FFCP PHASE1:Hg19::chr2:56145124..56145158,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:56145124..56145158,+ | |||
|coexpression_cluster_id=C395 | |coexpression_cluster_id=C395 | ||
|description=CAGE_peak_at_chr2:56145124..56145158,+ | |description=CAGE_peak_at_chr2:56145124..56145158,+ | ||
|id=chr2:56145124..56145158,+ | |id=chr2:56145124..56145158,+ | ||
|ontology_enrichment_celltype=CL:0000222!7.94e-25!119;CL:0002139!2.02e-18!24;CL:0000213!2.04e-15!57;CL:0000215!2.04e-15!57;CL:0000071!4.46e-14!18;CL:0002546!4.46e-14!18;CL:0002078!3.96e-13!44;CL:0000220!1.23e-12!246;CL:0002321!1.60e-12!248;CL:0000055!2.26e-12!180;CL:0000115!1.28e-11!35;CL:0000680!1.14e-10!57;CL:0000056!1.14e-10!57;CL:0000355!1.14e-10!57;CL:0000076!1.58e-10!62;CL:0000187!3.22e-10!54;CL:0002494!3.79e-10!16;CL:0000359!1.29e-09!32;CL:0000183!5.44e-09!59;CL:0000192!1.25e-08!42;CL:0000514!1.25e-08!42;CL:0000393!1.99e-08!60;CL:0000211!1.99e-08!60;CL:1000413!5.42e-08!9;CL:0000057!9.16e-08!75 | |ontology_enrichment_celltype=CL:0000222!7.94e-25!119;CL:0002139!2.02e-18!24;CL:0000213!2.04e-15!57;CL:0000215!2.04e-15!57;CL:0000071!4.46e-14!18;CL:0002546!4.46e-14!18;CL:0002078!3.96e-13!44;CL:0000220!1.23e-12!246;CL:0002321!1.60e-12!248;CL:0000055!2.26e-12!180;CL:0000115!1.28e-11!35;CL:0000680!1.14e-10!57;CL:0000056!1.14e-10!57;CL:0000355!1.14e-10!57;CL:0000076!1.58e-10!62;CL:0000187!3.22e-10!54;CL:0002494!3.79e-10!16;CL:0000359!1.29e-09!32;CL:0000183!5.44e-09!59;CL:0000192!1.25e-08!42;CL:0000514!1.25e-08!42;CL:0000393!1.99e-08!60;CL:0000211!1.99e-08!60;CL:1000413!5.42e-08!9;CL:0000057!9.16e-08!75 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.45e-31;24!CL:0000071;3.11e-23;18!CL:0000115;1.10e-20;36!CL:0002078;8.57e-17;45!CL:0000213;5.20e-14;58!CL:0000215;5.20e-14;58!CL:0002494;1.53e-12;16!CL:1000413;1.27e-11;9!CL:0002548;3.83e-10;6!CL:0002138;6.84e-10;6!CL:0000359;4.13e-09;32!CL:0002543;8.37e-09;6!CL:0002595;3.35e-08;5!CL:0002544;1.21e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.36e-32,24;CL:0000222,4.53e-28,121;CL:0000213,4.30e-25,58;CL:0000215,4.30e-25,58;CL:0000115,8.54e-25,36;CL:0002078,8.17e-24,45;CL:0000071,2.02e-23,18;CL:0002546,2.02e-23,18;CL:0002494,1.54e-12,16;CL:1000413,1.26e-11,9;CL:0002321,3.70e-11,250;CL:0000057,6.29e-11,76;CL:0002548,4.19e-10,6;CL:0005020,5.32e-10,6;CL:0002138,5.32e-10,6;CL:0005022,5.32e-10,6;CL:0000359,2.08e-09,32;CL:0002543,5.83e-09,6;CL:0000076,3.81e-08,63;CL:0002595,4.46e-08,5;CL:0002544,1.22e-07,6;CL:0000187,1.78e-07,55;CL:0000136,7.16e-07,15;CL:0000680,8.23e-07,58;CL:0000056,8.23e-07,58;CL:0000355,8.23e-07,58;CL:0000192,9.95e-07,43;CL:0000514,9.95e-07,43 | |||
