FFCP PHASE1:Hg19::chr2:95715295..95715305,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:95715295..95715305,+ | |||
|description=CAGE_peak_at_chr2:95715295..95715305,+ | |description=CAGE_peak_at_chr2:95715295..95715305,+ | ||
|id=chr2:95715295..95715305,+ | |id=chr2:95715295..95715305,+ | ||
|ontology_enrichment_celltype=CL:0002127!3.58e-26!1;CL:0000914!3.58e-26!1;CL:0000911!3.58e-26!1;CL:0000814!3.58e-26!1;CL:0002042!3.58e-26!1;CL:0002039!3.58e-26!1;CL:0002040!3.58e-26!1;CL:0002041!3.58e-26!1;CL:0000893!8.28e-14!2;CL:0002489!8.28e-14!2;CL:0000809!8.28e-14!2;CL:0000808!8.28e-14!2;CL:0000894!8.28e-14!2;CL:0000806!8.28e-14!2;CL:0000807!8.28e-14!2;CL:0000805!8.28e-14!2;CL:0002425!8.28e-14!2 | |ontology_enrichment_celltype=CL:0002127!3.58e-26!1;CL:0000914!3.58e-26!1;CL:0000911!3.58e-26!1;CL:0000814!3.58e-26!1;CL:0002042!3.58e-26!1;CL:0002039!3.58e-26!1;CL:0002040!3.58e-26!1;CL:0002041!3.58e-26!1;CL:0000893!8.28e-14!2;CL:0002489!8.28e-14!2;CL:0000809!8.28e-14!2;CL:0000808!8.28e-14!2;CL:0000894!8.28e-14!2;CL:0000806!8.28e-14!2;CL:0000807!8.28e-14!2;CL:0000805!8.28e-14!2;CL:0002425!8.28e-14!2 | ||
|ontology_enrichment_celltype_v019=CL:0002127;5.12e-50;1!CL:0000911;5.12e-50;1!CL:0000814;5.12e-50;1!CL:0000084;5.95e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,3.99e-50,1;CL:0000914,3.99e-50,1;CL:0000911,3.99e-50,1;CL:0000814,3.99e-50,1;CL:0002042,3.99e-50,1;CL:0002039,3.99e-50,1;CL:0002040,3.99e-50,1;CL:0002041,3.99e-50,1;CL:0000893,7.14e-26,2;CL:0002489,7.14e-26,2;CL:0000809,7.14e-26,2;CL:0000808,7.14e-26,2;CL:0000894,7.14e-26,2;CL:0000806,7.14e-26,2;CL:0000807,7.14e-26,2;CL:0000805,7.14e-26,2;CL:0002425,7.14e-26,2;CL:0000084,5.95e-09,25;CL:0000827,5.95e-09,25 | |||
|ontology_enrichment_development_v019=CL:0002425;8.10e-26;2!UBERON:0004872;1.96e-08;7 | |||
|ontology_enrichment_disease=DOID:0060058!5.69e-11!10 | |ontology_enrichment_disease=DOID:0060058!5.69e-11!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;8.54e-21;10!DOID:2531;1.03e-09;51!DOID:0060083;1.03e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,9.44e-21,10;DOID:2531,1.28e-09,51;DOID:0060083,1.28e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0004177!4.27e-88!7;UBERON:0002370!2.60e-56!4;UBERON:0005058!2.60e-56!4;UBERON:0009113!2.60e-56!4;UBERON:0003295!2.60e-56!4;UBERON:0005562!2.60e-56!4;UBERON:0003351!7.14e-38!6;UBERON:0002106!7.70e-34!3;UBERON:0004854!7.70e-34!3;UBERON:0009034!7.70e-34!3;UBERON:0002095!7.70e-34!3;UBERON:0004782!7.70e-34!3;UBERON:0003281!7.70e-34!3;UBERON:0009664!7.70e-34!3;UBERON:0002296!7.70e-34!3;UBERON:0005602!7.70e-34!3;UBERON:0001179!7.70e-34!3;UBERON:0006293!7.70e-34!3;UBERON:0000945!2.17e-28!8;UBERON:0010039!2.17e-28!8;UBERON:0005057!4.19e-24!26;UBERON:0000974!4.42e-23!10;UBERON:0003408!4.42e-23!10;UBERON:0001042!4.42e-23!10;UBERON:0009145!4.42e-23!10;UBERON:0006562!4.65e-21!11;UBERON:0009722!4.65e-21!11;UBERON:0007690!4.65e-21!11;UBERON:0008814!1.18e-15!15;UBERON:0001557!1.64e-12!19;UBERON:0004457!3.01e-09!12;UBERON:0000042!3.01e-09!12;UBERON:0001041!3.18e-09!98;UBERON:0004807!1.05e-08!28;UBERON:0002368!4.39e-07!35;UBERON:0000077!5.93e-07!130;UBERON:0004921!5.93e-07!129;UBERON:0004185!5.93e-07!129;UBERON:0005409!7.52e-07!35 | |ontology_enrichment_uberon=UBERON:0004177!4.27e-88!7;UBERON:0002370!2.60e-56!4;UBERON:0005058!2.60e-56!4;UBERON:0009113!2.60e-56!4;UBERON:0003295!2.60e-56!4;UBERON:0005562!2.60e-56!4;UBERON:0003351!7.14e-38!6;UBERON:0002106!7.70e-34!3;UBERON:0004854!7.70e-34!3;UBERON:0009034!7.70e-34!3;UBERON:0002095!7.70e-34!3;UBERON:0004782!7.70e-34!3;UBERON:0003281!7.70e-34!3;UBERON:0009664!7.70e-34!3;UBERON:0002296!7.70e-34!3;UBERON:0005602!7.70e-34!3;UBERON:0001179!7.70e-34!3;UBERON:0006293!7.70e-34!3;UBERON:0000945!2.17e-28!8;UBERON:0010039!2.17e-28!8;UBERON:0005057!4.19e-24!26;UBERON:0000974!4.42e-23!10;UBERON:0003408!4.42e-23!10;UBERON:0001042!4.42e-23!10;UBERON:0009145!4.42e-23!10;UBERON:0006562!4.65e-21!11;UBERON:0009722!4.65e-21!11;UBERON:0007690!4.65e-21!11;UBERON:0008814!1.18e-15!15;UBERON:0001557!1.64e-12!19;UBERON:0004457!3.01e-09!12;UBERON:0000042!3.01e-09!12;UBERON:0001041!3.18e-09!98;UBERON:0004807!1.05e-08!28;UBERON:0002368!4.39e-07!35;UBERON:0000077!5.93e-07!130;UBERON:0004921!5.93e-07!129;UBERON:0004185!5.93e-07!129;UBERON:0005409!7.52e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0004177;1.81e-40;5!UBERON:0005057;1.81e-40;5!UBERON:0002370;4.90e-26;2!UBERON:0005058;4.90e-26;2!UBERON:0009113;4.90e-26;2!UBERON:0002106;7.35e-18;3!UBERON:0000077;1.98e-08;27!UBERON:0002405;1.98e-08;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,6.87e-64,7;UBERON:0005057,6.87e-64,7;UBERON:0002370,4.00e-50,4;UBERON:0005058,4.00e-50,4;UBERON:0009113,4.00e-50,4;UBERON:0003295,4.00e-50,4;UBERON:0005562,4.00e-50,4;UBERON:0003351,7.07e-34,6;UBERON:0000974,7.73e-21,10;UBERON:0003408,7.73e-21,10;UBERON:0001042,7.73e-21,10;UBERON:0009145,7.73e-21,10;UBERON:0006562,4.69e-19,11;UBERON:0009722,4.69e-19,11;UBERON:0007690,4.69e-19,11;UBERON:0002106,8.00e-18,3;UBERON:0004854,8.00e-18,3;UBERON:0009034,8.00e-18,3;UBERON:0002095,8.00e-18,3;UBERON:0004782,8.00e-18,3;UBERON:0003281,8.00e-18,3;UBERON:0009664,8.00e-18,3;UBERON:0002296,8.00e-18,3;UBERON:0005602,8.00e-18,3;UBERON:0001179,8.00e-18,3;UBERON:0006293,8.00e-18,3;UBERON:0000077,2.82e-16,29;UBERON:0008814,4.31e-12,18;UBERON:0001557,1.63e-11,19;UBERON:0004807,3.78e-08,28;UBERON:0000945,1.59e-07,8;UBERON:0010039,1.59e-07,8 | |||
