FFCP PHASE1:Hg19::chr3:127610096..127610119,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:127610096..127610119,+ | |||
|coexpression_cluster_id=C818 | |coexpression_cluster_id=C818 | ||
|description=CAGE_peak_at_chr3:127610096..127610119,+ | |description=CAGE_peak_at_chr3:127610096..127610119,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000080!1.33e-13!6;CL:0000946!9.70e-10!1;CL:0000786!9.70e-10!1;CL:0000980!9.70e-10!1;CL:0000838!3.13e-09!52;CL:0000542!4.89e-09!53;CL:0000051!4.89e-09!53 | |ontology_enrichment_celltype=CL:0000080!1.33e-13!6;CL:0000946!9.70e-10!1;CL:0000786!9.70e-10!1;CL:0000980!9.70e-10!1;CL:0000838!3.13e-09!52;CL:0000542!4.89e-09!53;CL:0000051!4.89e-09!53 | ||
|ontology_enrichment_celltype_v019=CL:0000084;5.84e-11;25 | |ontology_enrichment_celltype_v019=CL:0000084;5.84e-11;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,5.84e-11,25;CL:0000827,5.84e-11,25 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.74e-15;2 | |ontology_enrichment_development_v019=UBERON:0010122;2.74e-15;2 | ||
|ontology_enrichment_disease=DOID:2355!1.62e-09!1;DOID:0060058!3.30e-08!10 | |ontology_enrichment_disease=DOID:2355!1.62e-09!1;DOID:0060058!3.30e-08!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;2.51e-12;10 | |ontology_enrichment_disease_v019=DOID:0060058;2.51e-12;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.51e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0000369!2.44e-19!4;UBERON:0002435!2.44e-19!4;UBERON:0000204!2.44e-19!4;UBERON:0010082!2.44e-19!4;UBERON:0002420!5.54e-15!9;UBERON:0007245!5.54e-15!9;UBERON:0010009!5.54e-15!9;UBERON:0010011!5.54e-15!9;UBERON:0000454!5.54e-15!9;UBERON:0005383!2.40e-12!3;UBERON:0005382!2.40e-12!3;UBERON:0009663!2.67e-11!7;UBERON:0001874!7.50e-10!1;UBERON:0002372!2.46e-09!1;UBERON:0001961!2.46e-09!1;UBERON:0001744!2.46e-09!1;UBERON:0001735!2.46e-09!1;UBERON:0001882!2.67e-09!1;UBERON:0005403!2.67e-09!1;UBERON:0002308!6.68e-09!9;UBERON:0000125!6.68e-09!9;UBERON:0002331!2.33e-08!10;UBERON:0000358!2.33e-08!10;UBERON:0000307!2.33e-08!10;UBERON:0000091!2.33e-08!10;UBERON:0000087!2.33e-08!10;UBERON:0007806!2.33e-08!10;UBERON:0008780!2.33e-08!10;UBERON:0005728!2.33e-08!10;UBERON:0000349!2.16e-07!5 | |ontology_enrichment_uberon=UBERON:0000369!2.44e-19!4;UBERON:0002435!2.44e-19!4;UBERON:0000204!2.44e-19!4;UBERON:0010082!2.44e-19!4;UBERON:0002420!5.54e-15!9;UBERON:0007245!5.54e-15!9;UBERON:0010009!5.54e-15!9;UBERON:0010011!5.54e-15!9;UBERON:0000454!5.54e-15!9;UBERON:0005383!2.40e-12!3;UBERON:0005382!2.40e-12!3;UBERON:0009663!2.67e-11!7;UBERON:0001874!7.50e-10!1;UBERON:0002372!2.46e-09!1;UBERON:0001961!2.46e-09!1;UBERON:0001744!2.46e-09!1;UBERON:0001735!2.46e-09!1;UBERON:0001882!2.67e-09!1;UBERON:0005403!2.67e-09!1;UBERON:0002308!6.68e-09!9;UBERON:0000125!6.68e-09!9;UBERON:0002331!2.33e-08!10;UBERON:0000358!2.33e-08!10;UBERON:0000307!2.33e-08!10;UBERON:0000091!2.33e-08!10;UBERON:0000087!2.33e-08!10;UBERON:0007806!2.33e-08!10;UBERON:0008780!2.33e-08!10;UBERON:0005728!2.33e-08!10;UBERON:0000349!2.16e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.28e-26;10!UBERON:0000178;1.10e-17;15!UBERON:0000179;1.10e-17;15!UBERON:0000463;1.10e-17;15!UBERON:0001873;2.74e-15;2!UBERON:0000478;2.43e-11;24!UBERON:0005383;1.20e-10;3!UBERON:0005382;1.20e-10;3!UBERON:0002390;9.25e-09;32!UBERON:0000369;2.61e-08;4!UBERON:0002435;2.61e-08;4!UBERON:0000204;2.61e-08;4 | |ontology_enrichment_uberon_v019=UBERON:0002331;4.28e-26;10!UBERON:0000178;1.10e-17;15!UBERON:0000179;1.10e-17;15!UBERON:0000463;1.10e-17;15!UBERON:0001873;2.74e-15;2!UBERON:0000478;2.43e-11;24!UBERON:0005383;1.20e-10;3!UBERON:0005382;1.20e-10;3!UBERON:0002390;9.25e-09;32!UBERON:0000369;2.61e-08;4!UBERON:0002435;2.61e-08;4!UBERON:0000204;2.61e-08;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.28e-26,10;UBERON:0000358,4.28e-26,10;UBERON:0000307,4.28e-26,10;UBERON:0000091,4.28e-26,10;UBERON:0000087,4.28e-26,10;UBERON:0007010,4.28e-26,10;UBERON:0007806,4.28e-26,10;UBERON:0008780,4.28e-26,10;UBERON:0005728,4.28e-26,10;UBERON:0000178,1.10e-17,15;UBERON:0000179,1.10e-17,15;UBERON:0000463,1.10e-17,15;UBERON:0001873,2.74e-15,2;UBERON:0010122,2.74e-15,2;UBERON:0000478,2.43e-11,24;UBERON:0005383,1.20e-10,3;UBERON:0005382,1.20e-10,3;UBERON:0000369,2.61e-08,4;UBERON:0002435,2.61e-08,4;UBERON:0000204,2.61e-08,4;UBERON:0010082,2.61e-08,4 | |||
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|short_description=p@chr3:127610096..127610119,+ | |short_description=p@chr3:127610096..127610119,+ | ||
}} | }} |
Latest revision as of 15:29, 29 July 2015
Short description: | p@chr3:127610096..127610119, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:127610096..127610119, + |
Coexpression cluster: | C818_adult_cord_hairy_anaplastic_mycosis_CD4_non |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 5.84e-11 | 25 |
pro-T cell | 5.84e-11 | 25 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 4.28e-26 | 10 |
blastocyst | 4.28e-26 | 10 |
blastula | 4.28e-26 | 10 |
bilaminar disc | 4.28e-26 | 10 |
inner cell mass | 4.28e-26 | 10 |
cleaving embryo | 4.28e-26 | 10 |
connecting stalk | 4.28e-26 | 10 |
inner cell mass derived epiblast | 4.28e-26 | 10 |
extraembryonic mesoderm | 4.28e-26 | 10 |
blood | 1.10e-17 | 15 |
haemolymphatic fluid | 1.10e-17 | 15 |
organism substance | 1.10e-17 | 15 |
caudate nucleus | 2.74e-15 | 2 |
future caudate nucleus | 2.74e-15 | 2 |
extraembryonic structure | 2.43e-11 | 24 |
caudate-putamen | 1.20e-10 | 3 |
dorsal striatum | 1.20e-10 | 3 |
corpus striatum | 2.61e-08 | 4 |
striatum | 2.61e-08 | 4 |
ventral part of telencephalon | 2.61e-08 | 4 |
future corpus striatum | 2.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.51e-12 | 10 |