FFCP PHASE1:Hg19::chr2:56108781..56108808,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:56108781..56108808,- | |||
|coexpression_cluster_id=C395 | |coexpression_cluster_id=C395 | ||
|description=CAGE_peak_at_chr2:56108781..56108808,- | |description=CAGE_peak_at_chr2:56108781..56108808,- | ||
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|ontology_enrichment_celltype=CL:0000222!3.39e-27!119;CL:0002139!2.43e-18!24;CL:0000213!4.47e-18!57;CL:0000215!4.47e-18!57;CL:0002078!6.57e-14!44;CL:0000055!1.73e-13!180;CL:0000115!3.13e-13!35;CL:0000071!3.38e-13!18;CL:0002546!3.38e-13!18;CL:0000220!4.41e-13!246;CL:0002321!4.64e-13!248;CL:0000187!2.75e-12!54;CL:0000183!5.54e-11!59;CL:0000680!5.87e-11!57;CL:0000056!5.87e-11!57;CL:0000355!5.87e-11!57;CL:0002494!2.18e-10!16;CL:0000192!7.49e-10!42;CL:0000514!7.49e-10!42;CL:0000393!8.74e-10!60;CL:0000211!8.74e-10!60;CL:0000359!1.19e-09!32;CL:0000076!5.59e-09!62;CL:1000413!1.36e-08!9;CL:0000057!1.82e-07!75;CL:0005020!8.94e-07!6;CL:0002138!8.94e-07!6;CL:0005022!8.94e-07!6 | |ontology_enrichment_celltype=CL:0000222!3.39e-27!119;CL:0002139!2.43e-18!24;CL:0000213!4.47e-18!57;CL:0000215!4.47e-18!57;CL:0002078!6.57e-14!44;CL:0000055!1.73e-13!180;CL:0000115!3.13e-13!35;CL:0000071!3.38e-13!18;CL:0002546!3.38e-13!18;CL:0000220!4.41e-13!246;CL:0002321!4.64e-13!248;CL:0000187!2.75e-12!54;CL:0000183!5.54e-11!59;CL:0000680!5.87e-11!57;CL:0000056!5.87e-11!57;CL:0000355!5.87e-11!57;CL:0002494!2.18e-10!16;CL:0000192!7.49e-10!42;CL:0000514!7.49e-10!42;CL:0000393!8.74e-10!60;CL:0000211!8.74e-10!60;CL:0000359!1.19e-09!32;CL:0000076!5.59e-09!62;CL:1000413!1.36e-08!9;CL:0000057!1.82e-07!75;CL:0005020!8.94e-07!6;CL:0002138!8.94e-07!6;CL:0005022!8.94e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.09e-36;24!CL:0000071;4.87e-24;18!CL:0000115;4.90e-22;36!CL:0002078;7.45e-20;45!CL:1000413;1.45e-14;9!CL:0000213;2.01e-14;58!CL:0000215;2.01e-14;58!CL:0002138;4.69e-14;6!CL:0002494;1.38e-09;16!CL:0002544;4.97e-09;6!CL:0002548;8.63e-09;6!CL:0000135;1.90e-08;3!CL:0000388;1.90e-08;3!CL:0002144;9.82e-08;3!CL:0000136;1.28e-07;13!CL:0002595;2.52e-07;5!CL:0002618;5.26e-07;3!CL:0000153;6.84e-07;9!CL:0000447;6.84e-07;9 | |ontology_enrichment_celltype_v019=CL:0002139;4.09e-36;24!CL:0000071;4.87e-24;18!CL:0000115;4.90e-22;36!CL:0002078;7.45e-20;45!CL:1000413;1.45e-14;9!CL:0000213;2.01e-14;58!CL:0000215;2.01e-14;58!CL:0002138;4.69e-14;6!CL:0002494;1.38e-09;16!CL:0002544;4.97e-09;6!CL:0002548;8.63e-09;6!CL:0000135;1.90e-08;3!CL:0000388;1.90e-08;3!CL:0002144;9.82e-08;3!CL:0000136;1.28e-07;13!CL:0002595;2.52e-07;5!CL:0002618;5.26e-07;3!CL:0000153;6.84e-07;9!CL:0000447;6.84e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