FFCP PHASE1:Hg19::chr3:194214959..194214968,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:194214959..194214968,- | |||
|description=CAGE_peak_at_chr3:194214959..194214968,- | |description=CAGE_peak_at_chr3:194214959..194214968,- | ||
|id=chr3:194214959..194214968,- | |id=chr3:194214959..194214968,- | ||
|ontology_enrichment_celltype=CL:0002541!9.32e-09!3;CL:0000197!2.70e-07!6;CL:0000098!2.70e-07!6;CL:0002167!2.70e-07!6 | |ontology_enrichment_celltype=CL:0002541!9.32e-09!3;CL:0000197!2.70e-07!6;CL:0000098!2.70e-07!6;CL:0002167!2.70e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000511;1.48e-40;1!CL:0002625;1.48e-40;1!CL:0000216;1.48e-40;1!CL:0002541;1.60e-14;3!CL:0000349;2.26e-09;19!CL:0002595;2.97e-09;5!CL:0000154;6.33e-08;6!CL:0002569;6.33e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,6.62e-41,1;CL:0002625,6.62e-41,1;CL:0000216,6.62e-41,1;CL:0002541,1.83e-14,3;CL:0000349,2.26e-09,19;CL:0002595,2.97e-09,5;CL:0000154,5.54e-08,6;CL:0002569,5.92e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.48e-40;1!UBERON:0004872;5.70e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!9.32e-09!3;UBERON:0000920!9.32e-09!3 | |ontology_enrichment_uberon=UBERON:0000476!9.32e-09!3;UBERON:0000920!9.32e-09!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.48e-40;1!UBERON:0001343;1.48e-40;1!UBERON:0004910;1.48e-40;1!UBERON:0004813;1.48e-40;1!UBERON:0004909;4.66e-21;2!UBERON:0000478;1.18e-15;24!UBERON:0003124;1.60e-14;3!UBERON:0000920;1.60e-14;3!UBERON:0001987;3.10e-11;4!UBERON:0005904;3.10e-11;4!UBERON:0003834;2.97e-09;5!UBERON:0001533;2.97e-09;5!UBERON:0003422;6.33e-08;6!UBERON:0003104;5.70e-07;7!UBERON:0003513;5.70e-07;7!UBERON:0009142;5.70e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,6.62e-41,1;UBERON:0001343,6.62e-41,1;UBERON:0004910,6.62e-41,1;UBERON:0005154,6.62e-41,1;UBERON:0005295,6.62e-41,1;UBERON:0004813,6.62e-41,1;UBERON:0005297,6.62e-41,1;UBERON:0005294,6.62e-41,1;UBERON:0010141,6.62e-41,1;UBERON:0005891,6.62e-41,1;UBERON:0003124,2.02e-23,7;UBERON:0004909,3.11e-21,2;UBERON:0000478,1.31e-15,24;UBERON:0000920,1.83e-14,3;UBERON:0005631,2.82e-12,14;UBERON:0000158,2.82e-12,14;UBERON:0005904,2.53e-11,4;UBERON:0001987,3.79e-11,4;UBERON:0004340,3.79e-11,4;UBERON:0003834,2.97e-09,5;UBERON:0001533,2.97e-09,5;UBERON:0003422,5.92e-08,6;UBERON:0003513,5.70e-07,7 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.132409180813219,0.286836620748814,0,0,0,0,0.622422070799533,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0.718874566474748,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.415941723061614,0.178428988797162,0.630809660135739,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0.18532421910392,0,0,0.316379424718726,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,1.10273068709225,0,0,0,0,0.405820753925408,0,0,0,0,0.35667105148125,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.230850775511391,0.113942055847001,0,0,0,0.31900115973192,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.219267951258557,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0.363697318405119,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0.606965604236632,0,1.06442844195167,0,0.171488009437418,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 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|phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.132409180813219,0.286836620748814,0,0,0,0,0.622422070799533,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0.718874566474748,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.415941723061614,0.178428988797162,0.630809660135739,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0.18532421910392,0,0,0.316379424718726,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,1.10273068709225,0,0,0,0,0.405820753925408,0,0,0,0,0.35667105148125,0,0,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.230850775511391,0.113942055847001,0,0,0,0.31900115973192,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.219267951258557,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0.363697318405119,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0.606965604236632,0,1.06442844195167,0,0.171488009437418,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p@chr3:194214959..194214968,- | |short_description=p@chr3:194214959..194214968,- | ||
}} | }} |
Latest revision as of 19:38, 29 July 2015
Short description: | p@chr3:194214959..194214968, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:194214959..194214968, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 6.62e-41 | 1 |
seminiferous tubule epithelial cell | 6.62e-41 | 1 |
Sertoli cell | 6.62e-41 | 1 |
chorionic membrane mesenchymal stem cell | 1.83e-14 | 3 |
extraembryonic cell | 2.26e-09 | 19 |
smooth muscle cell of the subclavian artery | 2.97e-09 | 5 |
protein secreting cell | 5.54e-08 | 6 |
mesenchymal stem cell of umbilical cord | 5.92e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 6.62e-41 | 1 |
seminiferous tubule of testis | 6.62e-41 | 1 |
epithelium of male gonad | 6.62e-41 | 1 |
epithelial cord | 6.62e-41 | 1 |
sex cord | 6.62e-41 | 1 |
seminiferous tubule epithelium | 6.62e-41 | 1 |
testis sex cord | 6.62e-41 | 1 |
genital ridge | 6.62e-41 | 1 |
primitive sex cord of indifferent gonad | 6.62e-41 | 1 |
coelomic epithelium | 6.62e-41 | 1 |
chorion | 2.02e-23 | 7 |
epithelium of gonad | 3.11e-21 | 2 |
extraembryonic structure | 1.31e-15 | 24 |
egg chorion | 1.83e-14 | 3 |
extraembryonic membrane | 2.82e-12 | 14 |
membranous layer | 2.82e-12 | 14 |
duct of male reproductive system | 2.53e-11 | 4 |
placenta | 3.79e-11 | 4 |
allantois | 3.79e-11 | 4 |
thoracic segment blood vessel | 2.97e-09 | 5 |
subclavian artery | 2.97e-09 | 5 |
mesenchyme of umbilical cord | 5.92e-08 | 6 |
trunk blood vessel | 5.70e-07 | 7 |