FFCP PHASE1:Hg19::chr2:162762337..162762353,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:162762337..162762353,+ | |||
|coexpression_cluster_id=C121 | |||
|description=CAGE_peak_at_chr2:162762337..162762353,+ | |description=CAGE_peak_at_chr2:162762337..162762353,+ | ||
|id=chr2:162762337..162762353,+ | |id=chr2:162762337..162762353,+ | ||
|ontology_enrichment_celltype=CL:0000625!6.76e-31!11;CL:0000791!5.01e-29!18;CL:0000789!5.01e-29!18;CL:0002420!5.01e-29!18;CL:0002419!5.01e-29!18;CL:0000790!5.01e-29!18;CL:0000084!1.44e-24!25;CL:0000827!1.44e-24!25;CL:0000838!1.18e-17!52;CL:0000542!2.89e-17!53;CL:0000051!2.89e-17!53;CL:0000893!1.55e-12!2;CL:0002489!1.55e-12!2;CL:0000809!1.55e-12!2;CL:0000808!1.55e-12!2;CL:0000894!1.55e-12!2;CL:0000806!1.55e-12!2;CL:0000807!1.55e-12!2;CL:0000805!1.55e-12!2;CL:0002425!1.55e-12!2;CL:0002087!2.19e-09!119;CL:0000842!3.95e-08!3;CL:0000623!4.25e-08!3;CL:0000825!4.25e-08!3;CL:0000738!1.86e-07!140;CL:0000810!4.09e-07!1;CL:0000895!4.09e-07!1;CL:0002436!4.09e-07!1;CL:0002427!4.09e-07!1;CL:0002428!4.09e-07!1;CL:0002429!4.09e-07!1;CL:0002433!4.09e-07!1;CL:0002431!4.09e-07!1;CL:0002432!4.09e-07!1;CL:0002127!4.33e-07!1;CL:0000914!4.33e-07!1;CL:0000911!4.33e-07!1;CL:0000814!4.33e-07!1;CL:0002042!4.33e-07!1;CL:0002039!4.33e-07!1;CL:0002040!4.33e-07!1;CL:0002041!4.33e-07!1 | |ontology_enrichment_celltype=CL:0000625!6.76e-31!11;CL:0000791!5.01e-29!18;CL:0000789!5.01e-29!18;CL:0002420!5.01e-29!18;CL:0002419!5.01e-29!18;CL:0000790!5.01e-29!18;CL:0000084!1.44e-24!25;CL:0000827!1.44e-24!25;CL:0000838!1.18e-17!52;CL:0000542!2.89e-17!53;CL:0000051!2.89e-17!53;CL:0000893!1.55e-12!2;CL:0002489!1.55e-12!2;CL:0000809!1.55e-12!2;CL:0000808!1.55e-12!2;CL:0000894!1.55e-12!2;CL:0000806!1.55e-12!2;CL:0000807!1.55e-12!2;CL:0000805!1.55e-12!2;CL:0002425!1.55e-12!2;CL:0002087!2.19e-09!119;CL:0000842!3.95e-08!3;CL:0000623!4.25e-08!3;CL:0000825!4.25e-08!3;CL:0000738!1.86e-07!140;CL:0000810!4.09e-07!1;CL:0000895!4.09e-07!1;CL:0002436!4.09e-07!1;CL:0002427!4.09e-07!1;CL:0002428!4.09e-07!1;CL:0002429!4.09e-07!1;CL:0002433!4.09e-07!1;CL:0002431!4.09e-07!1;CL:0002432!4.09e-07!1;CL:0002127!4.33e-07!1;CL:0000914!4.33e-07!1;CL:0000911!4.33e-07!1;CL:0000814!4.33e-07!1;CL:0002042!4.33e-07!1;CL:0002039!4.33e-07!1;CL:0002040!4.33e-07!1;CL:0002041!4.33e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.72e-39;18!CL:0000789;1.72e-39;18!CL:0002419;1.72e-39;18!CL:0000895;7.48e-30;1!CL:0002127;9.99e-30;1!CL:0000911;9.99e-30;1!CL:0000814;9.99e-30;1!CL:0000084;1.35e-28;25!CL:0000625;9.75e-24;11!CL:0000542;3.75e-11;53!CL:0000898;6.73e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,1.13e-57,2;CL:0002489,1.13e-57,2;CL:0000809,1.13e-57,2;CL:0000808,1.13e-57,2;CL:0000894,1.13e-57,2;CL:0000806,1.13e-57,2;CL:0000807,1.13e-57,2;CL:0000805,1.13e-57,2;CL:0002425,1.13e-57,2;CL:0000791,1.59e-39,18;CL:0000789,1.59e-39