FFCP PHASE1:Hg19::chr4:97091584..97091602,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr4:97091584..97091602,+ to FFCP PHASE1:Hg19::chr4:97091584..97091602,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:97091584..97091602,+ | |||
|description=CAGE_peak_at_chr4:97091584..97091602,+ | |||
|id=chr4:97091584..97091602,+ | |||
|ontology_enrichment_celltype=CL:0000039!2.88e-28!7;CL:0000586!2.88e-28!7;CL:0000313!3.52e-07!1;CL:0002127!6.60e-07!1;CL:0000914!6.60e-07!1;CL:0000911!6.60e-07!1;CL:0000814!6.60e-07!1;CL:0002042!6.60e-07!1;CL:0002039!6.60e-07!1;CL:0002040!6.60e-07!1;CL:0002041!6.60e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000039;7.14e-18;7!CL:0000586;7.14e-18;7!CL:0000313;3.87e-09;1!CL:0002127;9.02e-09;1!CL:0000911;9.02e-09;1!CL:0000814;9.02e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,7.30e-18,7;CL:0000586,7.30e-18,7;CL:0000313,3.87e-09,1;CL:0002127,9.02e-09,1;CL:0000914,9.02e-09,1;CL:0000911,9.02e-09,1;CL:0000814,9.02e-09,1;CL:0002042,9.02e-09,1;CL:0002039,9.02e-09,1;CL:0002040,9.02e-09,1;CL:0002041,9.02e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.16e-18;10!UBERON:0005564;1.16e-18;10!UBERON:0003124;1.27e-08;1 | |||
|ontology_enrichment_disease=DOID:3095!1.30e-11!22;DOID:2994!1.30e-11!22;DOID:162!2.14e-11!235;DOID:1036!4.20e-11!8;DOID:14566!4.84e-11!239;DOID:2531!6.94e-09!51;DOID:0060083!6.94e-09!51;DOID:1240!7.95e-08!39;DOID:0050686!8.16e-08!137;DOID:2152!3.52e-07!1;DOID:1799!4.97e-07!1;DOID:10165!4.97e-07!1;DOID:1798!4.97e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.15e-14;8!DOID:1240;9.75e-10;39!DOID:2531;2.16e-09;51!DOID:0060083;2.16e-09;51!DOID:2152;3.87e-09;1!DOID:1799;6.16e-09;1!DOID:10165;6.16e-09;1!DOID:1798;6.16e-09;1!DOID:3095;1.40e-08;22!DOID:2994;1.40e-08;22!DOID:0060085;1.84e-08;1!DOID:3165;1.84e-08;1!DOID:0060121;1.84e-08;1!DOID:2438;1.84e-08;1!DOID:4418;1.84e-08;1!DOID:8692;2.53e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,9.95e-15,8;DOID:162,1.14e-12,235;DOID:14566,2.54e-12,239;DOID:1240,6.22e-11,39;DOID:2531,3.14e-10,51;DOID:0060083,3.14e-10,51;DOID:0050686,3.37e-09,137;DOID:2152,3.87e-09,1;DOID:1799,6.16e-09,1;DOID:10165,6.16e-09,1;DOID:1798,6.16e-09,1;DOID:3095,1.41e-08,22;DOID:2994,1.41e-08,22;DOID:0060085,1.65e-08,1;DOID:3165,1.65e-08,1;DOID:0060121,1.65e-08,1;DOID:2438,1.65e-08,1;DOID:4418,1.65e-08,1;DOID:8692,4.56e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0000473!4.94e-17!8;UBERON:0003135!2.49e-12!11;UBERON:0000991!5.67e-09!21;UBERON:0009196!5.67e-09!21;UBERON:0009117!5.67e-09!21;UBERON:0005564!5.67e-09!21;UBERON:0004176!1.55e-08!22;UBERON:0003133!8.13e-08!48;UBERON:0004911!3.52e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.86e-15;8!UBERON:0003135;4.63e-11;11!UBERON:0004911;3.87e-09;1!UBERON:0000991;8.50e-09;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.30e-15,8;UBERON:0003135,5.01e-11,11;UBERON:0004911,3.87e-09,1;UBERON:0003133,8.09e-09,48;UBERON:0000991,8.94e-09,21;UBERON:0009196,8.94e-09,21;UBERON:0009117,8.94e-09,21;UBERON:0005564,8.94e-09,21;UBERON:0004176,2.29e-08,22;UBERON:0002323,3.27e-07,46;UBERON:0005156,5.68e-07,59;UBERON:0000990,5.68e-07,59 | |||
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|short_description=p@chr4:97091584..97091602,+ | |||
}} | }} |
Latest revision as of 08:13, 30 July 2015
Short description: | p@chr4:97091584..97091602, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:97091584..97091602, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 7.30e-18 | 7 |
germ cell | 7.30e-18 | 7 |
serous secreting cell | 3.87e-09 | 1 |
innate effector T cell | 9.02e-09 | 1 |
immature NK T cell | 9.02e-09 | 1 |
effector T cell | 9.02e-09 | 1 |
mature NK T cell | 9.02e-09 | 1 |
immature NK T cell stage IV | 9.02e-09 | 1 |
immature NK T cell stage I | 9.02e-09 | 1 |
immature NK T cell stage II | 9.02e-09 | 1 |
immature NK T cell stage III | 9.02e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 4.30e-15 | 8 |
male reproductive organ | 5.01e-11 | 11 |
epithelium of female gonad | 3.87e-09 | 1 |
reproductive organ | 8.09e-09 | 48 |
gonad | 8.94e-09 | 21 |
indifferent external genitalia | 8.94e-09 | 21 |
indifferent gonad | 8.94e-09 | 21 |
gonad primordium | 8.94e-09 | 21 |
external genitalia | 2.29e-08 | 22 |
body cavity | 3.27e-07 | 46 |
reproductive structure | 5.68e-07 | 59 |
reproductive system | 5.68e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 9.95e-15 | 8 |
cancer | 1.14e-12 | 235 |
disease of cellular proliferation | 2.54e-12 | 239 |
leukemia | 6.22e-11 | 39 |
hematologic cancer | 3.14e-10 | 51 |
immune system cancer | 3.14e-10 | 51 |
organ system cancer | 3.37e-09 | 137 |
ovary epithelial cancer | 3.87e-09 | 1 |
islet cell tumor | 6.16e-09 | 1 |
endocrine pancreas cancer | 6.16e-09 | 1 |
pancreatic endocrine carcinoma | 6.16e-09 | 1 |
germ cell and embryonal cancer | 1.41e-08 | 22 |
germ cell cancer | 1.41e-08 | 22 |
organ system benign neoplasm | 1.65e-08 | 1 |
skin benign neoplasm | 1.65e-08 | 1 |
integumentary system benign neoplasm | 1.65e-08 | 1 |
dermis tumor | 1.65e-08 | 1 |
cutaneous fibrous histiocytoma | 1.65e-08 | 1 |
myeloid leukemia | 4.56e-08 | 31 |