FFCP PHASE1:Hg19::chr4:111536708..111536738,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-94bp_to_ENST00000513690_5end | |||
|cluster_id=chr4:111536708..111536738,- | |||
|coexpression_cluster_id=C4360 | |||
|description=CAGE_peak_1_at_ENST00000513690_5end | |||
|id=chr4:111536708..111536738,- | |||
|ontology_enrichment_celltype=CL:0002322!1.29e-12!5;CL:0002621!5.96e-08!3;CL:0002569!8.78e-08!6;CL:1000507!8.82e-07!12;CL:1000494!8.82e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002569;2.38e-13;6!CL:0002367;5.75e-11;2!CL:0002363;2.72e-10;2!CL:0002588;2.72e-10;2!CL:0002322;7.02e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002569,1.90e-13,6;CL:0002367,6.35e-11,2;CL:0002588,2.25e-10,2;CL:0002363,2.86e-10,2;CL:0000008,2.86e-10,2;CL:0002322,7.12e-09,5 | |||
|ontology_enrichment_development_v019=CL:0000008;2.72e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000020!8.50e-10!23;UBERON:0001032!2.68e-09!24;UBERON:0004456!2.68e-09!24;UBERON:0003103!1.82e-08!69;UBERON:0001949!5.96e-08!3;UBERON:0003422!8.78e-08!6;UBERON:0000481!2.00e-07!347;UBERON:0000970!2.67e-07!20;UBERON:0002331!6.16e-07!10;UBERON:0000358!6.16e-07!10;UBERON:0000307!6.16e-07!10;UBERON:0000091!6.16e-07!10;UBERON:0000087!6.16e-07!10;UBERON:0007806!6.16e-07!10;UBERON:0008780!6.16e-07!10;UBERON:0005728!6.16e-07!10;UBERON:0002104!6.97e-07!21;UBERON:0009773!8.82e-07!12;UBERON:0001231!8.82e-07!12;UBERON:0004810!8.82e-07!12;UBERON:0000007!9.52e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003422;2.38e-13;6!UBERON:0000020;1.81e-12;23!UBERON:0002331;2.79e-12;10!UBERON:0001032;6.75e-12;24!UBERON:0004456;6.75e-12;24!UBERON:0003104;1.86e-11;7!UBERON:0009142;1.86e-11;7!UBERON:0000007;4.96e-11;2!UBERON:0003891;5.58e-11;4!UBERON:0005969;5.75e-11;2!UBERON:0003956;5.75e-11;2!UBERON:0003566;2.72e-10;2!UBERON:0001777;2.72e-10;2!UBERON:0000970;2.51e-08;20!UBERON:0002104;6.70e-08;21!UBERON:0001723;1.81e-07;3!UBERON:0001033;1.81e-07;3!UBERON:0000478;8.75e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003422,1.90e-13,6;UBERON:0002331,2.34e-12,10;UBERON:0000358,2.34e-12,10;UBERON:0000307,2.34e-12,10;UBERON:0000091,2.34e-12,10;UBERON:0000087,2.34e-12,10;UBERON:0007010,2.34e-12,10;UBERON:0007806,2.34e-12,10;UBERON:0008780,2.34e-12,10;UBERON:0005728,2.34e-12,10;UBERON:0000020,6.81e-12,24;UBERON:0001032,6.81e-12,24;UBERON:0004456,6.81e-12,24;UBERON:0000007,4.96e-11,2;UBERON:0005969,6.35e-11,2;UBERON:0003956,6.35e-11,2;UBERON:0003891,7.01e-11,4;UBERON:0003566,2.86e-10,2;UBERON:0001777,2.86e-10,2;UBERON:0000970,6.92e-08,21;UBERON:0002104,6.92e-08,21;UBERON:0001723,1.69e-07,3;UBERON:0001033,1.69e-07,3;UBERON:0010056,1.69e-07,3;UBERON:0000478,7.68e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.937285727335186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0411514204703,0,0,0,0.193260853163297,1.09098448236334,0.573609190778008,0.121973706129595,0.662648841607426,3.137236457477,1.34759371519982,1.51392510525377,2.18986415445498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,2.77765335475589,3.9096996637239,1.03993478527958,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,1.00789276919316,0.850650583454319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80980402060889,0,0,0,0,0,0,0,0,15.1934049509604,8.23240336780769,0,0,4.75171123760058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0.451199612907412,0.15403067420883,3.13739907670742,0,0.422206515571503,0,0,0,0,0,1.00337954770971,0.254876273045038,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,3.44187245289724,1.67023369722306,0,0,0,0,4.17420491142287,7.34862912514464,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69682656402951,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26598838716816,0,0,0,0.995261931078505,0.796118080530053,3.05515072466813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83836228250648,0,0,0,0,5.41652671550293,0,0,0,0,0.0969890164884194,0,15.5926711138567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.1804393055971,0,0,0,0,0,4.56847612909739,0,0,0,0,0,0,0,0,0,4.66184130548556,0.412618309791701,0,0,0,0,0,0.394028536495991,0.83927341015997,0,0,0,45.0258055615221,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36107831386915,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.06965604236632,5.91921697513374,1.77404740325278,0,0.342976018874837,0,0,0,0,0.156986185701028,0,0,0,0,0,33.1651164979685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,1.62065732026684,8.96094198066225,0,0.735444965261716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0,0,0,8.07465118944505,0.109265571963696,16.5975036324982,0,0,0.275684698604535,0,0.378893491091197,0,0,0,0,0,0,0,0,0.0636471582781649,0,6.7492191848058,3.76456631193809,0,0.143444410785353,0,0,0,0,0,23.4640942403454,0,0,0,0,0 | |||
|short_description=p1@ENST00000513690 | |||
}} |
Latest revision as of 00:55, 30 July 2015
Short description: | p1@ENST00000513690 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000513690_5end |
Coexpression cluster: | C4360_left_retina_heart_umbilical_Mesenchymal_eye_teratocarcinoma |
Association with transcript: | -94bp_to_ENST00000513690_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 1.90e-13 | 6 |
trabecular meshwork cell | 6.35e-11 | 2 |
smooth muscle cell of the umbilical vein | 2.25e-10 | 2 |
keratocyte | 2.86e-10 | 2 |
migratory cranial neural crest cell | 2.86e-10 | 2 |
embryonic stem cell | 7.12e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
mesenchyme of umbilical cord | 1.90e-13 | 6 |
umbilical cord | 2.34e-12 | 10 |
blastocyst | 2.34e-12 | 10 |
blastula | 2.34e-12 | 10 |
bilaminar disc | 2.34e-12 | 10 |
inner cell mass | 2.34e-12 | 10 |
cleaving embryo | 2.34e-12 | 10 |
connecting stalk | 2.34e-12 | 10 |
inner cell mass derived epiblast | 2.34e-12 | 10 |
extraembryonic mesoderm | 2.34e-12 | 10 |
sense organ | 6.81e-12 | 24 |
sensory system | 6.81e-12 | 24 |
entire sense organ system | 6.81e-12 | 24 |
pituitary gland | 4.96e-11 | 2 |
reticulum trabeculare | 6.35e-11 | 2 |
aqueous drainage system | 6.35e-11 | 2 |
stroma | 7.01e-11 | 4 |
head connective tissue | 2.86e-10 | 2 |
substantia propria of cornea | 2.86e-10 | 2 |
eye | 6.92e-08 | 21 |
visual system | 6.92e-08 | 21 |
tongue | 1.69e-07 | 3 |
gustatory system | 1.69e-07 | 3 |
future tongue | 1.69e-07 | 3 |
extraembryonic structure | 7.68e-07 | 24 |