FFCP PHASE1:Hg19::chr4:97091624..97091635,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:97091624..97091635,+ | |||
|description=CAGE_peak_at_chr4:97091624..97091635,+ | |description=CAGE_peak_at_chr4:97091624..97091635,+ | ||
|id=chr4:97091624..97091635,+ | |id=chr4:97091624..97091635,+ | ||
|ontology_enrichment_celltype=CL:0000039!5.64e-22!7;CL:0000586!5.64e-22!7;CL:0000313!1.06e-07!1;CL:0002127!1.44e-07!1;CL:0000914!1.44e-07!1;CL:0000911!1.44e-07!1;CL:0000814!1.44e-07!1;CL:0002042!1.44e-07!1;CL:0002039!1.44e-07!1;CL:0002040!1.44e-07!1;CL:0002041!1.44e-07!1 | |ontology_enrichment_celltype=CL:0000039!5.64e-22!7;CL:0000586!5.64e-22!7;CL:0000313!1.06e-07!1;CL:0002127!1.44e-07!1;CL:0000914!1.44e-07!1;CL:0000911!1.44e-07!1;CL:0000814!1.44e-07!1;CL:0002042!1.44e-07!1;CL:0002039!1.44e-07!1;CL:0002040!1.44e-07!1;CL:0002041!1.44e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000039;5.69e-29;7!CL:0000586;5.69e-29;7!CL:0000313;3.28e-14;1!CL:0002127;5.85e-14;1!CL:0000911;5.85e-14;1!CL:0000814;5.85e-14;1!CL:0000159;9.55e-08;2!CL:1000415;1.99e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.43e-29,7;CL:0000586,4.43e-29,7;CL:0000313,3.50e-14,1;CL:0002127,6.65e-14,1;CL:0000914,6.65e-14,1;CL:0000911,6.65e-14,1;CL:0000814,6.65e-14,1;CL:0002042,6.65e-14,1;CL:0002039,6.65e-14,1;CL:0002040,6.65e-14,1;CL:0002041,6.65e-14,1;CL:0000159,9.87e-08,2;CL:0000893,1.36e-07,2;CL:0002489,1.36e-07,2;CL:0000809,1.36e-07,2;CL:0000808,1.36e-07,2;CL:0000894,1.36e-07,2;CL:0000806,1.36e-07,2;CL:0000807,1.36e-07,2;CL:0000805,1.36e-07,2;CL:0002425,1.36e-07,2;CL:1000415,1.87e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.73e-12;10!UBERON:0005564;4.73e-12;10!CL:0002425;1.27e-07;2 | |||
|ontology_enrichment_disease=DOID:1036!9.86e-12!8;DOID:162!8.72e-10!235;DOID:3095!1.28e-09!22;DOID:2994!1.28e-09!22;DOID:14566!1.76e-09!239;DOID:2531!7.02e-08!51;DOID:0060083!7.02e-08!51;DOID:2152!1.06e-07!1;DOID:1799!1.27e-07!1;DOID:10165!1.27e-07!1;DOID:1798!1.27e-07!1;DOID:0060085!2.67e-07!1;DOID:3165!2.67e-07!1;DOID:0060121!2.67e-07!1;DOID:2438!2.67e-07!1;DOID:4418!2.67e-07!1;DOID:4960!3.41e-07!1;DOID:0070004!3.41e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.64e-14;22!DOID:2994;2.64e-14;22!DOID:2152;3.28e-14;1!DOID:1799;5.85e-14;1!DOID:10165;5.85e-14;1!DOID:1798;5.85e-14;1!DOID:305;3.41e-08;106!DOID:120;1.26e-07;27!DOID:4468;1.99e-07;2!DOID:193;4.11e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.39e-14,22;DOID:2994,2.39e-14,22;DOID:2152,3.50e-14,1;DOID:1799,5.15e-14,1;DOID:10165,5.15e-14,1;DOID:1798,5.15e-14,1;DOID:0050687,3.82e-13,143;DOID:305,7.35e-13,106;DOID:162,9.76e-12,235;DOID:14566,1.87e-11,239;DOID:120,1.36e-07,27;DOID:4468,2.12e-07,2;DOID:193,4.43e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.92e-12!8;UBERON:0003135!7.44e-09!11;UBERON:0004911!1.06e-07!1;UBERON:0000991!5.50e-07!21;UBERON:0009196!5.50e-07!21;UBERON:0009117!5.50e-07!21;UBERON:0005564!5.50e-07!21;UBERON:0003133!7.74e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;3.28e-14;1!UBERON:0004909;9.55e-08;2!UBERON:0000473;2.95e-07;8!UBERON:0003133;6.49e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,3.50e-14,1;UBERON:0004909,9.87e-08,2;UBERON:0000473,2.95e-07,8;UBERON:0002323,8.68e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37132061574756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71752672377882,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.69169171316418,1.88491053260521,8.69178975376064,