FFCP PHASE1:Hg19::chr22:50063053..50063059,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:50063053..50063059,- | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_at_chr22:50063053..50063059,- | |description=CAGE_peak_at_chr22:50063053..50063059,- | ||
|id=chr22:50063053..50063059,- | |id=chr22:50063053..50063059,- | ||
|ontology_enrichment_celltype=CL:0000860!4.98e-07!45 | |ontology_enrichment_celltype=CL:0000860!4.98e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0002127;6.91e-10;1!CL:0000911;6.91e-10;1!CL:0002553;6.91e-10;1!CL:0000814;6.91e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,4.06e-10,1;CL:0000914,4.06e-10,1;CL:0000911,4.06e-10,1;CL:0000814,4.06e-10,1;CL:0002042,4.06e-10,1;CL:0002039,4.06e-10,1;CL:0002040,4.06e-10,1;CL:0002041,4.06e-10,1;CL:0002553,4.85e-10,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:9119;2.97e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,3.10e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002298!5.94e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;6.91e-10;1!UBERON:0001389;6.91e-10;1!UBERON:0000026;6.91e-10;1!UBERON:0008784;6.91e-10;1!UBERON:0006058;6.91e-10;1!UBERON:0003663;6.91e-10;1!UBERON:0004256;6.91e-10;1!UBERON:0004708;6.91e-10;1!UBERON:0002101;6.91e-10;1!UBERON:0004709;6.91e-10;1!UBERON:0002529;6.91e-10;1!UBERON:0010538;6.91e-10;1!UBERON:0003661;6.91e-10;1!UBERON:0010890;6.91e-10;1!UBERON:0002471;6.91e-10;1!UBERON:0001383;6.91e-10;1!UBERON:0010758;6.91e-10;1!UBERON:0010707;6.91e-10;1!UBERON:0000978;6.91e-10;1!UBERON:0002103;6.91e-10;1!UBERON:0001665;6.91e-10;1!UBERON:0003823;6.91e-10;1!UBERON:0000154;6.91e-10;1!UBERON:0010709;6.91e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,7.55e-10,1;UBERON:0001389,7.55e-10,1;UBERON:0000026,7.55e-10,1;UBERON:0008784,7.55e-10,1;UBERON:0006058,7.55e-10,1;UBERON:0003663,7.55e-10,1;UBERON:0004256,7.55e-10,1;UBERON:0004708,7.55e-10,1;UBERON:0002101,7.55e-10,1;UBERON:0004709,7.55e-10,1;UBERON:0002529,7.55e-10,1;UBERON:0010538,7.55e-10,1;UBERON:0003661,7.55e-10,1;UBERON:0010890,7.55e-10,1;UBERON:0002471,7.55e-10,1;UBERON:0001383,7.55e-10,1;UBERON:0004357,7.55e-10,1;UBERON:0004347,7.55e-10,1;UBERON:0005420,7.55e-10,1;UBERON:0005732,7.55e-10,1;UBERON:0010758,7.55e-10,1;UBERON:0010707,7.55e-10,1;UBERON:0000978,7.55e-10,1;UBERON:0002103,7.55e-10,1;UBERON:0001665,7.55e-10,1;UBERON:0003823,7.55e-10,1;UBERON:0000154,7.55e-10,1;UBERON:0010709,7.55e-10,1;UBERON:0005733,7.55e-10,1;UBERON:0005730,7.55e-10,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232401601740905,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0.619412741790207,0.28769239232215,0.256160706529101,0.709446689665756,0.344745680736619,0,1.35426486594342,0,0,0.224723484445085,0.306083892370903,0.641858054152187,0,0,0.398927315243264,0,0.290209238628584,0.56738522469114,0,0,1.0429658368404,0,0.605399502633369,0.368277635987565,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,2.22664428346111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357198913136319,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4512968087854,0.720599767084807,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,1.90544744788996,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,2.27466768141793,0.510281115829547,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0.144269212976445,0.142283686696828,0.159426272728822,0,2.8725805519855,16.298865869739,0,0.561594356226918,0,0.156679895773023,0,0,0,0,0.425846237690326,0.687010689511529,0,0,0,0,0,0,0,2.66457574398256,0,0,0,0.242721043499027,0,0.284136146806413,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0.689486746482929,0,0.173624994933292,0,0.120596438625408,0,0,0.295547618953547,0,0,