|ontology_enrichment_development_v019=CL:0002546;3.11e-23;18!CL:0005022;6.84e-10;6!CL:0000222;2.58e-08;121 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!5.28e-29!84;UBERON:0002049!8.51e-27!79;UBERON:0007798!8.51e-27!79;UBERON:0000055!1.76e-25!69;UBERON:0004535!3.33e-24!110;UBERON:0001981!1.28e-23!60;UBERON:0007500!1.28e-23!60;UBERON:0004537!1.28e-23!60;UBERON:0006965!1.28e-23!60;UBERON:0001009!1.89e-23!113;UBERON:0003914!6.27e-21!118;UBERON:0001637!4.01e-19!42;UBERON:0003509!4.01e-19!42;UBERON:0004572!4.01e-19!42;UBERON:0000477!1.02e-17!286;UBERON:0004573!1.39e-14!33;UBERON:0004571!1.39e-14!33;UBERON:0004111!1.49e-14!241;UBERON:0000490!2.25e-14!138;UBERON:0001986!4.46e-14!18;UBERON:0004638!4.46e-14!18;UBERON:0004852!4.46e-14!18;UBERON:0000025!1.25e-13!194;UBERON:0000483!5.50e-13!309;UBERON:0006914!8.44e-13!25;UBERON:0000119!1.99e-12!312;UBERON:0000487!2.91e-11!22;UBERON:0000468!7.16e-10!659;UBERON:0001134!1.39e-09!61;UBERON:0002036!1.39e-09!61;UBERON:0003082!1.39e-09!61;UBERON:0000947!2.13e-09!21;UBERON:0010191!2.13e-09!21;UBERON:0000948!2.13e-09!24;UBERON:0005498!2.13e-09!24;UBERON:0004140!2.13e-09!24;UBERON:0009881!2.13e-09!24;UBERON:0004141!2.13e-09!24;UBERON:0003084!2.13e-09!24;UBERON:0007005!2.13e-09!24;UBERON:0004139!2.13e-09!24;UBERON:0004291!2.13e-09!24;UBERON:0002385!7.89e-09!63;UBERON:0001015!7.89e-09!63;UBERON:0000383!7.89e-09!63;UBERON:0007100!2.70e-08!27;UBERON:0003915!5.42e-08!9;UBERON:0004700!5.42e-08!9;UBERON:0001917!5.42e-08!9;UBERON:0000486!1.61e-07!82;UBERON:0000467!2.55e-07!625;UBERON:0000480!3.33e-07!626;UBERON:0004290!4.61e-07!70;UBERON:0000475!5.37e-07!365 | |ontology_enrichment_uberon=UBERON:0004872!5.28e-29!84;UBERON:0002049!8.51e-27!79;UBERON:0007798!8.51e-27!79;UBERON:0000055!1.76e-25!69;UBERON:0004535!3.33e-24!110;UBERON:0001981!1.28e-23!60;UBERON:0007500!1.28e-23!60;UBERON:0004537!1.28e-23!60;UBERON:0006965!1.28e-23!60;UBERON:0001009!1.89e-23!113;UBERON:0003914!6.27e-21!118;UBERON:0001637!4.01e-19!42;UBERON:0003509!4.01e-19!42;UBERON:0004572!4.01e-19!42;UBERON:0000477!1.02e-17!286;UBERON:0004573!1.39e-14!33;UBERON:0004571!1.39e-14!33;UBERON:0004111!1.49e-14!241;UBERON:0000490!2.25e-14!138;UBERON:0001986!4.46e-14!18;UBERON:0004638!4.46e-14!18;UBERON:0004852!4.46e-14!18;UBERON:0000025!1.25e-13!194;UBERON:0000483!5.50e-13!309;UBERON:0006914!8.44e-13!25;UBERON:0000119!1.99e-12!312;UBERON:0000487!2.91e-11!22;UBERON:0000468!7.16e-10!659;UBERON:0001134!1.39e-09!61;UBERON:0002036!1.39e-09!61;UBERON:0003082!1.39e-09!61;UBERON:0000947!2.13e-09!21;UBERON:0010191!2.13e-09!21;UBERON:0000948!2.13e-09!24;UBERON:0005498!2.13e-09!24;UBERON:0004140!2.13e-09!24;UBERON:0009881!2.13e-09!24;UBERON:0004141!2.13e-09!24;UBERON:0003084!2.13e-09!24;UBERON:0007005!2.13e-09!24;UBERON:0004139!2.13e-09!24;UBERON:0004291!2.13e-09!24;UBERON:0002385!7.89e-09!63;UBERON:0001015!7.89e-09!63;UBERON:0000383!7.89e-09!63;UBERON:0007100!2.70e-08!27;UBERON:0003915!5.42e-08!9;UBERON:0004700!5.42e-08!9;UBERON:0001917!5.42e-08!9;UBERON:0000486!1.61e-07!82;UBERON:0000467!2.55e-07!625;UBERON:0000480!3.33e-07!626;UBERON:0004290!4.61e-07!70;UBERON:0000475!5.37e-07!365 