FFCP PHASE1:Hg19::chr2:38947553..38947558,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:38947553..38947558,- | |||
|description=CAGE_peak_at_chr2:38947553..38947558,- | |||
|id=chr2:38947553..38947558,- | |||
|ontology_enrichment_celltype=CL:0000542!4.64e-07!53;CL:0000051!4.64e-07!53;CL:0002087!7.02e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000623;1.93e-20;3!CL:0000791;7.02e-13;18!CL:0000789;7.02e-13;18!CL:0002419;7.02e-13;18!CL:0000084;3.52e-12;25!CL:0002393;4.08e-10;6!CL:0002397;4.08e-10;6!CL:0002127;1.07e-07;1!CL:0000911;1.07e-07;1!CL:0000814;1.07e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.44e-20,3;CL:0000825,2.44e-20,3;CL:0000791,5.46e-13,18;CL:0000789,5.46e-13,18;CL:0002420,5.46e-13,18;CL:0002419,5.46e-13,18;CL:0000790,5.46e-13,18;CL:0000084,3.33e-12,25;CL:0000827,3.33e-12,25;CL:0000838,5.56e-11,52;CL:0000542,9.66e-11,53;CL:0000051,9.66e-11,53;CL:0002127,6.10e-08,1;CL:0000914,6.10e-08,1;CL:0000911,6.10e-08,1;CL:0000814,6.10e-08,1;CL:0002042,6.10e-08,1;CL:0002039,6.10e-08,1;CL:0002040,6.10e-08,1;CL:0002041,6.10e-08,1;CL:0002031,8.85e-08,120;CL:0000988,3.73e-07,177;CL:0002032,4.35e-07,161;CL:0000837,4.35e-07,161;CL:0002087,5.32e-07,115;CL:0002393,8.21e-07,9;CL:0002397,8.21e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000790;7.02e-13;18!UBERON:0005425;1.07e-07;1 | |||
|ontology_enrichment_disease=DOID:162!4.28e-16!235;DOID:0050687!8.33e-16!143;DOID:14566!1.20e-15!239;DOID:305!2.59e-13!106;DOID:0050686!9.96e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.04e-13;2!DOID:3307;1.04e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,3.67e-14,2;DOID:1909,7.55e-14,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.07e-07;1!UBERON:0001785;1.07e-07;1!UBERON:0002464;1.07e-07;1!UBERON:0004904;1.07e-07;1!UBERON:0001021;1.07e-07;1!UBERON:0002346;1.56e-07;4!UBERON:0000923;1.56e-07;4!UBERON:0010316;1.56e-07;4!UBERON:0005291;1.56e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,9.10e-08,1;UBERON:0001785,9.10e-08,1;UBERON:0002464,9.10e-08,1;UBERON:0004904,9.10e-08,1;UBERON:0001021,9.10e-08,1;UBERON:0003902,9.10e-08,1;UBERON:0005425,9.10e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0.568676929949686,0,1.10799081706375,1.00272223735071,1.51907609501096,0,0,0,0,0,0.242584061187816,0.232429036905685,0.411167888021826,0,0.28769239232215,0.256160706529101,0,0.344745680736619,0.645484683583826,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0,0,0.502497330513487,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0,0.300353785683013,0,0,0.19891667719909,0,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0,0.764546456250458,0,0,0,0.786839080455332,4.32311839024081,2.67281948699362,0,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,1.04535523804977,0,0.383220493601921,0.34362744548263,0,0,0,0,0,0,0,0,0,2.01606743224732,2.67440195783507,2.89648807765598,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0,0,0.238490624305342,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0,0,0.358234090811393,0,0,0,0.088048434013226,0.207328115540772,0,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79336230389644,1.18218456121156,2.37190332345469,2.56686072559497,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0,0,0.414415513436035,0.12269149171914,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0.173767228936166,0,0,0,0.647142602455851,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0.371606350251437,0.28853842595289,0.213425530045242,0.318852545457645,0.199579371432817,0,0.211673582723883,0,0,0.228234679033192,0,0,5.2480451118497,0,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0,0,1.4098700508785,0,0,0,0.111443384277478,0,0.47748896947538,0,0,0,0.281338832821026,0.445234820091624,0,0.844501632511974,0.398495976502139,0,0,0,0.738508832766417,0,0.539210106883961,0.358042349351218,0,0,0,0,0,0,0,0,0.699679999969566,0.724999575434793,0,0.508507300585533,0,0.689486746482929,2.33283690706603,0.173624994933292,0,0.120596438625