0.139423744278603,0,0,0,0.179515288819544,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0.794682894901893,0,0,0,0,0,0,0.611030144933625,0.593042257361244,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,190.760419236991,0.933193722575224,0,0,0.313932918407225,0,0,0.138674673013139,0,0,0,0,0,0.290268993867255,0.146178634172371,0.0821154570532092,0,0,0.677942222341597,0.137041924646751,0,0,1.36885967914362,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0.305994652908965,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0.136203406111576,0,0.137539436597234,0.415440338029185,0.2249738915515,0,0.121499113316049,0,0.236417121897595,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0.170388021785422,0.226624183040251,0,1.32506888912221,0.258565912723101,0.13223260174269,0,0,0.320362237703084,0.78602152549833,0,0,0.197611631897944,0.243585196761792,1.27668251554036,0.544017803369474,0.2506898940227,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0.310482014706917,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0.782982875895635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0.211312123358627,0,0,0,0,0.184105950251841,0,0,2.68578179737669,0,0,0,0,0,0,0,0,0.157723490002507,1.60114149657094,0,0,0,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0.196295437002051,0.11796972334774,0,0,0,0,0.198916222116275,0.0752103283492573,1.0085253435176,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,0,0,0,0,0,0,0.606965604236632,0.682986574053893,0.620916591138472,0.806637912890455,0,0.203909198930495,0.197318320688547,0,0.111231401892069,0.078493092850514,0,0.560544326627578,0,0,0,0.500335809236594,2.84424501118908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,1.29485767437579,0,0,0,0,0,0,0,0,0.301925687133347,0,0.218559560503957,0,0,0,0,0,0,0,0,0.386747327841463,0,0,0.705789743431384,0,0,0,0.286679166302903,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,3.41004141982077,6.69910325390446,0,0.103432995861895,0.213233981900981,0.714193294391221,0,0.0620747142958579,0,0.318235791390825,0.404234377916439,0,0,0.134704106029175,0,0,0.0814032686109745,0,0,0,0,0.122241444182866,1.62758471326295,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232401601740905,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0.619412741790207,0.28769239232215,0.256160706529101,0.709446689665756,0.344745680736619,0,1.35426486594342,0,0,0.224723484445085,0.306083892370903,0.641858054152187,0,0,0.398927315243264,0,0.290209238628584,0.56738522469114,0,0,1.0429658368404,0,0.605399502633369,0.368277635987565,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,2.22664428346111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357198913136319,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4512968087854,0.720599767084807,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,1.90544744788996,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,2.27466768141793,0.510281115829547,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0.144269212976445,0.142283686696828,0.159426272728822,0,2.8725805519855,16.298865869739,0,0.561594356226918,0,0.156679895773023,0,0,0,0,0.425846237690326,0.687010689511529,0,0,0,0,0,0,0,2.66457574398256,0,0,0,0.242721043499027,0,0.284136146806413,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0.689486746482929,0,0.173624994933292,0,0.120596438625408,0,0,0.295547618953547,0,0,0.139423744278603,0,0,0,0.179515288819544,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0.794682894901893,0,0,0,0,0,0,0.611030144933625,0.593042257361244,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,190.760419236991,0.933193722575224,0,0,0.313932918407225,0,0,0.138674673013139,0,0,0,0,