FFCP PHASE1:Hg19::chr2:66660768..66660782,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:66660768..66660782,+
|short_description=p@chr2:66660768..66660782,+
|description=CAGE_peak_at_chr2:66660768..66660782,+
|association_with_transcript=NA
|E...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:66660768..66660782,+ | |||
|description=CAGE_peak_at_chr2:66660768..66660782,+ | |||
|id=chr2:66660768..66660782,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000632;3.63e-21;3!CL:0002591;4.72e-17;1!CL:0000047;6.42e-09;2!CL:0002262;6.42e-09;2!CL:1000398;6.42e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,4.02e-21,3;CL:0002591,4.72e-17,1;CL:0002262,6.42e-09,2;CL:1000398,6.42e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3571;1.65e-16;1!DOID:3350;6.42e-09;2!DOID:3193;6.42e-09;2!DOID:962;6.42e-09;2!DOID:3307;6.42e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,2.63e-16,1;DOID:3193,4.70e-09,2;DOID:962,4.70e-09,2;DOID:3307,5.08e-09,2;DOID:3350,8.09e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002346!4.72e-08!90;UBERON:0003075!9.05e-08!86;UBERON:0007284!9.05e-08!86;UBERON:0000475!3.31e-07!365;UBERON:0003076!7.37e-07!15;UBERON:0003057!7.37e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;3.43e-09;2!UBERON:0002012;3.43e-09;2!UBERON:0008886;3.43e-09;2!UBERON:0003714;6.42e-09;2!UBERON:0001281;6.42e-09;2!UBERON:0003497;6.42e-09;2!UBERON:0003909;6.42e-09;2!UBERON:0003835;6.42e-09;2!UBERON:0002107;8.58e-08;19!UBERON:0006925;8.58e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,3.43e-09,2;UBERON:0007497,3.43e-09,2;UBERON:0003643,3.43e-09,2;UBERON:0003504,3.43e-09,2;UBERON:0003469,3.43e-09,2;UBERON:0003496,3.43e-09,2;UBERON:0002012,3.43e-09,2;UBERON:0008886,3.43e-09,2;UBERON:0007303,3.43e-09,2;UBERON:0002061,3.43e-09,2;UBERON:0005432,3.43e-09,2;UBERON:0004363,3.43e-09,2;UBERON:0003714,4.70e-09,2;UBERON:0001281,6.42e-09,2;UBERON:0003497,6.42e-09,2;UBERON:0003909,6.42e-09,2;UBERON:0003835,6.42e-09,2;UBERON:0002107,8.79e-08,19;UBERON:0006925,8.79e-08,19;UBERON:0008836,8.79e-08,19;UBERON:0008835,8.61e-07,22;UBERON:0003894,8.61e-07,22 | |||
|phase1_expression=0,0,0.281908808191942,1.0007329835313,0.446961094427288,0,2.53299878168311,0,0,0,0,0,0.263766978228454,0,0.331397375727916,0,0,0,0.487932798790507,0.369363174230364,0,0.626909442956176,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.709446689665756,0,0,0,0,0,0,0,0.320929027076094,0,0.329851300186716,0.199463657621632,0,0,0.56738522469114,1.24564449799115,0,0.521482918420201,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.661743720148475,0.665188192387692,0.263504357079378,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.626984899610432,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.872188104285069,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.269421344139376,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0.300091096084402,0.206105058476878,0,0.558350568994769,0.337552664482532,0.194874010322397,0,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0.232387885739037,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0.241011029883482,0,0,0,0,0.392442930250692,0,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0.115930404975077,0.234817388471643,0.144366447761074,0.462985512576611,0.190254152234598,3.1608175918371,0.858486162094873,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0,0,0,0,0,0,0,0,0.415941723061614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0.280660094433074,0,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0,0,0.232420756919918,0,0.200506470303285,0.0920809889358963,0.229628896329213,0,0.786746489756545,0,0,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0.435050081742686,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0.37064843820784,0.143124886741991,0,0,0,0.511795582622668,0.42793898803392,0,0.78494864019923,0.179872457583315,0.274537029736055,0,0,0,0,0.975267478179181,0.487426979262569,0,0.272999822815972,0.282810863907425,4.52032466480971,0,0,0,0.578775534266688,0,0.202910376962704,0.6196469961995,0.281695602532241,0,0,0,0.709522128141196,0.211107635297664,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,2.32216445855572,0.886642856860642,0,0,0.139423744278603,0.230850775511391,0,0,0,0,0,0,0,0,0.156980256395025,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.19351266257817,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0.514784993585894,0,0,0,0.271808412147228,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,1.08089965062721,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0.415440338029185,0.2249738915515,0,0,0,0.0788057072991982,0.209818352539992,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.258565912723101,0.39669780522807,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0.468334905806882,0.579684114443301,0.298509605773748,0.233713309847224,0,0,0.251567901752575,0,0,0.302461847526478,0.310874401165561,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0.380805212168795,0,0.181848659202559,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.276516872303462,0.779441235357554,0.132864840313363,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0.247871528518004,1.67593475391973,0.318004350653419,0,0,0.352675943690684,0,0,0,0.319267718114302,0,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413373593002368,0,0.546974809018219,0,0,0.175871244359621,0,0,0,0,0,0,0,0.171488009437418,0.203909198930495,0.131545547125698,0,0,0.078493092850514,0.157115589916002,0,0.913158720509496,0,0,0.0714765441766563,0.632054446930906,0,0,1.60342272946051,0.207216164163037,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0.795803100645473,0,0,0.109940516745429,0,0.0771741581079447,0.218559560503957,0,0.490296643507811,0,0.392616934229891,0,0.4226557275834,0,0,0.128915775947154,0,0,0.352894871715692,0,0.730336388246517,0,0.430018749454354,