:0001917,1.30e-16,9;UBERON:0004638,1.79e-14,18;UBERON:0001986,1.79e-14,18;UBERON:0004852,1.79e-14,18;UBERON:0000487,1.31e-11,22;UBERON:0001281,4.01e-10,2;UBERON:0003497,4.01e-10,2;UBERON:0003909,4.01e-10,2;UBERON:0003835,4.01e-10,2;UBERON:0005090,4.39e-10,2;UBERON:0001630,4.39e-10,2;UBERON:0006914,4.61e-10,25;UBERON:0005800,1.22e-09,2;UBERON:0001515,1.22e-09,2;UBERON:0004111,1.23e-09,240;UBERON:0000341,2.25e-09,2;UBERON:0000055,2.43e-08,68;UBERON:0000483,3.74e-08,306;UBERON:0000119,5.25e-08,309;UBERON:0002365,5.96e-08,31;UBERON:0002330,5.96e-08,31;UBERON:0002107,7.49e-08,19;UBERON:0006925,7.49e-08,19;UBERON:0008836,7.49e-08,19;UBERON:0010523,2.02e-07,3;UBERON:0001915,2.02e-07,3;UBERON:0001982,2.02e-07,3;UBERON:0000490,3.08e-07,148;UBERON:0003914,4.91e-07,117;UBERON:0001280,5.18e-07,3;UBERON:0004647,5.18e-07,3;UBERON:0005171,5.18e-07,3;UBERON:0002049,6.21e-07,78;UBERON:0007798,6.21e-07,78 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.12786256184353,0,0,0,0,0,0.472674085820339,0.221729397462564,0.263504357079378,0.196468613246569,1.09288586487763,0.370784442784429,0,0,0,0,0,0,1.78886166630035,0.860234595106124,1.04142150482278,0.56530794192401,1.25849830862972,0.825354125820202,1.04497483268405,2.32575083252396,3.20189636418039,3.3472061276467,4.83395180530976,0.760272105718513,8.7862340717341,1.10298924103761,1.62028389576352,0.803697554556718,0.898117490504679,0.788280363383256,0,0.949265659568129,0.916008719652036,0,0,0.872188104285069,0,0,0,0,0,1.12135520028461,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43402297694502,0.121973706129595,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95262181849859,1.40241773803446,0,0,1.26755034821831,0,1.18157981336281,0,0,0.171567810298526,0.658501712451753,0,0.201057944823262,0.277765335475589,0,0,0,0.34779121492523,0.117408694235822,0.577465791044295,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.358121926479791,0,0,0,0,0.508189248444927,2.60279707715243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,1.81434175997808,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,0,0,0,0,0,0.539107359730903,0.784349769176855,0,0.422206515571503,0,0.510281115829547,1.29549549661284,4.62681758070868,0.270946437543853,0,0,0,0.671624264166535,0,0,0.512900250232778,1.31205858279882,0.976135183992909,0.412164046590889,0,0,0,1.30012049207304,0,0.193341436584244,0,0,0,0,0,0.0852266274161009,0.267096106940212,0.330569830721956,0.576570202095319,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0.296964680832639,0,0,0.703347082052564,0,0.16480387422676,0,0.597743964753209,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.649376687132959,3.99227596002388,0.260427761085233,0.0874599999961957,0,0.568967241427498,0,0,0,0,0,0,0.60298219312704,0,0,0,0.87754158861589,0,0.41827123283581,0.384751292518985,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0.0884575645033392,0,0.296521128680622,0,0.104421949505455,0.134802265961354,1.60515529459758,0.937057782901357,0,0.391329237864179,0.242780379534093,0,0,0,0.189559738885464,0.300646838828985,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,0.969890164884194,1.235585773681,0.225980740780532,0,0,0.759729551470544,0.195551382734803,0,0,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0,0.203996435272644,0,0.600420288709789,0,0,0,0,0.558564802544508,0.687481272035051,0,0.199679000498991,0,0,0.268733889946905,0,0,0.472699093843342,0.412079291905832,0.539228350833479,1.18112977817699,0,0.795229689809303,0.136203406111576,0,0.137539436597234,0,0,0,1.15424157650247,0,0.236417121897595,0.629455057619977,0,0,0.767660789277781,0,0,0.25426853765475,0,0,0,0,0,