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.503464760927528,0.37950746544837,0,1.47698645169619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9845336444171,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794858446811959,0,0,1.68333522528221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790446527591777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97622719514703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.16544652123884,0,0,0,0,0,0,1.16969731731053,0,0,0,0,1.66059127923341,0,0,0,0,0,0,0,0,0,0,0,0,2.49975514047921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.20822654956041,0,0,4.87042967534678,5.0141507858475,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37132061574756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71752672377882,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.69169171316418,1.88491053260521,8.69178975376064,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.503464760927528,0.37950746544837,0,1.47698645169619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9845336444171,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794858446811959,0,0,1.68333522528221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790446527591777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97622719514703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.16544652123884,0,0,0,0,0,0,1.16969731731053,0,0,0,0,1.66059127923341,0,0,0,0,0,0,0,0,0,0,0,0,2.49975514047921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.20822654956041,0,0,4.87042967534678,5.0141507858475,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:97091624..97091635,+ | |short_description=p@chr4:97091624..97091635,+ | ||
}} | }} |
Latest revision as of 08:13, 30 July 2015
Short description: | p@chr4:97091624..97091635, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:97091624..97091635, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.43e-29 | 7 |
germ cell | 4.43e-29 | 7 |
serous secreting cell | 3.50e-14 | 1 |
innate effector T cell | 6.65e-14 | 1 |
immature NK T cell | 6.65e-14 | 1 |
effector T cell | 6.65e-14 | 1 |
mature NK T cell | 6.65e-14 | 1 |
immature NK T cell stage IV | 6.65e-14 | 1 |
immature NK T cell stage I | 6.65e-14 | 1 |
immature NK T cell stage II | 6.65e-14 | 1 |
immature NK T cell stage III | 6.65e-14 | 1 |
seromucus secreting cell | 9.87e-08 | 2 |
thymocyte | 1.36e-07 | 2 |
double negative thymocyte | 1.36e-07 | 2 |
double-positive, alpha-beta thymocyte | 1.36e-07 | 2 |
DN4 thymocyte | 1.36e-07 | 2 |
DN1 thymic pro-T cell | 1.36e-07 | 2 |
DN2 thymocyte | 1.36e-07 | 2 |
DN3 thymocyte | 1.36e-07 | 2 |
immature single positive thymocyte | 1.36e-07 | 2 |
early T lineage precursor | 1.36e-07 | 2 |
epithelial cell of gall bladder | 1.87e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 3.50e-14 | 1 |
epithelium of gonad | 9.87e-08 | 2 |
testis | 2.95e-07 | 8 |
body cavity | 8.68e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.39e-14 | 22 |
germ cell cancer | 2.39e-14 | 22 |
ovary epithelial cancer | 3.50e-14 | 1 |
islet cell tumor | 5.15e-14 | 1 |
endocrine pancreas cancer | 5.15e-14 | 1 |
pancreatic endocrine carcinoma | 5.15e-14 | 1 |
cell type cancer | 3.82e-13 | 143 |
carcinoma | 7.35e-13 | 106 |
cancer | 9.76e-12 | 235 |
disease of cellular proliferation | 1.87e-11 | 239 |
female reproductive organ cancer | 1.36e-07 | 27 |
clear cell adenocarcinoma | 2.12e-07 | 2 |
reproductive organ cancer | 4.43e-07 | 29 |