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0.327796715891087,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.103432995861895,0.213233981900981,0.23806443146374,0,0.0620747142958579,0.224263725161227,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | |phase1_expression=0,0,0.281908808191942,1.0007329835313,0.446961094427288,0,2.53299878168311,0,0,0,0,0,0.263766978228454,0,0.331397375727916,0,0,0,0.487932798790507,0.369363174230364,0,0.626909442956176,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.709446689665756,0,0,0,0,0,0,0,0.320929027076094,0,0.329851300186716,0.199463657621632,0,0,0.56738522469114,1.24564449799115,0,0.521482918420201,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.661743720148475,0.665188192387692,0.263504357079378,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0.626984899610432,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.872188104285069,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.269421344139376,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0.300091096084402,0.206105058476878,0,0.558350568994769,0.337552664482532,0.194874010322397,0,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0.232387885739037,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0.241011029883482,0,0,0,0,0.392442930250692,0,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,1.44331342025273,0.115930404975077,0.234817388471643,0.144366447761074,0.462985512576611,0.190254152234598,3.1608175918371,0.858486162094873,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0,0,0,0,0,0,0,0,0.415941723061614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0.280660094433074,0,0.511707249066704,0.160853921143607,0,0,0.177561725313127,0,0,0.232420756919918,0,0.200506470303285,0.0920809889358963,0.229628896329213,0,0.786746489756545,0,0,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0.435050081742686,0,0,0,0,0,0,0,0.62962469366128,0,0,0,0,0.37064843820784,0.143124886741991,0,0,0,0.511795582622668,0.42793898803392,0,0.78494864019923,0.179872457583315,0.274537029736055,0,0,0,0,0.975267478179181,0.487426979262569,0,0.272999822815972,0.282810863907425,4.52032466480971,0,0,0,0.578775534266688,0,0.202910376962704,0.6196469961995,0.281695602532241,0,0,0,0.709522128141196,0.211107635297664,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,2.32216445855572,0.886642856860642,0,0,0.139423744278603,0.230850775511391,0,0,0,0,0,0,0,0,0.156980256395025,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.19351266257817,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0.514784993585894,0,0,0,0.271808412147228,0,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,1.08089965062721,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0.415440338029185,0.2249738915515,0,0,0,0.0788057072991982,0.209818352539992,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.258565912723101,0.39669780522807,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0.468334905806882,0.579684114443301,0.298509605773748,0.233713309847224,0,0,0.251567901752575,0,0,0.302461847526478,0.310874401165561,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0.380805212168795,0,0.181848659202559,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.276516872303462,0.779441235357554,0.132864840313363,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0.247871528518004,1.67593475391973,0.318004350653419,0,0,0.352675943690684,0,0,0,0.319267718114302,0,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413373593002368,0,0.546974809018219,0,0,0.175871244359621,0,0,0,0,0,0,0,0.171488009437418,0.203909198930495,0.131545547125698,0,0,0.078493092850514,0.157115589916002,0,0.913158720509496,0,0,0.0714765441766563,0.632054446930906,0,0,1.60342272946051,0.207216164163037,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0.795803100645473,0,0,0.109940516745429,0,0.0771741581079447,0.218559560503957,0,0.490296643507811,0,0.392616934229891,0,0.4226557275834,0,0,0.128915775947154,0,0,0.352894871715692,0,0.730336388246517,0,0.430018749454354,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0.327796715891087,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.103432995861895,0.213233981900981,0.23806443146374,0,0.0620747142958579,0.224263725161227,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0.244482888365733,0.406896178315738,0,0,0 | ||
|short_description=p@chr2:66660768..66660782,+ | |||
}} | }} |
Latest revision as of 11:32, 29 July 2015
Short description: | p@chr2:66660768..66660782, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:66660768..66660782, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 4.02e-21 | 3 |
smooth muscle cell of the pulmonary artery | 4.72e-17 | 1 |
endothelial cell of sinusoid | 6.42e-09 | 2 |
endothelial cell of hepatic sinusoid | 6.42e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 3.43e-09 | 2 |
developing epithelial placode | 3.43e-09 | 2 |
respiratory system arterial blood vessel | 3.43e-09 | 2 |
respiratory system blood vessel | 3.43e-09 | 2 |
respiratory system artery | 3.43e-09 | 2 |
head blood vessel | 3.43e-09 | 2 |
pulmonary artery | 3.43e-09 | 2 |
pulmonary vascular system | 3.43e-09 | 2 |
pharyngeal vasculature | 3.43e-09 | 2 |
truncus arteriosus | 3.43e-09 | 2 |
aortic sac | 3.43e-09 | 2 |
pharyngeal arch artery | 3.43e-09 | 2 |
neural tissue | 4.70e-09 | 2 |
hepatic sinusoid | 6.42e-09 | 2 |
abdomen blood vessel | 6.42e-09 | 2 |
sinusoid | 6.42e-09 | 2 |
abdominal segment blood vessel | 6.42e-09 | 2 |
liver | 8.79e-08 | 19 |
digestive gland | 8.79e-08 | 19 |
liver bud | 8.79e-08 | 19 |
hepatic diverticulum | 8.61e-07 | 22 |
liver primordium | 8.61e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 2.63e-16 | 1 |
peripheral nerve sheath neoplasm | 4.70e-09 | 2 |
neurofibroma | 4.70e-09 | 2 |
teratoma | 5.08e-09 | 2 |
mesenchymal cell neoplasm | 8.09e-09 | 2 |