FFCP PHASE1:Hg19::chr4:75196177..75196198,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=56bp_to_ENST00000513776,uc003hhv.1_5end | |association_with_transcript=56bp_to_ENST00000513776,uc003hhv.1_5end | ||
|cluster_id=chr4:75196177..75196198,- | |||
|coexpression_cluster_id=C565 | |coexpression_cluster_id=C565 | ||
|description=CAGE_peak_1_at_ENST00000513776_5end,CAGE_peak_1_at_uc003hhv.1_5end | |description=CAGE_peak_1_at_ENST00000513776_5end,CAGE_peak_1_at_uc003hhv.1_5end | ||
|id=chr4:75196177..75196198,- | |id=chr4:75196177..75196198,- | ||
|ontology_enrichment_celltype=CL:0000860;4.77e-71;33!CL:0002057;4.77e-71;33!CL:0000473;7.93e-47;39!CL:0000234;7.93e-47;39!CL:0000576;1.08e-31;48!CL:0000763;1.43e-27;100!CL:0000766;2.33e-17;69!CL:0002087;1.23e-08;104!CL:0000988;1.36e-07;177 | |ontology_enrichment_celltype=CL:0002057!2.71e-67!42;CL:0000763!1.36e-64!112;CL:0000049!1.36e-64!112;CL:0000860!4.11e-62!45;CL:0000037!2.22e-50!172;CL:0000566!2.22e-50!172;CL:0000988!9.80e-47!182;CL:0002032!1.01e-45!165;CL:0000837!1.01e-45!165;CL:0002009!5.38e-44!65;CL:0000766!2.35e-43!76;CL:0002194!3.84e-43!63;CL:0000576!3.84e-43!63;CL:0000040!3.84e-43!63;CL:0000559!3.84e-43!63;CL:0000839!1.25e-42!70;CL:0000557!5.92e-42!71;CL:0000738!5.23e-29!140;CL:0002087!8.12e-28!119;CL:0002031!2.55e-26!124;CL:0000134!1.09e-16!358;CL:0002320!4.62e-16!365;CL:0000219!7.46e-14!390;CL:0000034!2.90e-13!444;CL:0000048!7.49e-12!430;CL:0000723!1.81e-11!436;CL:0000842!1.86e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;4.77e-71;33!CL:0002057;4.77e-71;33!CL:0000473;7.93e-47;39!CL:0000234;7.93e-47;39!CL:0000576;1.08e-31;48!CL:0000763;1.43e-27;100!CL:0000766;2.33e-17;69!CL:0002087;1.23e-08;104!CL:0000988;1.36e-07;177 | ||
|ontology_enrichment_disease=DOID:8692;6.85e-21;31!DOID:1036;1.08e-19;8!DOID:1240;2.07e-13;39!DOID:2531;2.89e-09;51!DOID:0060083;2.89e-09;51 | |ontology_enrichment_celltype_v019_2=CL:0000763,1.27e-59,108;CL:0000049,1.27e-59,108;CL:0000860,6.78e-59,42;CL:0002057,6.78e-59,42;CL:0000473,8.69e-51,48;CL:0000234,8.69e-51,48;CL:0002194,1.95e-39,59;CL:0000576,1.95e-39,59;CL:0000040,1.95e-39,59;CL:0000559,1.95e-39,59;CL:0002009,5.68e-38,61;CL:0000037,1.01e-37,168;CL:0002032,2.13e-37,161;CL:0000837,2.13e-37,161;CL:0000557,4.17e-37,67;CL:0000766,4.89e-37,72;CL:0000988,2.17e-35,177;CL:0000839,1.08e-34,66;CL:0002087,1.51e-17,115;CL:0000738,8.64e-17,136;CL:0002031,1.39e-16,120;CL:0000134,1.80e-13,354;CL:0002320,4.82e-13,361;CL:0000034,9.86e-12,441;CL:0000219,1.56e-11,386;CL:0000048,1.10e-09,427;CL:0000723,1.98e-09,433 | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019=CL:0002057;2.55e-42;42!CL:0000049;7.39e-18;108 | ||
|ontology_enrichment_disease=DOID:8692!3.77e-14!31;DOID:1240!4.96e-12!39;DOID:1036!5.01e-12!8;DOID:2531!1.56e-09!51;DOID:0060083!1.56e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;6.85e-21;31!DOID:1036;1.08e-19;8!DOID:1240;2.07e-13;39!DOID:2531;2.89e-09;51!DOID:0060083;2.89e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.05e-21,31;DOID:1036,1.38e-19,8;DOID:1240,1.17e-16,39;DOID:2531,4.52e-12,51;DOID:0060083,4.52e-12,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.26e-40!102;UBERON:0003061!1.26e-40!102;UBERON:0002371!1.60e-38!80;UBERON:0002193!6.55e-36!112;UBERON:0001474!4.25e-35!86;UBERON:0004765!2.56e-28!101;UBERON:0001434!2.56e-28!101;UBERON:0002405!1.41e-26!115;UBERON:0002384!3.31e-15!375;UBERON:0002204!5.96e-14!167;UBERON:0003081!6.57e-13!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.21e-35,76;UBERON:0001474,5.11e-32,82;UBERON:0004765,1.21e-28,90;UBERON:0002405,1.58e-27,93;UBERON:0002390,8.13e-26,98;UBERON:0003061,8.13e-26,98;UBERON:0001434,3.52e-25,100;UBERON:0002193,7.24e-23,108;UBERON:0002204,1.19e-12,167;UBERON:0002384,1.85e-12,371;UBERON:0003081,2.37e-09,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0,0,0,0,0,0,56.3712843522907,0,0,0.651032612147555,0,0,0,1.89017710413434,1.88937971844405,1.21292030593908,5.34586784883075,0.411167888021826,2.78735733805593,4.60307827715441,1.7931249457037,1.41889337933151,2.41321976515633,0.645484683583826,2.70852973188684,3.38836211176688,3.547779950752,7.19115150224271,7.65209730927256,2.88836124368484,6.39337125799041,0.659702600373432,0.797854630486527,1.70489900213078,3.48251086354301,2.8369261234557,10.5879782329248,2.76373531782418,0.521482918420201,1.95469960234605,4.23779