FFCP PHASE1:Hg19::chr22:25507452..25507476,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr22:25507452..25507476,+
|short_description=p@chr22:25507452..25507476,+
|description=CAGE_peak_at_chr22:25507452..25507476,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr22:25507452..25507476,+ | |||
|description=CAGE_peak_at_chr22:25507452..25507476,+ | |||
|id=chr22:25507452..25507476,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.83e-17!24;CL:0000071!7.22e-16!18;CL:0002546!7.22e-16!18;CL:0000115!2.99e-15!35;CL:0000066!2.02e-11!254;CL:0002078!2.73e-11!44;CL:1000413!6.68e-10!9;CL:0000076!8.99e-10!62;CL:0000223!6.88e-08!59;CL:0000213!2.94e-07!57;CL:0000215!2.94e-07!57;CL:0002544!3.90e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000115;3.00e-23;36!CL:0002139;1.74e-20;24!CL:1000413;1.03e-16;9!CL:0000071;1.56e-14;18!CL:0002078;6.54e-12;45!CL:0002544;1.05e-11;6!CL:0000213;1.02e-10;58!CL:0000215;1.02e-10;58!CL:0002262;5.85e-10;2!CL:1000398;5.85e-10;2!CL:0002545;1.33e-09;2!CL:0000182;6.33e-09;12!CL:0002138;1.29e-07;6!CL:0002144;2.08e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.13e-24,36;CL:0002139,2.19e-20,24;CL:0002078,4.82e-19,45;CL:1000413,1.30e-16,9;CL:0000071,1.79e-14,18;CL:0002546,1.79e-14,18;CL:0000213,5.24e-14,58;CL:0000215,5.24e-14,58;CL:0002544,9.73e-12,6;CL:0002262,4.01e-10,2;CL:1000398,4.01e-10,2;CL:0002545,1.22e-09,2;CL:0000182,5.94e-09,12;CL:0000066,3.97e-08,253;CL:0005020,1.41e-07,6;CL:0002138,1.41e-07,6;CL:0005022,1.41e-07,6;CL:0002144,2.02e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.56e-14;18!CL:0005022;1.29e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003915;1.03e-16;9!UBERON:0004700;1.03e-16;9!UBERON:0001917;1.03e-16;9!UBERON:0004638;1.56e-14;18!UBERON:0001986;1.56e-14;18!UBERON:0004852;1.56e-14;18!UBERON:0000487;1.17e-11;22!UBERON:0006914;4.18e-10;25!UBERON:0001281;5.85e-10;2!UBERON:0003497;5.85e-10;2!UBERON:0003909;5.85e-10;2!UBERON:0003835;5.85e-10;2!UBERON:0000341;1.33e-09;2!UBERON:0005800;1.33e-09;2!UBERON:0005090;1.33e-09;2!UBERON:0001630;1.33e-09;2!UBERON:0001515;1.33e-09;2!UBERON:0002365;4.85e-08;31!UBERON:0002330;4.85e-08;31!UBERON:0002107;7.75e-08;19!UBERON:0006925;7.75e-08;19!UBERON:0010523;2.08e-07;3!UBERON:0001915;2.08e-07;3!UBERON:0001982;2.08e-07;3!UBERON:0000974;3.58e-07;6!UBERON:0000490;4.18e-07;33!UBERON:0001280;6.63e-07;3!UBERON:0004647;6.63e-07;3 | |||
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| ||
|short_description=p@chr22:25507452..25507476,+ | |||
}} | }} |
Latest revision as of 19:42, 28 July 2015
Short description: | p@chr22:25507452..25507476, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:25507452..25507476, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.13e-24 | 36 |
endothelial cell of vascular tree | 2.19e-20 | 24 |
meso-epithelial cell | 4.82e-19 | 45 |
endothelial cell of artery | 1.30e-16 | 9 |
blood vessel endothelial cell | 1.79e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.79e-14 | 18 |
lining cell | 5.24e-14 | 58 |
barrier cell | 5.24e-14 | 58 |
aortic endothelial cell | 9.73e-12 | 6 |
endothelial cell of sinusoid | 4.01e-10 | 2 |
endothelial cell of hepatic sinusoid | 4.01e-10 | 2 |
thoracic aorta endothelial cell | 1.22e-09 | 2 |
hepatocyte | 5.94e-09 | 12 |
epithelial cell | 3.97e-08 | 253 |
lymphangioblast | 1.41e-07 | 6 |
endothelial cell of lymphatic vessel | 1.41e-07 | 6 |
vascular lymphangioblast | 1.41e-07 | 6 |
capillary endothelial cell | 2.02e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
endothelial tube | 1.30e-16 | 9 |
arterial system endothelium | 1.30e-16 | 9 |
endothelium of artery | 1.30e-16 | 9 |
blood vessel endothelium | 1.79e-14 | 18 |
endothelium | 1.79e-14 | 18 |
cardiovascular system endothelium | 1.79e-14 | 18 |
simple squamous epithelium | 1.31e-11 | 22 |
hepatic sinusoid | 4.01e-10 | 2 |
abdomen blood vessel | 4.01e-10 | 2 |
sinusoid | 4.01e-10 | 2 |
abdominal segment blood vessel | 4.01e-10 | 2 |
muscle structure | 4.39e-10 | 2 |
muscle organ | 4.39e-10 | 2 |
squamous epithelium | 4.61e-10 | 25 |
segment of aorta | 1.22e-09 | 2 |
thoracic aorta | 1.22e-09 | 2 |
anatomical conduit | 1.23e-09 | 240 |
throat | 2.25e-09 | 2 |
vessel | 2.43e-08 | 68 |
epithelium | 3.74e-08 | 306 |
cell layer | 5.25e-08 | 309 |
exocrine gland | 5.96e-08 | 31 |
exocrine system | 5.96e-08 | 31 |
liver | 7.49e-08 | 19 |
digestive gland | 7.49e-08 | 19 |
liver bud | 7.49e-08 | 19 |
microcirculatory vessel | 2.02e-07 | 3 |
endothelium of capillary | 2.02e-07 | 3 |
capillary | 2.02e-07 | 3 |
unilaminar epithelium | 3.08e-07 | 148 |
epithelial tube | 4.91e-07 | 117 |
liver parenchyma | 5.18e-07 | 3 |
liver lobule | 5.18e-07 | 3 |
hepatic duct | 5.18e-07 | 3 |
vasculature | 6.21e-07 | 78 |
vascular system | 6.21e-07 | 78 |