,18;CL:0002420,1.59e-39,18;CL:0002419,1.59e-39,18;CL:0000790,1.59e-39,18;CL:0000810,7.48e-30,1;CL:0000895,7.48e-30,1;CL:0002436,7.48e-30,1;CL:0002427,7.48e-30,1;CL:0002428,7.48e-30,1;CL:0002429,7.48e-30,1;CL:0002433,7.48e-30,1;CL:0002431,7.48e-30,1;CL:0002432,7.48e-30,1;CL:0002127,9.99e-30,1;CL:0000914,9.99e-30,1;CL:0000911,9.99e-30,1;CL:0000814,9.99e-30,1;CL:0002042,9.99e-30,1;CL:0002039,9.99e-30,1;CL:0002040,9.99e-30,1;CL:0002041,9.99e-30,1;CL:0000084,1.27e-28,25;CL:0000827,1.27e-28,25;CL:0000625,9.02e-24,11;CL:0000838,5.38e-14,52;CL:0000542,9.72e-14,53;CL:0000051,9.72e-14,53;CL:0000898,6.73e-11,3 | |||
|ontology_enrichment_development_v019=CL:0002425;1.13e-57;2!CL:0000790;1.72e-39;18!CL:0002427;7.48e-30;1!CL:0000051;3.75e-11;53 | |||
|ontology_enrichment_disease=DOID:4960!8.49e-07!1;DOID:0070004!8.49e-07!1 | |ontology_enrichment_disease=DOID:4960!8.49e-07!1;DOID:0070004!8.49e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.44e-12!15;UBERON:0000179!1.44e-12!15;UBERON:0000463!1.44e-12!15;UBERON:0001871!8.44e-11!7;UBERON:0001869!8.08e-09!32;UBERON:0002780!1.93e-08!41;UBERON:0001890!1.93e-08!41;UBERON:0006240!1.93e-08!41;UBERON:0001950!2.00e-08!20;UBERON:0001893!3.00e-08!34;UBERON:0003080!3.27e-08!42;UBERON:0002619!1.21e-07!22;UBERON:0004177!1.24e-07!7;UBERON:0007023!5.67e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.78e-29,4;UBERON:0005058,1.78e-29,4;UBERON:0009113,1.78e-29,4;UBERON:0003295,1.78e-29,4;UBERON:0005562,1.78e-29,4;UBERON:0003351,4.86e-20,6;UBERON:0004177,2.46e-17,7;UBERON:0005057,2.46e-17,7;UBERON:0000974,1.89e-12,10;UBERON:0003408,1.89e-12,10;UBERON:0001042,1.89e-12,10;UBERON:0009145,1.89e-12,10;UBERON:0006562,2.07e-11,11;UBERON:0009722,2.07e-11,11;UBERON:0007690,2.07e-11,11;UBERON:0008814,2.44e-07,18;UBERON:0001557,5.34e-07,19 | |||
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|short_description=p@chr2:162762337..162762353,+ | |short_description=p@chr2:162762337..162762353,+ | ||
}} | }} |
Latest revision as of 01:56, 29 July 2015
Short description: | p@chr2:162762337..162762353, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:162762337..162762353, + |
Coexpression cluster: | C121_NK_Natural_CD8_CD4_anaplastic_chronic_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.78e-29 | 4 |
hemolymphoid system gland | 1.78e-29 | 4 |
thymic region | 1.78e-29 | 4 |
pharyngeal gland | 1.78e-29 | 4 |
thymus primordium | 1.78e-29 | 4 |
pharyngeal epithelium | 4.86e-20 | 6 |
hemopoietic organ | 2.46e-17 | 7 |
immune organ | 2.46e-17 | 7 |
neck | 1.89e-12 | 10 |
gland of gut | 1.89e-12 | 10 |
chordate pharynx | 1.89e-12 | 10 |
pharyngeal region of foregut | 1.89e-12 | 10 |
pharynx | 2.07e-11 | 11 |
entire pharyngeal arch endoderm | 2.07e-11 | 11 |
early pharyngeal endoderm | 2.07e-11 | 11 |
pharyngeal arch system | 2.44e-07 | 18 |
upper respiratory tract | 5.34e-07 | 19 |