651843358,2.57794345191295,6.64571013625857,0,0.425208599930087,0,0,0.150176892841506,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0.661044872784862,0,0,0,0,67.4073775753032,28.0254281490768,24.4947198840822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,3.06408592211787,0,0,42.1195767170188,0,0,7.51903431270201,0.677167111206413,0,4.237793851012,0,0,0,0,0,0,0,2.46174797895425,19.7432645287468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.15529204750391,2.70714792740617,3.33306308340157,3.02078856556517,2.46679852541441,10.489814212705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397429223405979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.12715955418456,0,0,0,1.32506888912221,0,0,0,0,0.640724475406168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0,0,0,0,0,0,56.3712843522907,0,0,0.651032612147555,0,0,0,1.89017710413434,1.88937971844405,1.21292030593908,5.34586784883075,0.411167888021826,2.78735733805593,4.60307827715441,1.7931249457037,1.41889337933151,2.41321976515633,0.645484683583826,2.70852973188684,3.38836211176688,3.547779950752,7.19115150224271,7.65209730927256,2.88836124368484,6.39337125799041,0.659702600373432,0.797854630486527,1.70489900213078,3.48251086354301,2.8369261234557,10.5879782329248,2.76373531782418,0.521482918420201,1.95469960234605,4.23779651843358,2.57794345191295,6.64571013625857,0,0.425208599930087,0,0,0.150176892841506,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0.661044872784862,0,0,0,0,67.4073775753032,28.0254281490768,24.4947198840822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,3.06408592211787,0,0,42.1195767170188,0,0,7.51903431270201,0.677167111206413,0,4.237793851012,0,0,0,0,0,0,0,2.46174797895425,19.7432645287468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.15529204750391,2.70714792740617,3.33306308340157,3.02078856556517,2.46679852541441,10.489814212705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397429223405979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.12715955418456,0,0,0,1.32506888912221,0,0,0,0,0.640724475406168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000513776,p1@uc003hhv.1 | |short_description=p1@ENST00000513776,p1@uc003hhv.1 | ||
}} | }} |
Latest revision as of 06:49, 30 July 2015
Short description: | p1@ENST00000513776, p1@uc003hhv.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000513776_5end, CAGE_peak_1_at_uc003hhv.1_5end |
Coexpression cluster: | C565_CD34_CD133_acute_thymus_Hodgkin_Burkitt_testis |
Association with transcript: | 56bp_to_ENST00000513776, uc003hhv.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.27e-59 | 108 |
common myeloid progenitor | 1.27e-59 | 108 |
classical monocyte | 6.78e-59 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.78e-59 | 42 |
defensive cell | 8.69e-51 | 48 |
phagocyte | 8.69e-51 | 48 |
monopoietic cell | 1.95e-39 | 59 |
monocyte | 1.95e-39 | 59 |
monoblast | 1.95e-39 | 59 |
promonocyte | 1.95e-39 | 59 |
macrophage dendritic cell progenitor | 5.68e-38 | 61 |
hematopoietic stem cell | 1.01e-37 | 168 |
hematopoietic oligopotent progenitor cell | 2.13e-37 | 161 |
hematopoietic multipotent progenitor cell | 2.13e-37 | 161 |
granulocyte monocyte progenitor cell | 4.17e-37 | 67 |
myeloid leukocyte | 4.89e-37 | 72 |
hematopoietic cell | 2.17e-35 | 177 |
myeloid lineage restricted progenitor cell | 1.08e-34 | 66 |
nongranular leukocyte | 1.51e-17 | 115 |
leukocyte | 8.64e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 1.39e-16 | 120 |
mesenchymal cell | 1.80e-13 | 354 |
connective tissue cell | 4.82e-13 | 361 |
stem cell | 9.86e-12 | 441 |
motile cell | 1.56e-11 | 386 |
multi fate stem cell | 1.10e-09 | 427 |
somatic stem cell | 1.98e-09 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.21e-35 | 76 |
bone element | 5.11e-32 | 82 |
skeletal element | 1.21e-28 | 90 |
immune system | 1.58e-27 | 93 |
hematopoietic system | 8.13e-26 | 98 |
blood island | 8.13e-26 | 98 |
skeletal system | 3.52e-25 | 100 |
hemolymphoid system | 7.24e-23 | 108 |
musculoskeletal system | 1.19e-12 | 167 |
connective tissue | 1.85e-12 | 371 |
lateral plate mesoderm | 2.37e-09 | 203 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.05e-21 | 31 |
chronic leukemia | 1.38e-19 | 8 |
leukemia | 1.17e-16 | 39 |
hematologic cancer | 4.52e-12 | 51 |
immune system cancer | 4.52e-12 | 51 |