.31e-36,24;CL:0002078,2.03e-27,45;CL:0000115,3.78e-27,36;CL:0000213,4.14e-27,58;CL:0000215,4.14e-27,58;CL:0000071,2.82e-24,18;CL:0002546,2.82e-24,18;CL:0000222,4.09e-20,121;CL:1000413,5.64e-15,9;CL:0005020,4.77e-14,6;CL:0002138,4.77e-14,6;CL:0005022,4.77e-14,6;CL:0002494,1.07e-09,16;CL:0002544,2.98e-09,6;CL:0002548,5.73e-09,6;CL:0000076,7.96e-09,63;CL:0002321,1.95e-08,250;CL:0000135,2.08e-08,3;CL:0000388,2.08e-08,3;CL:0002144,1.39e-07,3;CL:0002595,2.56e-07,5;CL:0002618,6.02e-07,3;CL:0000153,7.01e-07,9;CL:0000447,7.01e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;4.87e-24;18!CL:0005022;4.69e-14;6 | |ontology_enrichment_development_v019=CL:0002546;4.87e-24;18!CL:0005022;4.69e-14;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.51e-28!84;UBERON:0000055!3.08e-24!69;UBERON:0002049!3.89e-24!79;UBERON:0007798!3.89e-24!79;UBERON:0004535!1.10e-23!110;UBERON:0001009!3.02e-23!113;UBERON:0001981!1.36e-21!60;UBERON:0007500!1.36e-21!60;UBERON:0004537!1.36e-21!60;UBERON:0006965!1.36e-21!60;UBERON:0003914!1.13e-19!118;UBERON:0001637!2.08e-18!42;UBERON:0003509!2.08e-18!42;UBERON:0004572!2.08e-18!42;UBERON:0000477!1.42e-15!286;UBERON:0004573!1.33e-14!33;UBERON:0004571!1.33e-14!33;UBERON:0004111!1.46e-14!241;UBERON:0000490!1.31e-13!138;UBERON:0006914!2.96e-13!25;UBERON:0001986!3.38e-13!18;UBERON:0004638!3.38e-13!18;UBERON:0004852!3.38e-13!18;UBERON:0000483!1.85e-12!309;UBERON:0000025!3.21e-12!194;UBERON:0000119!5.60e-12!312;UBERON:0000487!3.66e-11!22;UBERON:0000947!2.96e-10!21;UBERON:0010191!2.96e-10!21;UBERON:0002385!7.18e-10!63;UBERON:0001015!7.18e-10!63;UBERON:0000383!7.18e-10!63;UBERON:0000948!1.20e-09!24;UBERON:0005498!1.20e-09!24;UBERON:0004140!1.20e-09!24;UBERON:0009881!1.20e-09!24;UBERON:0004141!1.20e-09!24;UBERON:0003084!1.20e-09!24;UBERON:0007005!1.20e-09!24;UBERON:0004139!1.20e-09!24;UBERON:0004291!1.20e-09!24;UBERON:0001134!2.00e-09!61;UBERON:0002036!2.00e-09!61;UBERON:0003082!2.00e-09!61;UBERON:0007100!7.43e-09!27;UBERON:0003915!1.36e-08!9;UBERON:0004700!1.36e-08!9;UBERON:0001917!1.36e-08!9;UBERON:0004290!6.00e-08!70;UBERON:0000468!2.04e-07!659;UBERON:0000486!2.36e-07!82;UBERON:0000914!4.43e-07!83;UBERON:0002329!4.43e-07!83;UBERON:0003077!4.43e-07!83;UBERON:0003059!4.43e-07!83;UBERON:0007282!4.43e-07!83;UBERON:0009618!4.43e-07!83;UBERON:0007285!4.43e-07!83 | |ontology_enrichment_uberon=UBERON:0004872!1.51e-28!84;UBERON:0000055!3.08e-24!69;UBERON:0002049!3.89e-24!79;UBERON:0007798!3.89e-24!79;UBERON:0004535!1.10e-23!110;UBERON:0001009!3.02e-23!113;UBERON:0001981!1.36e-21!60;UBERON:0007500!1.36e-21!60;UBERON:0004537!1.36e-21!60;UBERON:0006965!1.36e-21!60;UBERON:0003914!1.13e-19!118;UBERON:0001637!2.08e-18!42;UBERON:0003509!2.08e-18!42;UBERON:0004572!2.08e-18!42;UBERON:0000477!1.42e-15!286;UBERON:0004573!1.33e-14!33;UBERON:0004571!1.33e-14!33;UBERON:0004111!1.46e-14!241;UBERON:0000490!1.31e-13!138;UBERON:0006914!2.96e-13!25;UBERON:0001986!3.38e-13!18;UBERON:0004638!3.38e-13!18;UBERON:0004852!3.38e-13!18;UBERON:0000483!1.85e-12!309;UBERON:0000025!3.21e-12!194;UBERON:0000119!5.60e-12!312;UBERON:0000487!3.66e-11!22;UBERON:0000947!2.96e-10!21;UBERON:0010191!2.96e-10!21;UBERON:0002385!7.18e-10!63;UBERON:0001015!7.18e-10!63;UBERON:0000383!7.18e-10!63;UBERON:0000948!1.20e-09!24;UBERON:0005498!1.20e-09!24;UBERON:0004140!1.20e-09!24;UBERON:0009881!1.20e-09!24;UBERON:0004141!1.20e-09!24;UBERON:0003084!1.20e-09!24;UBERON:0007005!1.20e-09!24;UBERON:0004139!1.20e-09!24;UBERON:0004291!1.20e-09!24;UBERON:0001134!2.00e-09!61;UBERON:0002036!2.00e-09!61;UBERON:0003082!2.00e-09!61;UBERON:0007100!7.43e-09!27;UBERON:0003915!1.36e-08!9;UBERON:0004700!1.36e-08!9;UBERON:0001917!1.36e-08!9;UBERON:0004290!6.00e-08!70;UBERON:0000468!2.04e-07!659;UBERON:0000486!2.36e-07!82;UBERON:0000914!4.43e-07!83;UBERON:0002329!4.43e-07!83;UBERON:0003077!4.43e-07!83;UBERON:0003059!4.43e-07!83;UBERON:0007282!4.43e-07!83;UBERON:0009618!4.43e-07!83;UBERON:0007285!4.43e-07!83 | ||
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| ||
|short_description=p@chr2:56108781..56108808,- | |short_description=p@chr2:56108781..56108808,- | ||
}} | }} |
Latest revision as of 11:00, 29 July 2015
Short description: | p@chr2:56108781..56108808, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:56108781..56108808, - |
Coexpression cluster: | C395_Synoviocyte_Cardiac_Fibroblast_mesothelioma_Endothelial_Chondrocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.31e-36 | 24 |
meso-epithelial cell | 2.03e-27 | 45 |
endothelial cell | 3.78e-27 | 36 |
lining cell | 4.14e-27 | 58 |
barrier cell | 4.14e-27 | 58 |
blood vessel endothelial cell | 2.82e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.82e-24 | 18 |
mesodermal cell | 4.09e-20 | 121 |
endothelial cell of artery | 5.64e-15 | 9 |
lymphangioblast | 4.77e-14 | 6 |
endothelial cell of lymphatic vessel | 4.77e-14 | 6 |
vascular lymphangioblast | 4.77e-14 | 6 |
cardiocyte | 1.07e-09 | 16 |
aortic endothelial cell | 2.98e-09 | 6 |
cardiac fibroblast | 5.73e-09 | 6 |
squamous epithelial cell | 7.96e-09 | 63 |
embryonic cell | 1.95e-08 | 250 |
fibrocyte | 2.08e-08 | 3 |
tendon cell | 2.08e-08 | 3 |
capillary endothelial cell | 1.39e-07 | 3 |
smooth muscle cell of the subclavian artery | 2.56e-07 | 5 |
endothelial cell of umbilical vein | 6.02e-07 | 3 |
GAG secreting cell | 7.01e-07 | 9 |
carbohydrate secreting cell | 7.01e-07 | 9 |