408,0,1.21637185924347,0,0,0.435753854075961,0.139423744278603,0,0.113942055847001,0.23056390438806,0.179515288819544,0,0.31900115973192,0,0.533034776018635,1.02193298195737,0,0,0,0.19606253431774,0.167821586975843,0.37950746544837,0.794682894901893,0.421996129056054,0.489698424477443,0.848118428603645,0,0,0,0,1.77912677208373,0.123563938946503,0.313265848516366,0.067401132980677,0,0,0,0.586993856796269,0.728341138602278,0,0,0,0,0.150323419414493,0.207376382794494,0,0.330991955875499,0,0,0,0,0.173559738335131,0.195984794828755,0.783532859223623,0,0.171986032471617,0,0.146178634172371,0,0.193978032976839,0,0,0.137041924646751,0.19871461170299,0.0633107959558787,0.391102765469606,0.400794101257669,0,0.19980960958213,0.288180834308212,0,0,0.576219191952599,0.99402028452346,0,0.135904206073614,0.104602846312333,0.407992870545287,0,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0.599037001496973,0,0,0.134366944973453,0,0,0.0787831823072236,0,0,0.0984274815147488,0,0,0,0.321506296930038,0.137539436597234,0,0.2249738915515,0,0.0607495566580247,0,0,0.0524545881349981,0.528001682597033,0,0.383830394638891,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,1.02652102730598,0,0,0.157204305099666,0,0,0,0.243585196761792,0,1.08803560673895,0.2506898940227,1.53172788381731,0,0,0,0.122026264901963,0.1251909307065,0,0.332787154610557,0.0620964029413835,0.830091809617385,0.124980407962107,1.51649117541648,1.42732666772484,0.470531639396343,0.936669811613763,0.28984205722165,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,4.07439023612359,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0.982829546539238,0.245772908753719,0,0.19998739585493,0,0,0,0.552317850755522,0,0,0.255788742607303,0.107824811396682,0.314531883711793,0.54604819096007,0,1.2754495206101,3.47020139925206,0,0,0,0,0,0,0,0,0.478901577171454,0.205116364240755,0.504143392443436,0,0.161475645631851,1.42769420259154,0.0981477185010256,0.707818340086442,0,0.346576998451015,0,0,0.596748666348824,0.0752103283492573,0,0,0.261906694481422,0.655087670040387,0.591424344868181,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0.546974809018219,0,0.992422356778588,0,0,0,0,0,0,0.0887023701626388,0.691403925334676,0,0.0679697329768317,0,0.472775363535873,0.444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| |||
|short_description=p@chr2:38947553..38947558,- | |||
}} |
Latest revision as of 10:00, 29 July 2015
Short description: | p@chr2:38947553..38947558, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:38947553..38947558, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.44e-20 | 3 |
pro-NK cell | 2.44e-20 | 3 |
mature alpha-beta T cell | 5.46e-13 | 18 |
alpha-beta T cell | 5.46e-13 | 18 |
immature T cell | 5.46e-13 | 18 |
mature T cell | 5.46e-13 | 18 |
immature alpha-beta T cell | 5.46e-13 | 18 |
T cell | 3.33e-12 | 25 |
pro-T cell | 3.33e-12 | 25 |
lymphoid lineage restricted progenitor cell | 5.56e-11 | 52 |
lymphocyte | 9.66e-11 | 53 |
common lymphoid progenitor | 9.66e-11 | 53 |
innate effector T cell | 6.10e-08 | 1 |
immature NK T cell | 6.10e-08 | 1 |
effector T cell | 6.10e-08 | 1 |
mature NK T cell | 6.10e-08 | 1 |
immature NK T cell stage IV | 6.10e-08 | 1 |
immature NK T cell stage I | 6.10e-08 | 1 |
immature NK T cell stage II | 6.10e-08 | 1 |
immature NK T cell stage III | 6.10e-08 | 1 |
hematopoietic lineage restricted progenitor cell | 8.85e-08 | 120 |
hematopoietic cell | 3.73e-07 | 177 |
hematopoietic oligopotent progenitor cell | 4.35e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.35e-07 | 161 |
nongranular leukocyte | 5.32e-07 | 115 |
intermediate monocyte | 8.21e-07 | 9 |
CD14-positive, CD16-positive monocyte | 8.21e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 9.10e-08 | 1 |
cranial nerve | 9.10e-08 | 1 |
nerve trunk | 9.10e-08 | 1 |
nerve connecting eye with brain | 9.10e-08 | 1 |
nerve | 9.10e-08 | 1 |
retinal neural layer | 9.10e-08 | 1 |
presumptive neural retina | 9.10e-08 | 1 |