FFCP PHASE1:Hg19::chr3:104628747..104628762,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:104628747..104628762,- | |||
|coexpression_cluster_id=C4257 | |||
|description=CAGE_peak_at_chr3:104628747..104628762,- | |description=CAGE_peak_at_chr3:104628747..104628762,- | ||
|id=chr3:104628747..104628762,- | |id=chr3:104628747..104628762,- | ||
|ontology_enrichment_celltype=CL:0002139!7.87e-32!24;CL:0000071!5.22e-26!18;CL:0002546!5.22e-26!18;CL:0000222!8.70e-26!119;CL:0000115!3.52e-25!35;CL:0002078!8.68e-20!44;CL:0000213!5.01e-17!57;CL:0000215!5.01e-17!57;CL:1000413!1.45e-15!9;CL:0000055!1.72e-11!180;CL:0000680!4.09e-11!57;CL:0000056!4.09e-11!57;CL:0000355!4.09e-11!57;CL:0002544!6.28e-11!6;CL:0002543!6.28e-11!6;CL:0000183!3.53e-10!59;CL:0000220!9.32e-09!246;CL:0000187!1.09e-08!54;CL:0002551!1.41e-08!6;CL:0002321!1.47e-08!248;CL:0002371!9.52e-08!591;CL:0005020!1.77e-07!6;CL:0002138!1.77e-07!6;CL:0005022!1.77e-07!6;CL:0000192!2.02e-07!42;CL:0000514!2.02e-07!42;CL:0000393!3.21e-07!60;CL:0000211!3.21e-07!60;CL:0000548!5.61e-07!679;CL:0000004!5.61e-07!679;CL:0000255!5.61e-07!679;CL:0000144!6.63e-07!625;CL:0000012!8.36e-07!682 | |ontology_enrichment_celltype=CL:0002139!7.87e-32!24;CL:0000071!5.22e-26!18;CL:0002546!5.22e-26!18;CL:0000222!8.70e-26!119;CL:0000115!3.52e-25!35;CL:0002078!8.68e-20!44;CL:0000213!5.01e-17!57;CL:0000215!5.01e-17!57;CL:1000413!1.45e-15!9;CL:0000055!1.72e-11!180;CL:0000680!4.09e-11!57;CL:0000056!4.09e-11!57;CL:0000355!4.09e-11!57;CL:0002544!6.28e-11!6;CL:0002543!6.28e-11!6;CL:0000183!3.53e-10!59;CL:0000220!9.32e-09!246;CL:0000187!1.09e-08!54;CL:0002551!1.41e-08!6;CL:0002321!1.47e-08!248;CL:0002371!9.52e-08!591;CL:0005020!1.77e-07!6;CL:0002138!1.77e-07!6;CL:0005022!1.77e-07!6;CL:0000192!2.02e-07!42;CL:0000514!2.02e-07!42;CL:0000393!3.21e-07!60;CL:0000211!3.21e-07!60;CL:0000548!5.61e-07!679;CL:0000004!5.61e-07!679;CL:0000255!5.61e-07!679;CL:0000144!6.63e-07!625;CL:0000012!8.36e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.51e-90;24!CL:0000071;2.16e-79;18!CL:0000115;5.61e-59;36!CL:1000413;2.76e-45;9!CL:0002078;4.08e-36;45!CL:0002543;7.53e-31;6!CL:0002544;9.25e-31;6!CL:0000213;4.40e-29;58!CL:0000215;4.40e-29;58!CL:0002618;2.03e-16;3!CL:0000515;2.01e-15;3!CL:0000076;1.24e-14;63!CL:0002138;3.66e-14;6!CL:0002545;5.63e-12;2!CL:0000056;1.06e-11;4!CL:0002144;9.38e-08;3!CL:0000680;7.02e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.16e-90,24;CL:0000071,1.34e-79,18;CL:0002546,1.34e-79,18;CL:0000115,4.26e-71,36;CL:0002078,7.88e-56,45;CL:0000213,5.12e-46,58;CL:0000215,5.12e-46,58;CL:1000413,1.88e-45,9;CL:0002544,7.55e-31,6;CL:0002543,7.55e-31,6;CL:0000222,2.47e-29,121;CL:0000076,1.66e-22,63;CL:0002618,1.84e-16,3;CL:0005020,4.19e-14,6;CL:0002138,4.19e-14,6;CL:0005022,4.19e-14,6;CL:0002545,5.64e-12,2;CL:0002321,7.84e-12,250;CL:0000515,1.15e-11,4;CL:0000066,6.74e-09,253;CL:0002144,8.63e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002546;2.16e-79;18!CL:0005022;3.66e-14;6!CL:0000515;1.06e-11;4!CL:0000222;2.63e-10;121 | |||
