FFCP PHASE1:Hg19::chr2:56144945..56144975,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:56144945..56144975,-
|short_description=p@chr2:56144945..56144975,-
|description=CAGE_peak_at_chr2:56144945..56144975,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:56144945..56144975,- | |||
|coexpression_cluster_id=C395 | |||
|description=CAGE_peak_at_chr2:56144945..56144975,- | |||
|id=chr2:56144945..56144975,- | |||
|ontology_enrichment_celltype=CL:0000222!2.00e-22!119;CL:0002139!1.73e-16!24;CL:0000213!1.45e-14!57;CL:0000215!1.45e-14!57;CL:0000055!1.49e-13!180;CL:0000071!1.83e-12!18;CL:0002546!1.83e-12!18;CL:0000220!4.50e-12!246;CL:0000115!8.90e-12!35;CL:0002078!1.07e-11!44;CL:0002321!1.26e-11!248;CL:0000680!5.47e-10!57;CL:0000056!5.47e-10!57;CL:0000355!5.47e-10!57;CL:0000187!6.82e-10!54;CL:0000359!1.16e-08!32;CL:0000076!1.30e-08!62;CL:0000057!1.55e-08!75;CL:0002494!1.58e-08!16;CL:0000192!1.91e-08!42;CL:0000514!1.91e-08!42;CL:0000183!2.49e-08!59;CL:0000393!9.29e-08!60;CL:0000211!9.29e-08!60;CL:1000413!7.63e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.57e-26;24!CL:0000071;2.48e-19;18!CL:0000115;3.57e-17;36!CL:0002078;1.28e-13;45!CL:0000213;4.29e-12;58!CL:0000215;4.29e-12;58!CL:1000413;4.46e-10;9!CL:0002494;5.22e-10;16!CL:0002138;3.28e-08;6!CL:0002543;1.88e-07;6!CL:0000359;2.01e-07;32!CL:0002548;3.35e-07;6!CL:0000153;5.14e-07;9!CL:0000447;5.14e-07;9!CL:0002595;9.24e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.93e-26,24;CL:0000222,1.28e-22,121;CL:0000115,1.32e-20,36;CL:0000213,5.64e-20,58;CL:0000215,5.64e-20,58;CL:0000071,1.39e-19,18;CL:0002546,1.39e-19,18;CL:0002078,2.75e-19,45;CL:0000057,8.16e-12,76;CL:0002321,3.68e-11,250;CL:1000413,2.63e-10,9;CL:0002494,5.29e-10,16;CL:0005020,3.10e-08,6;CL:0002138,3.10e-08,6;CL:0005022,3.10e-08,6;CL:0000359,1.09e-07,32;CL:0002543,1.95e-07,6;CL:0000153,4.06e-07,9;CL:0000447,4.06e-07,9;CL:0002548,5.12e-07,6;CL:0000076,6.90e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;2.48e-19;18!CL:0005022;3.28e-08;6!CL:0000222;3.05e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.70e-29!84;UBERON:0002049!1.13e-25!79;UBERON:0007798!1.13e-25!79;UBERON:0000055!4.26e-25!69;UBERON:0001981!1.21e-23!60;UBERON:0007500!1.21e-23!60;UBERON:0004537!1.21e-23!60;UBERON:0006965!1.21e-23!60;UBERON:0000477!3.49e-23!286;UBERON:0004535!1.48e-21!110;UBERON:0001009!1.88e-21!113;UBERON:0004111!2.97e-19!241;UBERON:0003914!1.65e-18!118;UBERON:0001637!5.22e-17!42;UBERON:0003509!5.22e-17!42;UBERON:0004572!5.22e-17!42;UBERON:0000025!1.70e-16!194;UBERON:0000483!2.13e-15!309;UBERON:0000119!1.06e-14!312;UBERON:0000490!2.24e-14!138;UBERON:0004573!1.23e-12!33;UBERON:0004571!1.23e-12!33;UBERON:0006914!1.40e-12!25;UBERON:0000468!1.55e-12!659;UBERON:0001986!1.83e-12!18;UBERON:0004638!1.83e-12!18;UBERON:0004852!1.83e-12!18;UBERON:0000487!2.50e-11!22;UBERON:0000467!9.34e-11!625;UBERON:0000480!1.36e-10!626;UBERON:0000