0,0.290268993867255,0.146178634172371,0.0821154570532092,0,0,0.677942222341597,0.137041924646751,0,0,1.36885967914362,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0.305994652908965,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0.0984274815147488,0.0846733320657845,0,0.136203406111576,0,0.137539436597234,0.415440338029185,0.2249738915515,0,0.121499113316049,0,0.236417121897595,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0.170388021785422,0.226624183040251,0,1.32506888912221,0.258565912723101,0.13223260174269,0,0,0.320362237703084,0.78602152549833,0,0,0.197611631897944,0.243585196761792,1.27668251554036,0.544017803369474,0.2506898940227,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0.310482014706917,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0.782982875895635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0.211312123358627,0,0,0,0,0.184105950251841,0,0,2.68578179737669,0,0,0,0,0,0,0,0,0.157723490002507,1.60114149657094,0,0,0,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0.196295437002051,0.11796972334774,0,0,0,0,0.198916222116275,0.0752103283492573,1.0085253435176,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,0,0,0,0,0,0,0.606965604236632,0.682986574053893,0.620916591138472,0.806637912890455,0,0.203909198930495,0.197318320688547,0,0.111231401892069,0.078493092850514,0,0.560544326627578,0,0,0,0.500335809236594,2.84424501118908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,0,1.29485767437579,0,0,0,0,0,0,0,0,0.301925687133347,0,0.218559560503957,0,0,0,0,0,0,0,0,0.386747327841463,0,0,0.705789743431384,0,0,0,0.286679166302903,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,3.41004141982077,6.69910325390446,0,0.103432995861895,0.213233981900981,0.714193294391221,0,0.0620747142958579,0,0.318235791390825,0.404234377916439,0,0,0.134704106029175,0,0,0.0814032686109745,0,0,0,0,0.122241444182866,1.62758471326295,0,0,0 | ||
|short_description=p@chr22:50063053..50063059,- | |short_description=p@chr22:50063053..50063059,- | ||
}} | }} |
Latest revision as of 22:19, 28 July 2015
Short description: | p@chr22:50063053..50063059, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:50063053..50063059, - |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 4.06e-10 | 1 |
immature NK T cell | 4.06e-10 | 1 |
effector T cell | 4.06e-10 | 1 |
mature NK T cell | 4.06e-10 | 1 |
immature NK T cell stage IV | 4.06e-10 | 1 |
immature NK T cell stage I | 4.06e-10 | 1 |
immature NK T cell stage II | 4.06e-10 | 1 |
immature NK T cell stage III | 4.06e-10 | 1 |
lung fibroblast | 4.85e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 7.55e-10 | 1 |
soleus muscle | 7.55e-10 | 1 |
appendage | 7.55e-10 | 1 |
lower limb segment | 7.55e-10 | 1 |
multi-limb segment region | 7.55e-10 | 1 |
hindlimb muscle | 7.55e-10 | 1 |
hindlimb zeugopod muscle | 7.55e-10 | 1 |
paired limb/fin | 7.55e-10 | 1 |
limb | 7.55e-10 | 1 |
pelvic appendage | 7.55e-10 | 1 |
limb segment | 7.55e-10 | 1 |
paired limb/fin segment | 7.55e-10 | 1 |
limb muscle | 7.55e-10 | 1 |
pelvic complex muscle | 7.55e-10 | 1 |
zeugopod | 7.55e-10 | 1 |
muscle of leg | 7.55e-10 | 1 |
paired limb/fin bud | 7.55e-10 | 1 |
limb bud | 7.55e-10 | 1 |
pelvic appendage bud | 7.55e-10 | 1 |
limb/fin field | 7.55e-10 | 1 |
subdivision of organism along appendicular axis | 7.55e-10 | 1 |
appendage girdle complex | 7.55e-10 | 1 |
leg | 7.55e-10 | 1 |
hindlimb | 7.55e-10 | 1 |
triceps surae | 7.55e-10 | 1 |
hindlimb zeugopod | 7.55e-10 | 1 |
posterior region of body | 7.55e-10 | 1 |
pelvic complex | 7.55e-10 | 1 |
limb field | 7.55e-10 | 1 |
hindlimb/pelvic fin field | 7.55e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 3.10e-10 | 1 |