FFCP PHASE1:Hg19::chr2:8820960..8820963,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:8820960..8820963,- | |||
|coexpression_cluster_id=C122 | |||
|description=CAGE_peak_at_chr2:8820960..8820963,- | |||
|id=chr2:8820960..8820963,- | |||
|ontology_enrichment_celltype=CL:0000838!1.95e-10!52;CL:0000542!4.01e-10!53;CL:0000051!4.01e-10!53 | |||
|ontology_enrichment_celltype_v019=CL:0002127;2.21e-40;1!CL:0000785;2.21e-40;1!CL:0000911;2.21e-40;1!CL:0000819;2.21e-40;1!CL:0000814;2.21e-40;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,1.48e-40,1;CL:0002127,2.21e-40,1;CL:0000914,2.21e-40,1;CL:0000911,2.21e-40,1;CL:0000814,2.21e-40,1;CL:0002042,2.21e-40,1;CL:0002039,2.21e-40,1;CL:0002040,2.21e-40,1;CL:0002041,2.21e-40,1;CL:0000785,4.66e-21,2;CL:0000955,4.66e-21,2;CL:0000818,4.66e-21,2;CL:0000954,4.66e-21,2;CL:0000816,4.66e-21,2;CL:0000893,5.70e-21,2;CL:0002489,5.70e-21,2;CL:0000809,5.70e-21,2;CL:0000808,5.70e-21,2;CL:0000894,5.70e-21,2;CL:0000806,5.70e-21,2;CL:0000807,5.70e-21,2;CL:0000805,5.70e-21,2;CL:0002425,5.70e-21,2;CL:0000817,1.60e-14,3 | |||
|ontology_enrichment_development_v019=CL:0000954;5.69e-21;2!CL:0002425;5.69e-21;2 | |||
|ontology_enrichment_disease=DOID:162!7.07e-10!235;DOID:14566!2.31e-09!239;DOID:0060058!1.36e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:0060073;2.21e-40;1!DOID:8675;2.21e-40;1!DOID:1036;6.64e-21;8!DOID:2531;6.10e-12;51!DOID:0060083;6.10e-12;51!DOID:1240;3.08e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,1.48e-40,1;DOID:8675,1.48e-40,1;DOID:1036,6.64e-21,8;DOID:2531,3.93e-13,51;DOID:0060083,3.93e-13,51;DOID:1240,5.54e-10,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001871;6.04e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.42e-11,4;UBERON:0005058,3.42e-11,4;UBERON:0009113,3.42e-11,4;UBERON:0003295,3.42e-11,4;UBERON:0005562,3.42e-11,4;UBERON:0003351,6.78e-08,6;UBERON:0004177,6.04e-07,7;UBERON:0005057,6.04e-07,7;UBERON:0001871,6.39e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0.383829398097213,0.154816123316076,0,0,0,0,0.284338464974843,0,0.553995408531877,0.200544447470142,0.434021741431704,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0.802320587350522,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34502172792233,0,0.862510299438069,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0.284567373393656,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0,0,0,0.18714054040822,0,0,0.557216921387392,0,0,0,0,0,0,0.111308705022906,0.16480387422676,0,0.19924798825107,0,0,0,0.123084805461069,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0.699679999969566,0,0.796554137998498,0,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,4.36433585265626,3.49660473756833,0.210998064528027,0.163232808159148,0.424059214301822,0,0,0,0,0.889563386041866,0.370691816839509,0.417687798021821,0.269604531922708,0,0,1.45963831372533,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.17472666824203,0.171986032471617,0.0967563312890851,0,0,0,0,0,0,0.19871461170299,0.0633107959558787,0,0,0.213452994739353,0,0.144090417154106,0.114536596165916,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0.423366660328922,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656740165994712,0,0.113312091520126,0,0,0,0,0.171086837884329,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.244052529803926,0.1251909307065,0,0,0,0,0,0.758245587708239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0.337884881306145,0.256241518587947,0,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0.59996218756479,0,0.172214979660816,0,0,0,0,0,0.107824811396682,0.157265941855896,0,0,0,0.247871528518004,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0.346576998451015,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.921871900446234,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0.142953088353313,0.158013611732727,0.23248285073625,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0.487671699929078,0,0,0,0,0.233939463462106,0.198950775161368,0,0,0,0.150962843566674,0.0771741581079447,0.218559560503957,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0.128915775947154,0.499705779624645,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0.109265571963696,0.126698501011437,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:8820960..8820963,- | |||
}} |
Latest revision as of 12:57, 29 July 2015
Short description: | p@chr2:8820960..8820963, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:8820960..8820963, - |
Coexpression cluster: | C122_chronic_Reticulocytes_skeletal_leukemia_acute_colon_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 1.48e-40 | 1 |
innate effector T cell | 2.21e-40 | 1 |
immature NK T cell | 2.21e-40 | 1 |
effector T cell | 2.21e-40 | 1 |
mature NK T cell | 2.21e-40 | 1 |
immature NK T cell stage IV | 2.21e-40 | 1 |
immature NK T cell stage I | 2.21e-40 | 1 |
immature NK T cell stage II | 2.21e-40 | 1 |
immature NK T cell stage III | 2.21e-40 | 1 |
mature B cell | 4.66e-21 | 2 |
pre-B-II cell | 4.66e-21 | 2 |
transitional stage B cell | 4.66e-21 | 2 |
small pre-B-II cell | 4.66e-21 | 2 |
immature B cell | 4.66e-21 | 2 |
thymocyte | 5.70e-21 | 2 |
double negative thymocyte | 5.70e-21 | 2 |
double-positive, alpha-beta thymocyte | 5.70e-21 | 2 |
DN4 thymocyte | 5.70e-21 | 2 |
DN1 thymic pro-T cell | 5.70e-21 | 2 |
DN2 thymocyte | 5.70e-21 | 2 |
DN3 thymocyte | 5.70e-21 | 2 |
immature single positive thymocyte | 5.70e-21 | 2 |
early T lineage precursor | 5.70e-21 | 2 |
precursor B cell | 1.60e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.42e-11 | 4 |
hemolymphoid system gland | 3.42e-11 | 4 |
thymic region | 3.42e-11 | 4 |
pharyngeal gland | 3.42e-11 | 4 |
thymus primordium | 3.42e-11 | 4 |
pharyngeal epithelium | 6.78e-08 | 6 |
hemopoietic organ | 6.04e-07 | 7 |
immune organ | 6.04e-07 | 7 |
temporal lobe | 6.39e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 1.48e-40 | 1 |
lymphosarcoma | 1.48e-40 | 1 |
chronic leukemia | 6.64e-21 | 8 |
hematologic cancer | 3.93e-13 | 51 |
immune system cancer | 3.93e-13 | 51 |
leukemia | 5.54e-10 | 39 |