FFCP PHASE1:Hg19::chr3:154796862..154796880,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:154796862..154796880,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_at_chr3:154796862..154796880,+ | |description=CAGE_peak_at_chr3:154796862..154796880,+ | ||
|id=chr3:154796862..154796880,+ | |id=chr3:154796862..154796880,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.02e-14!180;CL:0000057!4.11e-11!75;CL:0002620!8.97e-11!23 | |ontology_enrichment_celltype=CL:0000055!1.02e-14!180;CL:0000057!4.11e-11!75;CL:0002620!8.97e-11!23 | ||
|ontology_enrichment_celltype_v019=CL:0000817;1.17e-08;1!CL:0002552;9.17e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,9.45e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.27e-16;2!UBERON:0006222;1.17e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;9.17e-07;5!DOID:450;9.17e-07;5!DOID:66;9.17e-07;5!DOID:423;9.17e-07;5!DOID:0080000;9.17e-07;5!DOID:11722;9.17e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,9.73e-07,5;DOID:450,9.73e-07,5;DOID:66,9.73e-07,5;DOID:423,9.73e-07,5;DOID:0080000,9.73e-07,5;DOID:11722,9.73e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0009663!4.71e-10!7;UBERON:0000914!9.54e-09!83;UBERON:0002329!9.54e-09!83;UBERON:0003077!9.54e-09!83;UBERON:0003059!9.54e-09!83;UBERON:0007282!9.54e-09!83;UBERON:0009618!9.54e-09!83;UBERON:0007285!9.54e-09!83;UBERON:0004290!1.33e-07!70;UBERON:0002385!1.39e-07!63;UBERON:0001015!1.39e-07!63;UBERON:0000383!1.39e-07!63;UBERON:0002308!2.01e-07!9;UBERON:0002420!2.01e-07!9;UBERON:0000125!2.01e-07!9;UBERON:0007245!2.01e-07!9;UBERON:0010009!2.01e-07!9;UBERON:0010011!2.01e-07!9;UBERON:0000454!2.01e-07!9;UBERON:0000475!4.89e-07!365;UBERON:0000369!7.60e-07!4;UBERON:0002435!7.60e-07!4;UBERON:0000204!7.60e-07!4;UBERON:0010082!7.60e-07!4;UBERON:0002097!8.36e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0009663;1.42e-27;7!UBERON:0005383;7.25e-24;3!UBERON:0005382;7.25e-24;3!UBERON:0002420;2.00e-21;9!UBERON:0000125;2.00e-21;9!UBERON:0007245;2.00e-21;9!UBERON:0002308;2.00e-21;9!UBERON:0010009;2.00e-21;9!UBERON:0010011;2.00e-21;9!UBERON:0000454;2.00e-21;9!UBERON:0000369;4.71e-18;4!UBERON:0002435;4.71e-18;4!UBERON:0000204;4.71e-18;4!UBERON:0001873;1.27e-16;2!UBERON:0001875;1.42e-16;2!UBERON:0006514;1.42e-16;2!UBERON:0001874;5.27e-09;1!UBERON:0002426;1.17e-08;1!UBERON:0003831;1.17e-08;1!UBERON:0003898;1.17e-08;1!UBERON:0004830;1.17e-08;1!UBERON:0003830;1.17e-08;1!UBERON:0005175;1.17e-08;1!UBERON:0001774;1.17e-08;1!UBERON:0001103;1.17e-08;1!UBERON:0002780;6.91e-07;41!UBERON:0001890;6.91e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009663,1.55e-27,7;UBERON:0005383,7.29e-24,3;UBERON:0005382,7.29e-24,3;UBERON:0002420,2.14e-21,9;UBERON:0000125,2.14e-21,9;UBERON:0007245,2.14e-21,9;UBERON:0002308,2.14e-21,9;UBERON:0010009,2.14e-21,9;UBERON:0010011,2.14e-21,9;UBERON:0000454,2.14e-21,9;UBERON:0000369,4.73e-18,4;UBERON:0002435,4.73e-18,4;UBERON:0000204,4.73e-18,4;UBERON:0010082,4.73e-18,4;UBERON:0001873,1.27e-16,2;UBERON:0010122,1.27e-16,2;UBERON:0001875,1.60e-16,2;UBERON:0006514,1.60e-16,2;UBERON:0001874,5.28e-09,1;UBERON:0002426,7.75e-09,1;UBERON:0003831,7.75e-09,1;UBERON:0003898,7.75e-09,1;UBERON:0004830,7.75e-09,1;UBERON:0003830,7.75e-09,1;UBERON:0005175,7.75e-09,1;UBERON:0001774,7.75e-09,1;UBERON:0001103,7.75e-09,1;UBERON:0010084,7.75e-09,1;UBERON:0002780,3.43e-08,41;UBERON:0001890,3.43e-08,41;UBERON:0003080,3.43e-08,41;UBERON:0006240,3.43e-08,41 | |||
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| ||
|short_description=p@chr3:154796862..154796880,+ | |short_description=p@chr3:154796862..154796880,+ | ||
}} | }} |
Latest revision as of 17:20, 29 July 2015
Short description: | p@chr3:154796862..154796880, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:154796862..154796880, + |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 9.45e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
telencephalic nucleus | 1.55e-27 | 7 |
caudate-putamen | 7.29e-24 | 3 |
dorsal striatum | 7.29e-24 | 3 |
basal ganglion | 2.14e-21 | 9 |
neural nucleus | 2.14e-21 | 9 |
nuclear complex of neuraxis | 2.14e-21 | 9 |
nucleus of brain | 2.14e-21 | 9 |
aggregate regional part of brain | 2.14e-21 | 9 |
collection of basal ganglia | 2.14e-21 | 9 |
cerebral subcortex | 2.14e-21 | 9 |
corpus striatum | 4.73e-18 | 4 |
striatum | 4.73e-18 | 4 |
ventral part of telencephalon | 4.73e-18 | 4 |
future corpus striatum | 4.73e-18 | 4 |
caudate nucleus | 1.27e-16 | 2 |
future caudate nucleus | 1.27e-16 | 2 |
globus pallidus | 1.60e-16 | 2 |
pallidum | 1.60e-16 | 2 |
putamen | 5.28e-09 | 1 |
chest muscle | 7.75e-09 | 1 |
respiratory system muscle | 7.75e-09 | 1 |
skeletal muscle of trunk | 7.75e-09 | 1 |
respiratory system skeletal muscle | 7.75e-09 | 1 |
thoracic segment muscle | 7.75e-09 | 1 |
chest organ | 7.75e-09 | 1 |
muscle of trunk | 7.75e-09 | 1 |
diaphragm | 7.75e-09 | 1 |
future diaphragm | 7.75e-09 | 1 |
regional part of forebrain | 3.43e-08 | 41 |
forebrain | 3.43e-08 | 41 |
anterior neural tube | 3.43e-08 | 41 |
future forebrain | 3.43e-08 | 41 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.73e-07 | 5 |
myotonic disease | 9.73e-07 | 5 |
muscle tissue disease | 9.73e-07 | 5 |
myopathy | 9.73e-07 | 5 |
muscular disease | 9.73e-07 | 5 |
myotonic dystrophy | 9.73e-07 | 5 |