|ontology_enrichment_disease=DOID:2394!2.27e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!5.22e-26!18;UBERON:0004638!5.22e-26!18;UBERON:0004852!5.22e-26!18;UBERON:0000055!3.28e-25!69;UBERON:0002049!7.60e-23!79;UBERON:0007798!7.60e-23!79;UBERON:0001981!9.94e-22!60;UBERON:0007500!9.94e-22!60;UBERON:0004537!9.94e-22!60;UBERON:0006965!9.94e-22!60;UBERON:0000487!3.56e-20!22;UBERON:0006914!4.93e-19!25;UBERON:0001637!6.88e-17!42;UBERON:0003509!6.88e-17!42;UBERON:0004572!6.88e-17!42;UBERON:0004872!2.75e-16!84;UBERON:0004535!3.14e-16!110;UBERON:0003915!1.45e-15!9;UBERON:0004700!1.45e-15!9;UBERON:0001917!1.45e-15!9;UBERON:0001009!1.93e-15!113;UBERON:0000490!9.22e-14!138;UBERON:0004290!2.67e-13!70;UBERON:0003914!5.50e-13!118;UBERON:0000914!2.17e-12!83;UBERON:0002329!2.17e-12!83;UBERON:0003077!2.17e-12!83;UBERON:0003059!2.17e-12!83;UBERON:0007282!2.17e-12!83;UBERON:0009618!2.17e-12!83;UBERON:0007285!2.17e-12!83;UBERON:0000486!7.27e-11!82;UBERON:0001134!6.64e-10!61;UBERON:0002036!6.64e-10!61;UBERON:0003082!6.64e-10!61;UBERON:0004573!1.39e-09!33;UBERON:0004571!1.39e-09!33;UBERON:0002385!2.32e-09!63;UBERON:0001015!2.32e-09!63;UBERON:0000383!2.32e-09!63;UBERON:0001638!1.14e-08!9;UBERON:0003920!1.14e-08!9;UBERON:0004582!1.14e-08!9;UBERON:0000119!1.76e-08!312;UBERON:0000483!6.86e-08!309;UBERON:0002118!8.39e-08!5;UBERON:0004532!8.39e-08!5;UBERON:0000947!4.24e-07!21;UBERON:0010191!4.24e-07!21;UBERON:0005256!8.28e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.16e-79;18!UBERON:0001986;2.16e-79;18!UBERON:0004852;2.16e-79;18!UBERON:0000487;2.95e-64;22!UBERON:0006914;4.42e-56;25!UBERON:0003915;2.76e-45;9!UBERON:0004700;2.76e-45;9!UBERON:0001917;2.76e-45;9!UBERON:0000490;3.87e-38;33!UBERON:0001638;2.19e-20;9!UBERON:0003920;2.19e-20;9!UBERON:0004582;2.19e-20;9!UBERON:0000055;2.35e-18;65!UBERON:0007500;1.63e-17;56!UBERON:0001981;1.63e-17;56!UBERON:0004537;1.63e-17;56!UBERON:0002049;7.40e-14;75!UBERON:0007798;7.40e-14;75!UBERON:0001637;2.75e-12;42!UBERON:0003509;2.75e-12;42!UBERON:0004572;2.75e-12;42!UBERON:0005800;5.63e-12;2!UBERON:0001515;5.63e-12;2!UBERON:0003914;2.89e-11;74!UBERON:0001473;1.20e-10;8!UBERON:0004536;1.20e-10;8!UBERON:0006558;1.20e-10;8!UBERON:0000025;3.36e-10;93!UBERON:0002066;4.82e-10;5!UBERON:0004573;8.86e-09;33!UBERON:0004571;8.86e-09;33!UBERON:0002465;1.57e-08;10!UBERON:0001009;1.78e-08;112!UBERON:0000947;2.30e-08;21!UBERON:0010191;2.30e-08;21!UBERON:0010523;9.38e-08;3!UBERON:0001915;9.38e-08;3!UBERON:0001982;9.38e-08;3!UBERON:0004535;9.58e-08;109 | |||
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|short_description=p@chr3:104628747..104628762,- | |short_description=p@chr3:104628747..104628762,- | ||
}} | }} |
Latest revision as of 13:54, 29 July 2015
Short description: | p@chr3:104628747..104628762, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:104628747..104628762, - |
Coexpression cluster: | C4257_Endothelial_basal_Smooth_bone_Renal_mesenchymal_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.16e-90 | 24 |
blood vessel endothelial cell | 1.34e-79 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.34e-79 | 18 |
endothelial cell | 4.26e-71 | 36 |
meso-epithelial cell | 7.88e-56 | 45 |
lining cell | 5.12e-46 | 58 |
barrier cell | 5.12e-46 | 58 |
endothelial cell of artery | 1.88e-45 | 9 |
aortic endothelial cell | 7.55e-31 | 6 |
vein endothelial cell | 7.55e-31 | 6 |
mesodermal cell | 2.47e-29 | 121 |
squamous epithelial cell | 1.66e-22 | 63 |
endothelial cell of umbilical vein | 1.84e-16 | 3 |
lymphangioblast | 4.19e-14 | 6 |
endothelial cell of lymphatic vessel | 4.19e-14 | 6 |
vascular lymphangioblast | 4.19e-14 | 6 |
thoracic aorta endothelial cell | 5.64e-12 | 2 |
embryonic cell | 7.84e-12 | 250 |
skeletal muscle myoblast | 1.15e-11 | 4 |
epithelial cell | 6.74e-09 | 253 |
capillary endothelial cell | 8.63e-08 | 3 |