475!1.85e-10!365;UBERON:0002385!6.74e-09!63;UBERON:0001015!6.74e-09!63;UBERON:0000383!6.74e-09!63;UBERON:0000948!6.81e-09!24;UBERON:0005498!6.81e-09!24;UBERON:0004140!6.81e-09!24;UBERON:0009881!6.81e-09!24;UBERON:0004141!6.81e-09!24;UBERON:0003084!6.81e-09!24;UBERON:0007005!6.81e-09!24;UBERON:0004139!6.81e-09!24;UBERON:0004291!6.81e-09!24;UBERON:0001134!1.23e-08!61;UBERON:0002036!1.23e-08!61;UBERON:0003082!1.23e-08!61;UBERON:0007100!1.66e-08!27;UBERON:0000481!6.18e-08!347;UBERON:0000947!1.80e-07!21;UBERON:0010191!1.80e-07!21;UBERON:0002100!3.14e-07!216;UBERON:0003915!7.63e-07!9;UBERON:0004700!7.63e-07!9;UBERON:0001917!7.63e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.48e-19;18!UBERON:0001986;2.48e-19;18!UBERON:0004852;2.48e-19;18!UBERON:0006914;1.09e-17;25!UBERON:0001637;1.81e-17;42!UBERON:0003509;1.81e-17;42!UBERON:0004572;1.81e-17;42!UBERON:0000487;2.83e-16;22!UBERON:0007500;3.16e-16;56!UBERON:0001981;3.16e-16;56!UBERON:0004537;3.16e-16;56!UBERON:0000055;5.74e-16;65!UBERON:0004573;4.33e-15;33!UBERON:0004571;4.33e-15;33!UBERON:0000490;3.86e-13;33!UBERON:0002049;1.97e-12;75!UBERON:0007798;1.97e-12;75!UBERON:0000947;2.99e-11;21!UBERON:0010191;2.99e-11;21!UBERON:0003915;4.46e-10;9!UBERON:0004700;4.46e-10;9!UBERON:0001917;4.46e-10;9!UBERON:0004535;5.30e-10;109!UBERON:0003914;2.14e-09;74!UBERON:0004457;1.22e-08;9!UBERON:0000042;1.22e-08;9!UBERON:0000948;2.19e-08;22!UBERON:0001009;8.40e-08;112!UBERON:0003688;2.19e-07;6!UBERON:0002358;2.19e-07;6!UBERON:0003684;2.19e-07;6!UBERON:0001178;2.19e-07;6!UBERON:0000025;6.35e-07;93!UBERON:0007100;6.77e-07;25!UBERON:0003834;9.24e-07;5!UBERON:0001533;9.24e-07;5 | |||
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| ||
|short_description=p@chr2:56144945..56144975,- | |||
}} | }} |
Latest revision as of 11:01, 29 July 2015
Short description: | p@chr2:56144945..56144975, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:56144945..56144975, - |
Coexpression cluster: | C395_Synoviocyte_Cardiac_Fibroblast_mesothelioma_Endothelial_Chondrocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.93e-26 | 24 |
mesodermal cell | 1.28e-22 | 121 |
endothelial cell | 1.32e-20 | 36 |
lining cell | 5.64e-20 | 58 |
barrier cell | 5.64e-20 | 58 |
blood vessel endothelial cell | 1.39e-19 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.39e-19 | 18 |
meso-epithelial cell | 2.75e-19 | 45 |
fibroblast | 8.16e-12 | 76 |
embryonic cell | 3.68e-11 | 250 |
endothelial cell of artery | 2.63e-10 | 9 |
cardiocyte | 5.29e-10 | 16 |
lymphangioblast | 3.10e-08 | 6 |
endothelial cell of lymphatic vessel | 3.10e-08 | 6 |
vascular lymphangioblast | 3.10e-08 | 6 |
vascular associated smooth muscle cell | 1.09e-07 | 32 |
vein endothelial cell | 1.95e-07 | 6 |
GAG secreting cell | 4.06e-07 | 9 |
carbohydrate secreting cell | 4.06e-07 | 9 |
cardiac fibroblast | 5.12e-07 | 6 |
squamous epithelial cell | 6.90e-07 | 63 |