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.11e-23;18!UBERON:0001986;3.11e-23;18!UBERON:0004852;3.11e-23;18!UBERON:0006914;5.06e-22;25!UBERON:0000487;4.42e-20;22!UBERON:0004573;2.66e-18;33!UBERON:0004571;2.66e-18;33!UBERON:0001637;1.09e-17;42!UBERON:0003509;1.09e-17;42!UBERON:0004572;1.09e-17;42!UBERON:0000055;7.29e-17;65!UBERON:0007500;9.92e-15;56!UBERON:0001981;9.92e-15;56!UBERON:0004537;9.92e-15;56!UBERON:0000490;5.45e-13;33!UBERON:0002049;6.23e-13;75!UBERON:0007798;6.23e-13;75!UBERON:0000947;4.40e-12;21!UBERON:0010191;4.40e-12;21!UBERON:0003915;1.27e-11;9!UBERON:0004700;1.27e-11;9!UBERON:0001917;1.27e-11;9!UBERON:0004457;9.83e-11;9!UBERON:0000042;9.83e-11;9!UBERON:0003914;3.39e-10;74!UBERON:0004535;1.05e-09;109!UBERON:0000948;1.35e-09;22!UBERON:0003688;5.41e-09;6!UBERON:0002358;5.41e-09;6!UBERON:0003684;5.41e-09;6!UBERON:0001178;5.41e-09;6!UBERON:0001009;1.25e-08;112!UBERON:0003834;3.35e-08;5!UBERON:0001533;3.35e-08;5!UBERON:0007100;4.91e-08;25!UBERON:0001473;3.70e-07;8!UBERON:0004536;3.70e-07;8!UBERON:0006558;3.70e-07;8!UBERON:0000025;5.94e-07;93 | |||
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| ||
|short_description=p@chr2:56145124..56145158,+ | |short_description=p@chr2:56145124..56145158,+ | ||
}} | }} |
Latest revision as of 11:01, 29 July 2015
Short description: | p@chr2:56145124..56145158, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:56145124..56145158, + |
Coexpression cluster: | C395_Synoviocyte_Cardiac_Fibroblast_mesothelioma_Endothelial_Chondrocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.36e-32 | 24 |
mesodermal cell | 4.53e-28 | 121 |
lining cell | 4.30e-25 | 58 |
barrier cell | 4.30e-25 | 58 |
endothelial cell | 8.54e-25 | 36 |
meso-epithelial cell | 8.17e-24 | 45 |
blood vessel endothelial cell | 2.02e-23 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.02e-23 | 18 |
cardiocyte | 1.54e-12 | 16 |
endothelial cell of artery | 1.26e-11 | 9 |
embryonic cell | 3.70e-11 | 250 |
fibroblast | 6.29e-11 | 76 |
cardiac fibroblast | 4.19e-10 | 6 |
lymphangioblast | 5.32e-10 | 6 |
endothelial cell of lymphatic vessel | 5.32e-10 | 6 |
vascular lymphangioblast | 5.32e-10 | 6 |
vascular associated smooth muscle cell | 2.08e-09 | 32 |
vein endothelial cell | 5.83e-09 | 6 |
squamous epithelial cell | 3.81e-08 | 63 |
smooth muscle cell of the subclavian artery | 4.46e-08 | 5 |
aortic endothelial cell | 1.22e-07 | 6 |
muscle cell | 1.78e-07 | 55 |
fat cell | 7.16e-07 | 15 |
muscle precursor cell | 8.23e-07 | 58 |
myoblast | 8.23e-07 | 58 |
multi-potent skeletal muscle stem cell | 8.23e-07 | 58 |
smooth muscle cell | 9.95e-07 | 43 |
smooth muscle myoblast | 9.95e-07 | 43 |