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|short_description=p@chr2:95715295..95715305,+ | |short_description=p@chr2:95715295..95715305,+ | ||
}} | }} |
Latest revision as of 13:11, 29 July 2015
Short description: | p@chr2:95715295..95715305, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:95715295..95715305, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 3.99e-50 | 1 |
immature NK T cell | 3.99e-50 | 1 |
effector T cell | 3.99e-50 | 1 |
mature NK T cell | 3.99e-50 | 1 |
immature NK T cell stage IV | 3.99e-50 | 1 |
immature NK T cell stage I | 3.99e-50 | 1 |
immature NK T cell stage II | 3.99e-50 | 1 |
immature NK T cell stage III | 3.99e-50 | 1 |
thymocyte | 7.14e-26 | 2 |
double negative thymocyte | 7.14e-26 | 2 |
double-positive, alpha-beta thymocyte | 7.14e-26 | 2 |
DN4 thymocyte | 7.14e-26 | 2 |
DN1 thymic pro-T cell | 7.14e-26 | 2 |
DN2 thymocyte | 7.14e-26 | 2 |
DN3 thymocyte | 7.14e-26 | 2 |
immature single positive thymocyte | 7.14e-26 | 2 |
early T lineage precursor | 7.14e-26 | 2 |
T cell | 5.95e-09 | 25 |
pro-T cell | 5.95e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 6.87e-64 | 7 |
immune organ | 6.87e-64 | 7 |
thymus | 4.00e-50 | 4 |
hemolymphoid system gland | 4.00e-50 | 4 |
thymic region | 4.00e-50 | 4 |
pharyngeal gland | 4.00e-50 | 4 |
thymus primordium | 4.00e-50 | 4 |
pharyngeal epithelium | 7.07e-34 | 6 |
neck | 7.73e-21 | 10 |
gland of gut | 7.73e-21 | 10 |
chordate pharynx | 7.73e-21 | 10 |
pharyngeal region of foregut | 7.73e-21 | 10 |
pharynx | 4.69e-19 | 11 |
entire pharyngeal arch endoderm | 4.69e-19 | 11 |
early pharyngeal endoderm | 4.69e-19 | 11 |
spleen | 8.00e-18 | 3 |
gastrointestinal system mesentery | 8.00e-18 | 3 |
stomach region | 8.00e-18 | 3 |
mesentery | 8.00e-18 | 3 |
gastrointestinal system serosa | 8.00e-18 | 3 |
mesentery of stomach | 8.00e-18 | 3 |
gut mesentery | 8.00e-18 | 3 |
dorsal mesentery | 8.00e-18 | 3 |
dorsal mesogastrium | 8.00e-18 | 3 |
peritoneal cavity | 8.00e-18 | 3 |
spleen primordium | 8.00e-18 | 3 |
mixed endoderm/mesoderm-derived structure | 2.82e-16 | 29 |
pharyngeal arch system | 4.31e-12 | 18 |
upper respiratory tract | 1.63e-11 | 19 |
respiratory system epithelium | 3.78e-08 | 28 |
stomach | 1.59e-07 | 8 |
food storage organ | 1.59e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 9.44e-21 | 10 |
hematologic cancer | 1.28e-09 | 51 |
immune system cancer | 1.28e-09 | 51 |