FFCP PHASE1:Hg19::chr3:132976005..132976010,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_ENST00000505721_5end | |association_with_transcript=21bp_to_ENST00000505721_5end | ||
|cluster_id=chr3:132976005..132976010,- | |||
|coexpression_cluster_id=C1250 | |coexpression_cluster_id=C1250 | ||
|description=CAGE_peak_2_at_ENST00000505721_5end | |description=CAGE_peak_2_at_ENST00000505721_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000342!7.50e-10!1;CL:0002565!7.50e-10!1;CL:0000077!2.50e-07!19 | |ontology_enrichment_celltype=CL:0000342!7.50e-10!1;CL:0002565!7.50e-10!1;CL:0000077!2.50e-07!19 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005795;2.40e-36;10 | |ontology_enrichment_development_v019=UBERON:0005795;2.40e-36;10 | ||
|ontology_enrichment_disease=DOID:0060084!8.05e-27!3;DOID:127!8.05e-27!3;DOID:0060072!2.81e-20!4 | |ontology_enrichment_disease=DOID:0060084!8.05e-27!3;DOID:127!8.05e-27!3;DOID:0060072!2.81e-20!4 | ||
|ontology_enrichment_disease_v019=DOID:0060084;2.33e-118;3!DOID:127;2.33e-118;3!DOID:0060072;4.23e-89;4 | |ontology_enrichment_disease_v019=DOID:0060084;2.33e-118;3!DOID:127;2.33e-118;3!DOID:0060072;4.23e-89;4 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.33e-118,3;DOID:127,2.33e-118,3;DOID:0060072,4.23e-89,4 | |||
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|short_description=p2@ENST00000505721 | |short_description=p2@ENST00000505721 | ||
}} | }} |
Latest revision as of 15:56, 29 July 2015
Short description: | p2@ENST00000505721 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000505721_5end |
Coexpression cluster: | C1250_leiomyoma_Mesenchymal_Olfactory_amygdala_carcinoid_fibrosarcoma_mesothelioma |
Association with transcript: | 21bp_to_ENST00000505721_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amygdala | 1.16e-78 | 2 |
limbic system | 2.74e-32 | 5 |
temporal lobe | 2.02e-23 | 6 |
basal ganglion | 1.76e-18 | 9 |
nuclear complex of neuraxis | 1.76e-18 | 9 |
aggregate regional part of brain | 1.76e-18 | 9 |
collection of basal ganglia | 1.76e-18 | 9 |
cerebral subcortex | 1.76e-18 | 9 |
uterus | 7.83e-18 | 21 |
embryonic uterus | 4.60e-17 | 22 |
internal female genitalia | 4.60e-17 | 22 |
internal genitalia | 3.99e-15 | 25 |
female reproductive organ | 1.71e-10 | 37 |
female reproductive system | 1.71e-10 | 37 |
female organism | 1.51e-09 | 41 |
neocortex | 1.59e-08 | 20 |
reproductive organ | 2.89e-08 | 48 |
regional part of cerebral cortex | 7.23e-08 | 22 |
cerebral cortex | 4.55e-07 | 25 |
pallium | 4.55e-07 | 25 |
reproductive structure | 7.38e-07 | 59 |
reproductive system | 7.38e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.33e-118 | 3 |
leiomyoma | 2.33e-118 | 3 |
benign neoplasm | 4.23e-89 | 4 |