0,0,3.22414914091781,0,0.258565912723101,0,0.342173675768659,0,0.320362237703084,0.78602152549833,0.414239055347196,0,0,0,0.638341257770182,0,0.2506898940227,0,0,0,0,0.244052529803926,0.250381861413,0,0,0.310482014706917,0,0.999843263696853,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323474434190045,0,0,0,0,0,0,0,0,0,0,0,0.834979926253974,0,1.11743701340006,0.82046545696302,0,1.03735878696327,0.484426936895553,0,0.196295437002051,0.589848616738702,2.75142897782519,0,0,0,0,0.150420656698515,0,0,0,0,0,0.945526184657525,0,0.413373593002368,0.507326481551255,0,0.548257766857182,0,0,3.96063525682745,0,0,0.606965604236632,0.227662191351298,0,0,0,0.543757863814654,0.920818829879887,0,0.111231401892069,0.941917114206168,0.157115589916002,0,0,0,0,0.714765441766563,0.158013611732727,0,0.521574816907738,0,0.207216164163037,0.6828739083758,2.76503864725637,0.860454717640555,0,0,0,0.22910686854405,0,0,0.447421727191169,0.196300467230486,0.487671699929078,1.94228651156368,4.72248911538736,1.1598144313382,0,0.233939463462106,0,0,0,0,0.150962843566674,0.0771741581079447,0,0.470317296361523,0,0,0,0,0.8453114551668,0,0,0.128915775947154,0,0.357107877211315,0,0,0,0.458729283404541,0,0,1.35982980381829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| ||
|short_description=p@chr22:25507452..25507476,+ | |short_description=p@chr22:25507452..25507476,+ | ||
}} | }} |
Latest revision as of 19:42, 28 July 2015
Short description: | p@chr22:25507452..25507476, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:25507452..25507476, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.13e-24 | 36 |
endothelial cell of vascular tree | 2.19e-20 | 24 |
meso-epithelial cell | 4.82e-19 | 45 |
endothelial cell of artery | 1.30e-16 | 9 |
blood vessel endothelial cell | 1.79e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.79e-14 | 18 |
lining cell | 5.24e-14 | 58 |
barrier cell | 5.24e-14 | 58 |
aortic endothelial cell | 9.73e-12 | 6 |
endothelial cell of sinusoid | 4.01e-10 | 2 |
endothelial cell of hepatic sinusoid | 4.01e-10 | 2 |
thoracic aorta endothelial cell | 1.22e-09 | 2 |
hepatocyte | 5.94e-09 | 12 |
epithelial cell | 3.97e-08 | 253 |
lymphangioblast | 1.41e-07 | 6 |
endothelial cell of lymphatic vessel | 1.41e-07 | 6 |
vascular lymphangioblast | 1.41e-07 | 6 |
capillary endothelial cell | 2.02e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
endothelial tube | 1.30e-16 | 9 |
arterial system endothelium | 1.30e-16 | 9 |
endothelium of artery | 1.30e-16 | 9 |
blood vessel endothelium | 1.79e-14 | 18 |
endothelium | 1.79e-14 | 18 |
cardiovascular system endothelium | 1.79e-14 | 18 |
simple squamous epithelium | 1.31e-11 | 22 |
hepatic sinusoid | 4.01e-10 | 2 |
abdomen blood vessel | 4.01e-10 | 2 |
sinusoid | 4.01e-10 | 2 |
abdominal segment blood vessel | 4.01e-10 | 2 |
muscle structure | 4.39e-10 | 2 |
muscle organ | 4.39e-10 | 2 |
squamous epithelium | 4.61e-10 | 25 |
segment of aorta | 1.22e-09 | 2 |
thoracic aorta | 1.22e-09 | 2 |
anatomical conduit | 1.23e-09 | 240 |
throat | 2.25e-09 | 2 |
vessel | 2.43e-08 | 68 |
epithelium | 3.74e-08 | 306 |
cell layer | 5.25e-08 | 309 |
exocrine gland | 5.96e-08 | 31 |
exocrine system | 5.96e-08 | 31 |
liver | 7.49e-08 | 19 |
digestive gland | 7.49e-08 | 19 |
liver bud | 7.49e-08 | 19 |
microcirculatory vessel | 2.02e-07 | 3 |
endothelium of capillary | 2.02e-07 | 3 |
capillary | 2.02e-07 | 3 |
unilaminar epithelium | 3.08e-07 | 148 |
epithelial tube | 4.91e-07 | 117 |
liver parenchyma | 5.18e-07 | 3 |
liver lobule | 5.18e-07 | 3 |
hepatic duct | 5.18e-07 | 3 |
vasculature | 6.21e-07 | 78 |
vascular system | 6.21e-07 | 78 |