FFCP PHASE1:Hg19::chr3:57960725..57960736,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:57960725..57960736,- | |||
|description=CAGE_peak_at_chr3:57960725..57960736,- | |||
|id=chr3:57960725..57960736,- | |||
|ontology_enrichment_celltype=CL:0000066!6.20e-12!254 | |||
|ontology_enrichment_celltype_v019=CL:0002097;3.11e-21;2!CL:0002262;5.69e-21;2!CL:1000398;5.69e-21;2!CL:0000174;1.22e-14;3!CL:0000243;2.35e-10;15!CL:0000125;2.35e-10;15!CL:0000095;2.26e-09;17!CL:0002319;7.03e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,3.11e-21,2;CL:0002262,5.70e-21,2;CL:1000398,5.70e-21,2;CL:0000174,1.22e-14,3;CL:0000243,2.24e-10,15;CL:0000125,2.24e-10,15;CL:0000030,2.24e-10,15;CL:0000339,2.24e-10,15;CL:0000095,2.17e-09,17;CL:0000123,2.17e-09,17;CL:0002319,6.82e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.02e-15;10!UBERON:0009847;1.83e-14;3!UBERON:0003353;1.83e-14;3!CL:0000339;2.35e-10;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;3.14e-14;11!DOID:170;5.54e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,2.94e-14,11;DOID:170,5.54e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002367!1.23e-08!11;UBERON:0010147!1.23e-08!11;UBERON:0009846!1.23e-08!11;UBERON:0003353!1.23e-08!11;UBERON:0004902!1.23e-08!11;UBERON:0003820!1.23e-08!11;UBERON:0009847!1.23e-08!11;UBERON:0005153!6.55e-08!37;UBERON:0000305!7.80e-08!7;UBERON:0003937!8.05e-08!12;UBERON:0005399!8.05e-08!12;UBERON:0004871!8.59e-07!8;UBERON:0005631!9.67e-07!14;UBERON:0000158!9.67e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;5.69e-21;2!UBERON:0003497;5.69e-21;2!UBERON:0003909;5.69e-21;2!UBERON:0003835;5.69e-21;2!UBERON:0002369;1.22e-14;3!UBERON:0001235;1.22e-14;3!UBERON:0006858;1.22e-14;3!UBERON:0001280;1.83e-14;3!UBERON:0004647;1.83e-14;3!UBERON:0003513;6.04e-07;7!UBERON:0000077;7.45e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,5.70e-21,2;UBERON:0003497,5.70e-21,2;UBERON:0003909,5.70e-21,2;UBERON:0003835,5.70e-21,2;UBERON:0002369,1.22e-14,3;UBERON:0001235,1.22e-14,3;UBERON:0006858,1.22e-14,3;UBERON:0001280,1.83e-14,3;UBERON:0004647,1.83e-14,3;UBERON:0005171,1.83e-14,3;UBERON:0002394,6.78e-08,6;UBERON:0003928,6.78e-08,6;UBERON:0003513,6.04e-07,7;UBERON:0002530,8.00e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0,0,0,0.324547393654683,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.907170879989041,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0.541892875087706,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0.37064843820784,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565621727814851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146178634172371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17446729717782,1.67364554099733,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0.513260513652988,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454947352624943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0.181848659202559,0,0,0,0,0,0,0,3.27453711692416,0,0.260994291965212,0,0.231522474323834,0.244736704506468,0,0,0.438568099157414,0,0,0,0,0.690860683462397,0,0,0,0,0,0,0.491545817507439,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0.11796972334774,0.183428598521679,0,0,0,0,0,0,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0.333694205676207,1.17739639275771,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0.437119121007915,0.940634592723046,0.245148321753905,0.235676547101626,0,0,0,0,0,0,0,0,0.705789743431384,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0,0,0,0.324547393654683,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.907170879989041,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0.541892875087706,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0.37064843820784,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565621727814851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146178634172371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17446729717782,1.67364554099733,0.305994652908965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0.513260513652988,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454947352624943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0.181848659202559,0,0,0,0,0,0,0,3.27453711692416,0,0.260994291965212,0,0.231522474323834,0.244736704506468,0,0,0.438568099157414,0,0,0,0,0.690860683462397,0,0,0,0,0,0,0.491545817507439,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0.11796972334774,0.183428598521679,0,0,0,0,0,0,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0.333694205676207,1.17739639275771,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0.437119121007915,0.940634592723046,0.245148321753905,0.235676547101626,0,0,0,0,0,0,0,0,0.705789743431384,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:57960725..57960736,- | |||
}} | }} |
Latest revision as of 22:51, 29 July 2015
Short description: | p@chr3:57960725..57960736, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:57960725..57960736, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 3.11e-21 | 2 |
endothelial cell of sinusoid | 5.70e-21 | 2 |
endothelial cell of hepatic sinusoid | 5.70e-21 | 2 |
steroid hormone secreting cell | 1.22e-14 | 3 |
glial cell (sensu Vertebrata) | 2.24e-10 | 15 |
glial cell | 2.24e-10 | 15 |
glioblast | 2.24e-10 | 15 |
glioblast (sensu Vertebrata) | 2.24e-10 | 15 |
neuron associated cell | 2.17e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 2.17e-09 | 17 |
neural cell | 6.82e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 5.70e-21 | 2 |
abdomen blood vessel | 5.70e-21 | 2 |
sinusoid | 5.70e-21 | 2 |
abdominal segment blood vessel | 5.70e-21 | 2 |
adrenal gland | 1.22e-14 | 3 |
adrenal cortex | 1.22e-14 | 3 |
adrenal/interrenal gland | 1.22e-14 | 3 |
liver parenchyma | 1.83e-14 | 3 |
liver lobule | 1.83e-14 | 3 |
hepatic duct | 1.83e-14 | 3 |
bile duct | 6.78e-08 | 6 |
digestive system duct | 6.78e-08 | 6 |
trunk blood vessel | 6.04e-07 | 7 |
gland | 8.00e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 2.94e-14 | 11 |
endocrine gland cancer | 5.54e-08 | 6 |